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L2_026_374G1_scaffold_117

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Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_374G1_scaffold_117_1
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..98
DNA (96bp) protein (32aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CC55_001C RepID=V8BR14_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN42514.1}; Flags: Fragment;; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L2_026_374G1_scaffold_117_2
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

312..626
DNA (315bp) protein (105aa)
L-rhamnose mutarotase {ECO:0000256|SAAS:SAAS00048862}; EC=5.1.3.32 {ECO:0000256|SAAS:SAAS00169483};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
rhaU; L-rhamnose 1-epimerase (EC:5.1.3.-)
L-rhamnose 1-epimerase n=3 Tax=Lachnospiraceae RepID=A7B0G6_RUMGN
L2_026_374G1_scaffold_117_3
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(627..1502)
DNA (876bp) protein (292aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=R5TNE3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67298.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
AraC family transcriptional regulator
L2_026_374G1_scaffold_117_4
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1669..2745
DNA (1077bp) protein (359aa)
Mannonate dehydratase {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414};; D-mannonate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00106}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
mannonate dehydratase (EC:4.2.1.8)
Mannonate dehydratase n=3 Tax=Lachnospiraceae RepID=A7B0G9_RUMGN
L2_026_374G1_scaffold_117_5
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2748..4358
DNA (1611bp) protein (537aa)
Mannitol-1-phosphate/altronate dehydrogenases (EC:1.1.1.57)
Mannitol dehydrogenase domain protein n=4 Tax=Clostridiales RepID=A7B0H0_RUMGN
Mannitol dehydrogenase domain protein {ECO:0000313|EMBL:EDN78636.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L2_026_374G1_scaffold_117_6
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4370..5776
DNA (1407bp) protein (469aa)
Uronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013440}; EC=5.3.1.12 {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013438};; Glucuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; Uronic isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Uronate isomerase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U832_9FIRM
glucuronate isomerase
L2_026_374G1_scaffold_117_7
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5831..6592)
DNA (762bp) protein (254aa)
Transcriptional regulator, IclR family, C-terminal domain protein n=3 Tax=Lachnospiraceae RepID=A7B0H2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17002.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
transcriptional regulator, IclR family
L2_026_374G1_scaffold_117_8
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6826..7785
DNA (960bp) protein (320aa)
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase {ECO:0000313|EMBL:EDN78639.1}; EC=4.1.2.14 {ECO:0000313|EMBL:EDN78639.1};; EC=4.1.3.16 {ECO:0000313|EMBL:EDN78639.1};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Entner-Doudoroff aldolase (EC:4.1.2.14 4.1.3.16)
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase n=3 Tax=Lachnospiraceae RepID=A7B0H3_RUMGN
L2_026_374G1_scaffold_117_9
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7809..8834
DNA (1026bp) protein (342aa)
Sugar kinases, ribokinase family (EC:2.7.1.45)
Kinase, PfkB family n=3 Tax=Lachnospiraceae RepID=A7B0H4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17004.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L2_026_374G1_scaffold_117_10
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9023..9874
DNA (852bp) protein (284aa)
ketose-bisphosphate aldolases (EC:4.1.2.40 4.1.2.13)
Ketose-bisphosphate aldolase n=3 Tax=Lachnospiraceae RepID=A7B0H5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17005.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L2_026_374G1_scaffold_117_11
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9912..10922
DNA (1011bp) protein (337aa)
transcriptional regulator, LacI family (EC:5.1.1.1)
Sugar-binding domain protein n=3 Tax=Lachnospiraceae RepID=A7B0H6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47391.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L2_026_374G1_scaffold_117_12
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10984..12510
DNA (1527bp) protein (509aa)
Sugar (pentulose and hexulose) kinases (EC:2.7.1.17)
Carbohydrate kinase, FGGY family protein n=3 Tax=Lachnospiraceae RepID=A7B0H7_RUMGN
Carbohydrate kinase, FGGY family protein {ECO:0000313|EMBL:EDN78643.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L2_026_374G1_scaffold_117_13
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12507..13556
DNA (1050bp) protein (350aa)
Threonine dehydrogenase and related Zn-dependent dehydrogenases (EC:1.1.1.251)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CC55_001C RepID=V8BPA3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17008.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L2_026_374G1_scaffold_117_14
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13580..14512
DNA (933bp) protein (311aa)
Tagatose-6-phosphate kinase {ECO:0000256|PIRNR:PIRNR000535}; EC=2.7.1.144 {ECO:0000256|PIRNR:PIRNR000535};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
1-phosphofructokinase (EC:2.7.1.144)
Tagatose-6-phosphate kinase n=3 Tax=Lachnospiraceae RepID=A7B0H9_RUMGN
L2_026_374G1_scaffold_117_15
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14532..15542
DNA (1011bp) protein (337aa)
Aldo/keto reductases, related to diketogulonate reductase (EC:1.1.1.21)
