ggKbase home page

L2_026_092G1_scaffold_451

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_092G1_scaffold_451_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

113..778
DNA (666bp) protein (222aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPL0_BIFLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACJ51740.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L2_026_092G1_scaffold_451_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

812..2980
DNA (2169bp) protein (723aa)
Diguanylate cyclase/phosphodiesterase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZVR2_BIFLJ
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:ADH00968.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
diguanylate cyclase
L2_026_092G1_scaffold_451_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3264..3797
DNA (534bp) protein (178aa)
Transcriptional regulators n=10 Tax=Bifidobacterium RepID=D6DBM6_BIFLN
Transcriptional regulators
MarR family transcriptional regulator {ECO:0000313|EMBL:KEY28060.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
L2_026_092G1_scaffold_451_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3794..5641
DNA (1848bp) protein (616aa)
ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E4M5_BIFBR
ATP-binding protein of ABC transporter system {ECO:0000313|EMBL:AHJ19783.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
ATP-binding protein of ABC transporter system
L2_026_092G1_scaffold_451_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5638..7653
DNA (2016bp) protein (672aa)
ABC transporter, permease/ATP-binding protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZVR0_BIFLJ
ABC transporter {ECO:0000313|EMBL:KEY28058.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
ABC transporter
L2_026_092G1_scaffold_451_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7833..8858
DNA (1026bp) protein (342aa)
LacI-type transcriptional regulator n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8ATI3_BIFLN
LacI-type transcriptional regulator
LacI family transcriptional regulator {ECO:0000313|EMBL:KEY21612.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L2_026_092G1_scaffold_451_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9046..9507
DNA (462bp) protein (154aa)
Acetyltransferase, GNAT family n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BR99_BIFBR
GNAT family acetyltransferase {ECO:0000313|EMBL:KEY28056.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
GNAT family acetyltransferase
L2_026_092G1_scaffold_451_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9572..10492
DNA (921bp) protein (307aa)
Ribonucleoside hydrolase n=5 Tax=Bifidobacterium RepID=E8MEN1_BIFL2
cytidine/uridine-specific hydrolase
Ribonucleoside hydrolase {ECO:0000313|EMBL:KEY21614.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L2_026_092G1_scaffold_451_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10594..12024
DNA (1431bp) protein (477aa)
C4-dicarboxylate transporter n=4 Tax=Bifidobacterium RepID=Q8G3I8_BIFLO
anaerobic C4-dicarboxylate uptake C family transporter
C4-dicarboxylate ABC transporter {ECO:0000313|EMBL:KEY21615.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L2_026_092G1_scaffold_451_10
unknown

Not on your lists

comp(12310..12417)
DNA (108bp) protein (36aa)

This feature has no annotations

L2_026_092G1_scaffold_451_11
unknown

Not on your lists

comp(12706..13011)
DNA (306bp) protein (102aa)

