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L2_026_092G1_scaffold_312

Search features with annotation key words

Displaying items 1-30 of 130 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_092G1_scaffold_312_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..359
DNA (357bp) protein (119aa)
Integrase, catalytic region n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GNI1_BIFLS
Integrase, catalytic region
Uncharacterized protein {ECO:0000313|EMBL:CEF13972.1}; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
L2_026_092G1_scaffold_312_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

723..1025
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GRL2_BIFLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACJ52442.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L2_026_092G1_scaffold_312_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1025..2365
DNA (1341bp) protein (447aa)
HipA domain protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GRL1_BIFLS
hypothetical protein
HipA domain protein {ECO:0000313|EMBL:ACJ52441.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L2_026_092G1_scaffold_312_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2343..2609
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GRL0_BIFLS
Uncharacterized protein {ECO:0000313|EMBL:CEF01084.1}; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
hypothetical protein
L2_026_092G1_scaffold_312_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2606..2914
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GRK9_BIFLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACJ52439.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L2_026_092G1_scaffold_312_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2973..4433)
DNA (1461bp) protein (487aa)
Putative transposase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GRK8_BIFLS
putative transposase
Transposase, IS605 OrfB family {ECO:0000313|EMBL:ACJ52438.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L2_026_092G1_scaffold_312_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4553..5656
DNA (1104bp) protein (368aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
Hypothetical phage protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=E8MKA0_BIFLS
phage protein
L2_026_092G1_scaffold_312_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5722..5886
DNA (165bp) protein (55aa)
Uncharacterized protein {ECO:0000313|EMBL:KHD95221.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
L2_026_092G1_scaffold_312_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5887..7098)
DNA (1212bp) protein (404aa)
Phage integrase family protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GRK7_BIFLS
phage integrase family protein
Phage integrase family protein {ECO:0000313|EMBL:ACJ52437.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L2_026_092G1_scaffold_312_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7379..7618)
DNA (240bp) protein (80aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZUD5_BIFLJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH00491.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L2_026_092G1_scaffold_312_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7642..8361)
DNA (720bp) protein (240aa)
Hydrolase or phosphatase n=5 Tax=Bifidobacterium breve RepID=F9Y0D5_BIFBU
Hydrolase or phosphatase
Haloacid dehalogenase-like hydrolase {ECO:0000313|EMBL:ERI86042.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_026_092G1_scaffold_312_12
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8491..8838)
DNA (348bp) protein (116aa)
RNA polymerase-binding protein RbpA n=17 Tax=Bifidobacterium RepID=B3DRZ5_BIFLD
hypothetical protein
RNA polymerase-binding protein RbpA {ECO:0000256|HAMAP-Rule:MF_01483}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L2_026_092G1_scaffold_312_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8952..11543)
DNA (2592bp) protein (864aa)
DEAD/DEAH box helicase n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GXC0_BIFLN
DEAD/DEAH box helicase {ECO:0000313|EMBL:KEY30312.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
DEAD/DEAH box helicase
L2_026_092G1_scaffold_312_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11556..11873)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GR31_BIFLS
Uncharacterized protein {ECO:0000313|EMBL:KEY30313.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
hypothetical protein
L2_026_092G1_scaffold_312_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11884..13797)
DNA (1914bp) protein (638aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum RepID=B7GR30_BIFLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEI80101.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L2_026_092G1_scaffold_312_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13937..15466)
DNA (1530bp) protein (510aa)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000313|EMBL:ACJ52259.1}; EC=2.7.7.9 {ECO:0000313|EMBL:ACJ52259.1};; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GR29_BIFLS
UTP-glucose-1-phosphate uridylyltransferase
L2_026_092G1_scaffold_312_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16034..16795)
DNA (762bp) protein (254aa)
IstB-like ATP-binding protein n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GX29_BIFLN
IstB-like ATP-binding protein {ECO:0000313|EMBL:EEI80259.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Transposase
L2_026_092G1_scaffold_312_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16792..18258)
DNA (1467bp) protein (489aa)
Uncharacterized protein n=3 Tax=Bifidobacterium longum subsp. longum RepID=C2GX28_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:EEI80258.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Transposase
L2_026_092G1_scaffold_312_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18500..19405
DNA (906bp) protein (302aa)
Transposase for IS3509a n=3 Tax=Bifidobacterium longum RepID=B7GP90_BIFLS
putative transposase
Transposase for IS3509a {ECO:0000313|EMBL:ACJ53485.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L2_026_092G1_scaffold_312_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19664..21793)
DNA (2130bp) protein (710aa)
Bifunctional cytidylate kinase/GTP-binding protein n=5 Tax=Bifidobacterium RepID=F8AQA3_BIFLN
GTPase Der {ECO:0000256|SAAS:SAAS00038180}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
bifunctional cytidylate kinase/GTP-binding protein
L2_026_092G1_scaffold_312_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21790..22560)
DNA (771bp) protein (257aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
Pseudouridine synthase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GR26_BIFLS
pseudouridine synthase
L2_026_092G1_scaffold_312_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22756..23724
DNA (969bp) protein (323aa)
Major intrinsic protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GR25_BIFLS
Glycerol transporter {ECO:0000313|EMBL:KEY30318.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
major intrinsic protein
L2_026_092G1_scaffold_312_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23623..23925)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum (strain DJO10A) RepID=B3DRY7_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD97906.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_026_092G1_scaffold_312_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24074..25711)
DNA (1638bp) protein (546aa)
Bifunctional purine biosynthesis protein PurH n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZUE5_BIFLJ
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
purH; phosphoribosylaminoimidazolecarboxamide formyltransferase
L2_026_092G1_scaffold_312_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25659..27038)
DNA (1380bp) protein (460aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GR23_BIFLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACJ52253.1}; Flags: Precursor;; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L2_026_092G1_scaffold_312_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27058..27969)
DNA (912bp) protein (304aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GR22_BIFLS
succinyl-CoA synthase subunit alpha
Succinyl-CoA synthetase, alpha subunit {ECO:0000313|EMBL:ACJ52252.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L2_026_092G1_scaffold_312_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27969..29171)
DNA (1203bp) protein (401aa)
succinate--CoA ligase (EC:6.2.1.5)
Succinate--CoA ligase (ADP-forming) n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GR21_BIFLS
Succinyl-CoA synthetase subunit beta {ECO:0000313|EMBL:KEY30322.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
L2_026_092G1_scaffold_312_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29268..29849)
DNA (582bp) protein (194aa)
Adenine phosphoribosyltransferase {ECO:0000255|HAMAP-Rule:MF_00004}; Short=APRT {ECO:0000255|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000255|HAMAP-Rule:MF_00004};; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
Adenine phosphoribosyltransferase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=APT_BIFLS
adenine phosphoribosyltransferase
L2_026_092G1_scaffold_312_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29901..30347)
DNA (447bp) protein (149aa)
Preprotein translocase YajC subunit n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GR19_BIFLS
hypothetical protein
Preprotein translocase YajC subunit {ECO:0000313|EMBL:ACJ52249.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L2_026_092G1_scaffold_312_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30410..31474)
DNA (1065bp) protein (355aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=RUVB_BIFLS
ruvB; Holliday junction DNA helicase RuvB
Displaying items 1-30 of 130 in total

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