Oxidoreductase, aldo/keto reductase family protein n=3 Tax=Lachnospiraceae RepID=A7B0I0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47387.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L2_026_374G1_scaffold_117_16
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15667..16488
DNA (822bp) protein (274aa)
Transcriptional regulator, RpiR family n=3 Tax=Lachnospiraceae RepID=A7B0I1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47386.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Transcriptional regulators
L2_026_374G1_scaffold_117_17
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16610..18916
DNA (2307bp) protein (769aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B0I2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47385.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L2_026_374G1_scaffold_117_18
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18933..20363
DNA (1431bp) protein (477aa)
Phosphotransferase system, EIIC n=4 Tax=Clostridiales RepID=A7B0I3_RUMGN
Phosphotransferase system, EIIC {ECO:0000313|EMBL:EDN78649.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
PTS system beta-glucoside-specific IIA component, Glc family (TC 4.A.1.2.6)/PTS system beta-glucoside-specific IIB component, Glc family (TC 4.A.1.2.6)/PTS system beta-glucoside-specific IIC component, Glc family (TC 4.A.1.2.6)
L2_026_374G1_scaffold_117_19
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20538..22142
DNA (1605bp) protein (535aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BPJ4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47382.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
L2_026_374G1_scaffold_117_20
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22146..23951
DNA (1806bp) protein (602aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Predicted signal transduction protein with a C-terminal ATPase domain (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=3 Tax=Lachnospiraceae RepID=A7B0I5_RUMGN
L2_026_374G1_scaffold_117_21
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23932..24930
DNA (999bp) protein (333aa)
Sugar-binding domain protein n=3 Tax=Lachnospiraceae RepID=A7B0I6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47379.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
periplasmic binding protein/LacI transcriptional regulator
L2_026_374G1_scaffold_117_22
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25257..26231
DNA (975bp) protein (325aa)
monosaccharide-transporting ATPase (EC:3.6.3.17)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CC55_001C RepID=V8BQH9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17017.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L2_026_374G1_scaffold_117_23
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26287..27783
DNA (1497bp) protein (499aa)
Monosaccharide-transporting ATPase {ECO:0000256|SAAS:SAAS00041637}; EC=3.6.3.17 {ECO:0000256|SAAS:SAAS00041637};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-) (EC:3.6.3.17)
ABC transporter, ATP-binding protein n=3 Tax=Lachnospiraceae RepID=A7B0I8_RUMGN
L2_026_374G1_scaffold_117_24
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27796..28800
DNA (1005bp) protein (335aa)
Branched-chain amino acid ABC transporter, permease protein n=3 Tax=Lachnospiraceae RepID=A7B0I9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47376.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-)
L2_026_374G1_scaffold_117_25
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28934..30049
DNA (1116bp) protein (372aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B0J0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47375.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-)
L2_026_374G1_scaffold_117_26
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30150..30590
DNA (441bp) protein (147aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B0J1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47374.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L2_026_374G1_scaffold_117_27
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30758..31606)
DNA (849bp) protein (283aa)
Transcriptional regulator, AraC family n=3 Tax=Lachnospiraceae RepID=A7B0J2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17022.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
AraC-type DNA-binding domain-containing proteins
L2_026_374G1_scaffold_117_28
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31725..33200
DNA (1476bp) protein (492aa)
Sugar (pentulose and hexulose) kinases (EC:2.7.1.5 2.7.1.51)
Carbohydrate kinase, FGGY family protein n=4 Tax=Clostridiales RepID=A7B0J3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47372.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L2_026_374G1_scaffold_117_29
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33222..35015
DNA (1794bp) protein (598aa)
L-fucose isomerase {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040911}; Short=FucIase {ECO:0000256|HAMAP-Rule:MF_01254};; EC=5.3.1.25 {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040955};; 6-deoxy-L-galactose isomerase {ECO:0000256|HAMAP-Rule:MF_01254}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L-fucose isomerase (EC:5.3.1.25)
L-fucose isomerase n=3 Tax=Lachnospiraceae RepID=A7B0J4_RUMGN
L2_026_374G1_scaffold_117_30
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35091..35537
DNA (447bp) protein (149aa)
Fucose dissimilation pathway protein FucU (EC:5.1.3.-)
RbsD/FucU transport family protein n=4 Tax=Clostridiales RepID=A7B0J5_RUMGN
RbsD/FucU transport family protein {ECO:0000313|EMBL:EDN78661.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Displaying items 1-30 of 61 in total

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