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L2_026_374G1_scaffold_1

Search features with annotation key words

Displaying items 1-30 of 304 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_374G1_scaffold_1_1
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..93)
DNA (93bp) protein (31aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FUI3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80307.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L2_026_374G1_scaffold_1_2
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(203..670)
DNA (468bp) protein (156aa)
ABC transporter, ATP-binding protein n=3 Tax=Lachnospiraceae RepID=A7AYZ4_RUMGN
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDN78999.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
ABC-type antimicrobial peptide transport system, ATPase component
L2_026_374G1_scaffold_1_3
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(684..1994)
DNA (1311bp) protein (437aa)
ABC superfamily ATP binding cassette transporter (EC:3.6.3.-)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8C0Y8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49670.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L2_026_374G1_scaffold_1_4
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2007..3323)
DNA (1317bp) protein (439aa)
Efflux ABC transporter, permease protein n=3 Tax=Lachnospiraceae RepID=A7AYZ6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49671.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
ABC-type transport system, involved in lipoprotein release, permease component
L2_026_374G1_scaffold_1_5
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3398..3982)
DNA (585bp) protein (195aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BZ04_RUMGN
HAMP domain protein
L2_026_374G1_scaffold_1_6
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4021..4770)
DNA (750bp) protein (250aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
sensor histidine kinase (EC:2.7.3.-)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AYZ7_RUMGN
L2_026_374G1_scaffold_1_7
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4754..5425)
DNA (672bp) protein (224aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BZ56_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49673.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_026_374G1_scaffold_1_8
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5555..6415)
DNA (861bp) protein (287aa)
EDD domain protein, DegV family n=3 Tax=Lachnospiraceae RepID=A7AZ00_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49674.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
EDD domain protein, DegV family
L2_026_374G1_scaffold_1_9
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6432..7796)
DNA (1365bp) protein (455aa)
UPF0210 protein RUMGNA_00516 n=3 Tax=Lachnospiraceae RepID=A7AZ01_RUMGN
UPF0210 protein HMPREF0991_00009 {ECO:0000256|HAMAP-Rule:MF_01221}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L2_026_374G1_scaffold_1_10
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7824..8096)
DNA (273bp) protein (91aa)
UPF0237 protein RUMGNA_00517 n=3 Tax=Lachnospiraceae RepID=A7AZ02_RUMGN
UPF0237 protein HMPREF0991_00010 {ECO:0000256|HAMAP-Rule:MF_01054}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
ACT domain-containing protein
L2_026_374G1_scaffold_1_11
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8114..8911)
DNA (798bp) protein (266aa)
Metallo-beta-lactamase domain protein n=3 Tax=Lachnospiraceae RepID=A7AZ03_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49677.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Metal-dependent hydrolases of the beta-lactamase superfamily I
L2_026_374G1_scaffold_1_12
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8908..9489)
DNA (582bp) protein (194aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase n=3 Tax=Lachnospiraceae RepID=A7AZ04_RUMGN
L2_026_374G1_scaffold_1_13
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9492..12107)
DNA (2616bp) protein (872aa)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
DNA polymerase I (EC:2.7.7.7)
DNA polymerase n=2 Tax=Lachnospiraceae RepID=F7JSN7_9FIRM
L2_026_374G1_scaffold_1_14
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12163..12606)
DNA (444bp) protein (148aa)
Acetyltransferase (GNAT) family. (EC:2.3.1.-)
Acetyltransferase, GNAT family n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZ06_RUMGN
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EDN79011.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L2_026_374G1_scaffold_1_15
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12711..13451)
DNA (741bp) protein (247aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Parvulin-like peptidyl-prolyl isomerase (EC:5.2.1.8)
PPIC-type PPIASE domain protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZ07_RUMGN
L2_026_374G1_scaffold_1_16
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13538..14164)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZ08_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN79013.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Predicted integral membrane protein
L2_026_374G1_scaffold_1_17
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14161..14433)
DNA (273bp) protein (91aa)
Transcriptional regulator, ArsR family n=4 Tax=Clostridiales RepID=A7AZ09_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20419.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
transcriptional regulator, ArsR family
L2_026_374G1_scaffold_1_18
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14827..15372
DNA (546bp) protein (182aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8C072_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49684.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hydroxydechloroatrazine ethylaminohydrolase
L2_026_374G1_scaffold_1_19
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15503..15940
DNA (438bp) protein (146aa)
hydroxydechloroatrazine ethylaminohydrolase (EC:3.5.99.3)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8C104_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20421.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L2_026_374G1_scaffold_1_20
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16693..18480)
DNA (1788bp) protein (596aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZ14_RUMGN
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EDN79019.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
NADH:flavin oxidoreductase
L2_026_374G1_scaffold_1_21
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18566..19759)
DNA (1194bp) protein (398aa)
Transcriptional regulator, AraC family n=3 Tax=Lachnospiraceae RepID=A7AZ15_RUMGN
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EDN79020.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
bacterial regulatory helix-turn-helix s, AraC family protein
L2_026_374G1_scaffold_1_22
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19761..20267)
DNA (507bp) protein (169aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8C088_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49733.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
acetyltransferase
L2_026_374G1_scaffold_1_23
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20264..21565)
DNA (1302bp) protein (434aa)
Multidrug efflux protein n=3 Tax=Lachnospiraceae RepID=A7AZ17_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49734.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
putative efflux protein, MATE family
L2_026_374G1_scaffold_1_24
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22124..22288
DNA (165bp) protein (55aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7AZ19_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49735.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
GCN5-related N-acetyltransferase
L2_026_374G1_scaffold_1_25
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22327..22614
DNA (288bp) protein (96aa)
Acetyltransferase, GNAT family n=3 Tax=Lachnospiraceae RepID=A7AZ20_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49736.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
GCN5-related N-acetyltransferase
L2_026_374G1_scaffold_1_26
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22717..24447)
DNA (1731bp) protein (577aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8C179_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49737.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
ABC-type multidrug transport system, ATPase and permease components
L2_026_374G1_scaffold_1_27
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24452..26218)
DNA (1767bp) protein (589aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8C093_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49738.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
ABC-type multidrug transport system, ATPase and permease components
L2_026_374G1_scaffold_1_28
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26435..27052)
DNA (618bp) protein (206aa)
Transcriptional regulator, TetR family n=3 Tax=Lachnospiraceae RepID=A7AZ23_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49739.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
transcriptional regulator, TetR family
L2_026_374G1_scaffold_1_29
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27262..27456
DNA (195bp) protein (65aa)
Uncharacterized protein n=2 Tax=Ruminococcus gnavus RepID=A7AZ24_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20474.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L2_026_374G1_scaffold_1_30
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27605..28879)
DNA (1275bp) protein (425aa)
Diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase n=2 Tax=Ruminococcus gnavus RepID=V8C0F4_RUMGN
Putative diaminopimelate decarboxylase {ECO:0000313|EMBL:EDN79030.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Displaying items 1-30 of 304 in total

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