ggKbase home page

L2_026_092G1_scaffold_116

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_092G1_scaffold_116_1
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

74..700
DNA (627bp) protein (209aa)
DNA repair protein n=1 Tax=Bacteroides sp. 2_1_7 RepID=UPI0001B4A987
RadC-like JAB domain protein {ECO:0000313|EMBL:KDS59832.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
DNA repair protein RadC
L2_026_092G1_scaffold_116_2
unknown

Not on your lists

669..866
DNA (198bp) protein (66aa)

This feature has no annotations

L2_026_092G1_scaffold_116_3
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

878..1288
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6BA29_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN32971.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L2_026_092G1_scaffold_116_4
unknown

Not on your lists

1605..1772
DNA (168bp) protein (56aa)

This feature has no annotations

L2_026_092G1_scaffold_116_5
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2031..3908)
DNA (1878bp) protein (626aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6AY69_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN32969.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
putative lipoprotein
L2_026_092G1_scaffold_116_6
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3946..7374)
DNA (3429bp) protein (1143aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Parabacteroides sp. D25 RepID=K6BXH3_9PORP
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EKN32968.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
TonB-linked outer membrane protein, SusC/RagA family
L2_026_092G1_scaffold_116_7
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7760..10048
DNA (2289bp) protein (763aa)
malic enzyme (EC:1.1.1.40)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6A126_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN32967.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
L2_026_092G1_scaffold_116_8
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10160..11053)
DNA (894bp) protein (298aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6B242_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN22113.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
D-3-phosphoglycerate dehydrogenase
L2_026_092G1_scaffold_116_9
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11078..11602)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6BAR2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN32965.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L2_026_092G1_scaffold_116_10
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11653..13059
DNA (1407bp) protein (469aa)
Efflux transporter, outer membrane factor lipoprotein, NodT family n=4 Tax=Bacteroidales RepID=D0TJ33_9BACE
Outer membrane efflux protein OprM {ECO:0000313|EMBL:EFI09178.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
outer membrane efflux protein oprM
L2_026_092G1_scaffold_116_11
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13129..14244
DNA (1116bp) protein (372aa)
Efflux transporter, RND family, MFP subunit n=3 Tax=Parabacteroides RepID=C7X8S4_9PORP
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EKN32963.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
cation efflux pump
L2_026_092G1_scaffold_116_12
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14252..17389
DNA (3138bp) protein (1046aa)
Multidrug efflux pump BpeF n=5 Tax=Bacteroidales RepID=C7X8S3_9PORP
cation efflux pump
Multidrug efflux pump BpeF {ECO:0000313|EMBL:EEU51602.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L2_026_092G1_scaffold_116_13
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17498..17899)
DNA (402bp) protein (134aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
Peptidyl-prolyl cis-trans isomerase n=4 Tax=Parabacteroides RepID=C7X8S2_9PORP
peptidyl-prolyl cis-trans isomerase
L2_026_092G1_scaffold_116_14
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18009..18221
DNA (213bp) protein (71aa)
Uncharacterized protein n=5 Tax=Parabacteroides RepID=C7X8S1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN25814.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L2_026_092G1_scaffold_116_15
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18887..20353
DNA (1467bp) protein (489aa)
Catalase {ECO:0000256|RuleBase:RU000498}; EC=1.11.1.6 {ECO:0000256|RuleBase:RU000498};; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
Catalase n=5 Tax=Bacteroidales RepID=C7X8S0_9PORP
catalase
L2_026_092G1_scaffold_116_16
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20425..20799)
DNA (375bp) protein (125aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=C7X8R9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB49978.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
hypothetical protein
L2_026_092G1_scaffold_116_17
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20799..21773)
DNA (975bp) protein (325aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
fmt; methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=4 Tax=Parabacteroides RepID=C7X8R8_9PORP
L2_026_092G1_scaffold_116_18
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21804..23588)
DNA (1785bp) protein (595aa)
Chloride transporter, ClC family n=7 Tax=Bacteroidales RepID=C7X8R7_9PORP
Chloride transporter, ClC family {ECO:0000313|EMBL:EEY81721.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
chloride channel protein
L2_026_092G1_scaffold_116_19
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23590..24990)
DNA (1401bp) protein (467aa)
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase n=6 Tax=Bacteroidales RepID=C7X8R6_9PORP
glycosyltransferase
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase family protein {ECO:0000313|EMBL:KDS59739.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L2_026_092G1_scaffold_116_20
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24993..25553)
DNA (561bp) protein (187aa)
Uncharacterized protein n=6 Tax=Bacteroidales RepID=A6LCS8_PARD8
translation factor
Uncharacterized protein {ECO:0000313|EMBL:ABR43492.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L2_026_092G1_scaffold_116_21
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25777..27501
DNA (1725bp) protein (575aa)
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:KDS59767.1}; EC=3.1.-.- {ECO:0000313|EMBL:KDS59767.1};; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
Single-stranded-DNA-specific exonuclease RecJ n=6 Tax=Bacteroidales RepID=A6LCS9_PARD8
single-stranded-DNA-specific exonuclease RecJ
L2_026_092G1_scaffold_116_22
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27622..29427
DNA (1806bp) protein (602aa)
RecQ family ATP-dependent DNA helicase n=2 Tax=Bacteroidales RepID=K6BA09_9PORP
RecQ family ATP-dependent DNA helicase {ECO:0000313|EMBL:EKN32951.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
ATP-dependent DNA helicase RecQ
L2_026_092G1_scaffold_116_23
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29525..30436)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6BAQ0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN32950.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L2_026_092G1_scaffold_116_24
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30477..31334)
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6AY55_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN32949.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
transcriptional regulator
L2_026_092G1_scaffold_116_25
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31579..33309)
DNA (1731bp) protein (577aa)
AspT/YidE/YbjL antiporter duplication domain-containing protein n=1 Tax=Parabacteroides sp. D25 RepID=K6BXF5_9PORP
AspT/YidE/YbjL antiporter duplication domain-containing protein {ECO:0000313|EMBL:EKN32948.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L2_026_092G1_scaffold_116_26
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33364..34173
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6A109_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN32947.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
cyclophilin type peptidyl-prolyl cis-trans isomerase
L2_026_092G1_scaffold_116_27
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34186..34575
DNA (390bp) protein (130aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K6BA04_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN32946.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
L2_026_092G1_scaffold_116_28
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34569..35690)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=3 Tax=Bacteroidales RepID=K6BAP5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN32945.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
glycoside hydrolase family protein
L2_026_092G1_scaffold_116_29
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35708..37312)
DNA (1605bp) protein (535aa)
Pyridine nucleotide-disulfide oxidoreductase n=4 Tax=Parabacteroides RepID=C7X8Q6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN32944.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
NAD-utilizing dehydrogenase
L2_026_092G1_scaffold_116_30
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37326..38696)
DNA (1371bp) protein (457aa)
DNA repair protein radA n=4 Tax=Bacteroidales RepID=D0TJ13_9BACE
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
DNA repair protein RadA
Displaying items 1-30 of 67 in total

View Taxonomy