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L2_026_374G1_scaffold_175

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_374G1_scaffold_175_1
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..986
DNA (984bp) protein (328aa)
Collagenase and related proteases (EC:3.4.-.-)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PHX3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23155.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_026_374G1_scaffold_175_2
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

995..2530
DNA (1536bp) protein (512aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R6PQW1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23154.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Bacterial cell division membrane protein
L2_026_374G1_scaffold_175_3
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2547..3902
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PFP4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23153.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Cell division protein FtsI/penicillin-binding protein 2
L2_026_374G1_scaffold_175_4
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3920..4258
DNA (339bp) protein (113aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FRY0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23152.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_026_374G1_scaffold_175_5
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4267..5163
DNA (897bp) protein (299aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FRX9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23151.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Protein of unknown function (DUF2953).
L2_026_374G1_scaffold_175_6
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5186..5572
DNA (387bp) protein (129aa)
Sporulation protein YtfJ n=2 Tax=Clostridium RepID=B6FRX8_9CLOT
Sporulation protein YtfJ {ECO:0000313|EMBL:EEA81190.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_026_374G1_scaffold_175_7
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5627..5764
DNA (138bp) protein (46aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PQV6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23149.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_026_374G1_scaffold_175_8
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(5821..6009)
DNA (189bp) protein (63aa)
50S ribosomal protein L28 n=2 Tax=Clostridium RepID=B6FRX6_9CLOT
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
LSU ribosomal protein L28P
L2_026_374G1_scaffold_175_9
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6217..6576
DNA (360bp) protein (120aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FRX5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA81187.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_026_374G1_scaffold_175_10
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6595..8253
DNA (1659bp) protein (553aa)
DAK2 domain fusion protein YloV n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B9S8_9FIRM
DAK2 domain fusion protein YloV {ECO:0000313|EMBL:EGG84200.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
DegV protein
L2_026_374G1_scaffold_175_11
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8313..10373
DNA (2061bp) protein (687aa)
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:EEA81218.1}; EC=3.6.1.- {ECO:0000313|EMBL:EEA81218.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ATP-dependent DNA helicase RecG (EC:3.6.1.-)
ATP-dependent DNA helicase RecG n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FRX2_9CLOT
L2_026_374G1_scaffold_175_12
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10502..10708
DNA (207bp) protein (69aa)
Small, acid-soluble spore protein, alpha/beta type n=2 Tax=Clostridium RepID=B6FRX0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23144.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Small, acid-soluble spore proteins, alpha/beta type.
L2_026_374G1_scaffold_175_13
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10801..11391
DNA (591bp) protein (197aa)
RNA methyltransferase, RsmD family {ECO:0000313|EMBL:EEA81253.1}; EC=2.1.1.- {ECO:0000313|EMBL:EEA81253.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
RNA methyltransferase, RsmD family n=2 Tax=Clostridium RepID=B6FRW9_9CLOT
RNA methyltransferase, RsmD family
L2_026_374G1_scaffold_175_14
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11395..11886
DNA (492bp) protein (164aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
pantetheine-phosphate adenylyltransferase, bacterial (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase n=2 Tax=Clostridium RepID=B6FRW8_9CLOT
L2_026_374G1_scaffold_175_15
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11890..12483
DNA (594bp) protein (198aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FRW7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23141.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_026_374G1_scaffold_175_16
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12470..13408)
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PHV8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23140.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_026_374G1_scaffold_175_17
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13516..14964
DNA (1449bp) protein (483aa)
Xaa-His dipeptidase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FRW5_9CLOT
Xaa-His dipeptidase {ECO:0000313|EMBL:EEA81249.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_026_374G1_scaffold_175_18
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15021..15863
DNA (843bp) protein (281aa)
Peptidase, M23 family n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FRW4_9CLOT
Peptidase, M23 family {ECO:0000313|EMBL:EEA81248.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
peptidase M23
L2_026_374G1_scaffold_175_19
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15924..17306
DNA (1383bp) protein (461aa)
NOL1/NOP2/sun family protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FRW3_9CLOT
NOL1/NOP2/sun family protein {ECO:0000313|EMBL:EEA81247.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_026_374G1_scaffold_175_20
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17306..18010
DNA (705bp) protein (235aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ribosomal small subunit pseudouridine synthase A (EC:5.4.99.- 5.4.99.12)
Pseudouridine synthase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FRW2_9CLOT
L2_026_374G1_scaffold_175_21
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18004..18675
DNA (672bp) protein (224aa)
HAD hydrolase, family IA, variant 3 n=2 Tax=Clostridium RepID=B6FRW1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23135.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
HAD family hydrolase
L2_026_374G1_scaffold_175_22
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18672..20576
DNA (1905bp) protein (635aa)
UPF0313 protein CLONEX_02884 n=2 Tax=Clostridium RepID=B6FRW0_9CLOT
UPF0313 protein CLONEX_02884 {ECO:0000256|HAMAP-Rule:MF_01251}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_026_374G1_scaffold_175_23
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20604..21362
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PFM5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23133.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Short-chain dehydrogenases of various substrate specificities
L2_026_374G1_scaffold_175_24
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21379..21954
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FRV8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA81242.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_026_374G1_scaffold_175_25
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21964..22935
DNA (972bp) protein (324aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Pseudouridine synthase, RluA family n=2 Tax=Clostridium RepID=B6FRV7_9CLOT
RluA family pseudouridine synthase
L2_026_374G1_scaffold_175_26
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22940..23473
DNA (534bp) protein (178aa)
Holliday junction resolvase RecU {ECO:0000256|HAMAP-Rule:MF_00130, ECO:0000256|SAAS:SAAS00056687}; EC=3.1.22.- {ECO:0000256|HAMAP-Rule:MF_00130, ECO:0000256|SAAS:SAAS00056689};; Recombination protein U homolog {ECO:0000256|HAMAP-Rule:MF_00130}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Holliday junction resolvase RecU n=2 Tax=Clostridium RepID=B6FRV6_9CLOT
Penicillin-binding protein-related factor A, putative recombinase
L2_026_374G1_scaffold_175_27
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23544..24800
DNA (1257bp) protein (419aa)
ATP phosphoribosyltransferase regulatory subunit (EC:2.4.2.17)
ATP phosphoribosyltransferase regulatory subunit n=2 Tax=Clostridium RepID=B6FRV5_9CLOT
ATP phosphoribosyltransferase regulatory subunit {ECO:0000256|HAMAP-Rule:MF_00125, ECO:0000256|SAAS:SAAS00089029}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_026_374G1_scaffold_175_28
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24797..25441
DNA (645bp) protein (215aa)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00008790}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_01018};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_01018};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00046302};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ATP phosphoribosyltransferase catalytic subunit (EC:2.4.2.17)
ATP phosphoribosyltransferase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FRV4_9CLOT
L2_026_374G1_scaffold_175_29
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25443..26735
DNA (1293bp) protein (431aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
histidinol dehydrogenase (EC:1.1.1.23)
Histidinol dehydrogenase n=2 Tax=Clostridium RepID=B6FRV3_9CLOT
L2_026_374G1_scaffold_175_30
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26746..27339
DNA (594bp) protein (198aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FRV2_9CLOT
Displaying items 1-30 of 49 in total

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