This feature has no annotations

L2_026_092G1_scaffold_451_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13728..14738
DNA (1011bp) protein (337aa)
Regulatory protein, LacI n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPL8_BIFLS
LacI family transcriptional regulator {ECO:0000313|EMBL:KEY28052.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
transcriptional regulator
L2_026_092G1_scaffold_451_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14987..15745
DNA (759bp) protein (253aa)
GntR domain protein n=2 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPL9_BIFLS
putative transcriptional regulator
GntR family transcriptional regulator {ECO:0000313|EMBL:KEY28051.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
L2_026_092G1_scaffold_451_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15886..16797
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPM0_BIFLS
UDP-N-acetylglucosamine diphosphorylase {ECO:0000313|EMBL:KEY28050.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
hypothetical protein
L2_026_092G1_scaffold_451_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16794..17738
DNA (945bp) protein (315aa)
Putative glucokinase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPM1_BIFLS
putative glucokinase
ROK family transcriptional regulator {ECO:0000313|EMBL:KEY28049.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
L2_026_092G1_scaffold_451_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17798..18481
DNA (684bp) protein (228aa)
N-acylglucosamine-6-phosphate 2-epimerase {ECO:0000313|EMBL:ACJ51752.1}; EC=5.1.3.9 {ECO:0000313|EMBL:ACJ51752.1};; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
Putative N-acetylmannosamine-6-phosphate 2-epimerase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPM2_BIFLS
N-acetylmannosamine-6-phosphate 2-epimerase
L2_026_092G1_scaffold_451_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18539..20878)
DNA (2340bp) protein (780aa)
Glycosyl hydrolase, BNR repeat-containing protein n=2 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPM3_BIFLS
Uncharacterized protein {ECO:0000313|EMBL:KEY28047.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
putative sialidase
L2_026_092G1_scaffold_451_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21155..22723
DNA (1569bp) protein (523aa)
Extracellular solute-binding protein, family 5 n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPM4_BIFLS
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KEY28046.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
putative ABC transporter substrate binding component
L2_026_092G1_scaffold_451_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22875..23831
DNA (957bp) protein (319aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPM5_BIFLS
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACJ51755.1}; Flags: Precursor;; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L2_026_092G1_scaffold_451_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23833..25977
DNA (2145bp) protein (715aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPM6_BIFLS
ABC transporter {ECO:0000313|EMBL:KEY28044.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
putative ABC transporter ATP-binding and permease components
L2_026_092G1_scaffold_451_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25974..26828
DNA (855bp) protein (285aa)
ABC transporter related n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPM7_BIFLS
putative ABC transporter ATP-binding protein
ABC transporter {ECO:0000313|EMBL:KEY28043.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
L2_026_092G1_scaffold_451_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26976..27944
DNA (969bp) protein (323aa)
Dihydrodipicolinate synthetase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPM8_BIFLS
dihydrodipicolinate synthase
Dihydrodipicolinate synthetase {ECO:0000313|EMBL:ACJ51758.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L2_026_092G1_scaffold_451_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28013..29224)
DNA (1212bp) protein (404aa)
Aspartate transaminase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPM9_BIFLS
Aspartate aminotransferase {ECO:0000313|EMBL:KEY28041.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
putative aminotransferase
L2_026_092G1_scaffold_451_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29878..32919
DNA (3042bp) protein (1014aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucine--tRNA ligase; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
Isoleucine--tRNA ligase n=2 Tax=Bifidobacterium longum subsp. infantis RepID=B7GPN0_BIFLS
ileS; isoleucyl-tRNA synthetase
L2_026_092G1_scaffold_451_25
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33464..34588
DNA (1125bp) protein (375aa)
ABC transporter, solute-binding protein n=4 Tax=Bifidobacterium breve RepID=F6C661_BIFBA
Solute binding protein of ABC transporter system
ABC transporter, solute-binding protein {ECO:0000313|EMBL:AEF26850.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L2_026_092G1_scaffold_451_26
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34626..35528
DNA (903bp) protein (301aa)
Permease protein of ABC transporter system n=2 Tax=Bifidobacterium breve RepID=F9Y070_BIFBU
Permease protein of ABC transporter system
Permease protein of ABC transporter system {ECO:0000313|EMBL:ABE94864.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L2_026_092G1_scaffold_451_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35516..36442
DNA (927bp) protein (309aa)
ABC-type spermidine/putrescine transport system permease component II-like protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPN2_BIFLS
ABC-type spermidine/putrescine transport system permease II-like protein
ABC-type spermidine/putrescine transport system permease component II-like protein {ECO:0000313|EMBL:ACJ51762.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L2_026_092G1_scaffold_451_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36439..37557
DNA (1119bp) protein (373aa)
ABC transporter related n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPN3_BIFLS
putative ABC transporter ATP-binding protein
ABC transporter related {ECO:0000313|EMBL:ACJ51763.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L2_026_092G1_scaffold_451_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37628..38455
DNA (828bp) protein (276aa)
Type I phosphodiesterase/nucleotide pyrophosphatase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPN4_BIFLS
type I phosphodiesterase/nucleotide pyrophosphatase
Type I phosphodiesterase/nucleotide pyrophosphatase {ECO:0000313|EMBL:ACJ51764.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L2_026_092G1_scaffold_451_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(38576..38968)
DNA (393bp) protein (131aa)
Putative transposase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPN5_BIFLS
transposase
Putative transposase {ECO:0000313|EMBL:ACJ51765.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
Displaying items 1-30 of 43 in total

View Taxonomy