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L2_026_092G1_scaffold_385

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_092G1_scaffold_385_1
Clostridium tyrobutyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..296)
DNA (294bp) protein (98aa)
Type I restriction-modification system, restriction subunit R {ECO:0000313|EMBL:CDL90890.1}; EC=3.1.21.3 {ECO:0000313|EMBL:CDL90890.1};; TaxID=1408889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tyrobutyricum DIVETGP.;"
DEAD/DEAH box helicase n=1 Tax=Clostridium tyrobutyricum RepID=UPI00035FC6EC
type I site-specific restriction-modification system, R
L2_026_092G1_scaffold_385_2
Desulfitobacterium dichloroeliminans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(293..865)
DNA (573bp) protein (191aa)
Type I restriction modification DNA specificity protein n=1 Tax=Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1) RepID=L0F6Y1_DESDL
type I restriction modification DNA specificity protein
Type I restriction modification DNA specificity protein {ECO:0000313|EMBL:AGA68947.1}; TaxID=871963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1).;"
L2_026_092G1_scaffold_385_3
Enterorhabdus caecimuris, Enterorhabdus, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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comp(1005..1637)
DNA (633bp) protein (211aa)
DNA repair protein RadC n=1 Tax=Enterorhabdus caecimuris B7 RepID=R9LDD5_9ACTN
DNA repair protein RadC {ECO:0000313|EMBL:EOS53747.1}; TaxID=1235794 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Enterorhabdus.;" source="Enterorhabdus caecimuris B7.;"
hypothetical protein
L2_026_092G1_scaffold_385_4
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

1804..2727
DNA (924bp) protein (308aa)
Ppx/GppA phosphatase n=1 Tax=Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC 11813 / VPI 0255) RepID=C8WMR8_EGGLE
Ppx/GppA phosphatase
Ppx/GppA phosphatase {ECO:0000313|EMBL:ACV54699.1}; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
L2_026_092G1_scaffold_385_5
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2734..5415
DNA (2682bp) protein (894aa)
Polyphosphate kinase {ECO:0000256|RuleBase:RU003800, ECO:0000256|SAAS:SAAS00008191}; EC=2.7.4.1 {ECO:0000256|RuleBase:RU003800, ECO:0000256|SAAS:SAAS00008191};; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
Polyphosphate kinase n=1 Tax=Eggerthella sp. 1_3_56FAA RepID=E5XAX1_9ACTN
polyphosphate kinase
L2_026_092G1_scaffold_385_6
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5759..6727)
DNA (969bp) protein (323aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SNT9_CLOC7
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ADL49960.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
L2_026_092G1_scaffold_385_7
GWF2_Tenericutes_57_13_curated, Tenericutes, Bacteria

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6891..7355
DNA (465bp) protein (155aa)
id=4041734 bin=GWF2_Firmicute_57_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Firmicute_57_13 organism_group=Firmicute
Tax=GWF2_Tenericutes_57_13_curated
L2_026_092G1_scaffold_385_8
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7166..7612)
DNA (447bp) protein (149aa)
Bacterial mobilisation protein (MobC) n=20 Tax=root RepID=D4L4L6_9FIRM
Bacterial mobilisation protein (MobC).
Mobilization protein {ECO:0000313|EMBL:EGA92923.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L2_026_092G1_scaffold_385_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7814..8176)
DNA (363bp) protein (121aa)
Helix-turn-helix n=20 Tax=root RepID=D4ML35_9FIRM
Helix-turn-helix.
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFH07435.1}; TaxID=525259 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile NAP08.;"
L2_026_092G1_scaffold_385_10
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8771..8956
DNA (186bp) protein (62aa)
23S rRNA m(2)A-2503 methyltransferase (EC:2.1.1.-)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I9B1J5_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIY99015.1}; TaxID=997881 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL05T12C13.;"
L2_026_092G1_scaffold_385_11
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8925..9755
DNA (831bp) protein (277aa)
Uncharacterized protein n=28 Tax=Bacteria RepID=C9YMG8_CLODR
hypothetical protein
23S rRNA methyltransferase {ECO:0000313|EMBL:ERK43599.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
L2_026_092G1_scaffold_385_12
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11212..12546)
DNA (1335bp) protein (445aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
Phosphoglucosamine mutase n=3 Tax=Eggerthella RepID=C8WMR6_EGGLE
phosphoglucosamine mutase
L2_026_092G1_scaffold_385_13
Eggerthella sp. YY7918, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12548..13048)
DNA (501bp) protein (167aa)
Phosphoribosyl-ATP pyrophosphatase {ECO:0000256|SAAS:SAAS00071052}; EC=3.6.1.31 {ECO:0000256|SAAS:SAAS00071044};; TaxID=502558 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. (strain YY7918).;"
Phosphoribosyl-ATP pyrophosphohydrolase n=1 Tax=Eggerthella sp. (strain YY7918) RepID=F7UZJ2_EEGSY
HisI; phosphoribosyl-ATP pyrophosphohydrolase
L2_026_092G1_scaffold_385_14
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(13199..17611)
DNA (4413bp) protein (1471aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
DNA-directed RNA polymerase subunit beta' n=3 Tax=Bacteria RepID=C8WMR4_EGGLE
DNA-directed RNA polymerase subunit beta'
L2_026_092G1_scaffold_385_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17612..21148)
DNA (3537bp) protein (1179aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
DNA-directed RNA polymerase subunit beta n=4 Tax=Bacteria RepID=C8WMR3_EGGLE
DNA-directed RNA polymerase subunit beta
L2_026_092G1_scaffold_385_16
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

21648..23297
DNA (1650bp) protein (550aa)
Putative uncharacterized protein n=1 Tax=Eggerthella sp. HGA1 RepID=F0HJT4_9ACTN
Putative uncharacterized protein {ECO:0000313|EMBL:EGC90411.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
hypothetical protein
L2_026_092G1_scaffold_385_17
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(23547..24449)
DNA (903bp) protein (301aa)
Conserved domain protein n=1 Tax=Eggerthella sp. HGA1 RepID=F0HJT3_9ACTN
Conserved domain protein {ECO:0000313|EMBL:EGC90390.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
hypothetical protein
L2_026_092G1_scaffold_385_18
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

24795..25262
DNA (468bp) protein (156aa)
Transcription activator effector binding n=2 Tax=Eggerthella RepID=C8WMR0_EGGLE
transcription activator effector binding
Transcription activator effector binding {ECO:0000313|EMBL:ACV54691.1}; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
L2_026_092G1_scaffold_385_19
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

25351..25470
DNA (120bp) protein (40aa)
Uncharacterized protein n=2 Tax=Bacteria RepID=T4BU79_CLODI
Putative uncharacterized protein {ECO:0000313|EMBL:EGC90422.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
hypothetical protein
L2_026_092G1_scaffold_385_20
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

25496..26200
DNA (705bp) protein (235aa)
Putative uncharacterized protein n=1 Tax=Eggerthella sp. HGA1 RepID=F0HJT0_9ACTN
Putative uncharacterized protein {ECO:0000313|EMBL:EGC90598.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
hypothetical protein
L2_026_092G1_scaffold_385_21
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

26197..27117
DNA (921bp) protein (307aa)
Radical SAM domain protein n=1 Tax=Eggerthella sp. HGA1 RepID=F0HJS9_9ACTN
Radical SAM domain protein {ECO:0000313|EMBL:EGC90471.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
radical SAM protein
L2_026_092G1_scaffold_385_22
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

27272..27865
DNA (594bp) protein (198aa)
Putative uncharacterized protein n=1 Tax=Eggerthella sp. HGA1 RepID=F0HJS8_9ACTN
Putative uncharacterized protein {ECO:0000313|EMBL:EGC90492.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
hypothetical protein
L2_026_092G1_scaffold_385_23
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

27907..28857
DNA (951bp) protein (317aa)
Acetate--CoA ligase {ECO:0000313|EMBL:EGC90620.1}; EC=6.2.1.1 {ECO:0000313|EMBL:EGC90620.1};; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
Acetate--CoA ligase n=1 Tax=Eggerthella sp. HGA1 RepID=F0HJS7_9ACTN
acetate/CoA ligase
Displaying 23 items

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