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L2_026_374G1_scaffold_194

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Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_374G1_scaffold_194_1
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..551)
DNA (549bp) protein (183aa)
Sensor protein KdpD {ECO:0000313|EMBL:KJJ77389.1}; EC=2.7.13.3 {ECO:0000313|EMBL:KJJ77389.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (EC:2.7.13.3)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HTC0_9CLOT
L2_026_374G1_scaffold_194_2
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(602..2161)
DNA (1560bp) protein (520aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IR16_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42714.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
L2_026_374G1_scaffold_194_3
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2172..2864)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IKT9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42715.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
integral membrane protein TIGR01906
L2_026_374G1_scaffold_194_4
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(3044..4387)
DNA (1344bp) protein (448aa)
MATE efflux family protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R6P1_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:CCZ34434.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
putative efflux protein, MATE family
L2_026_374G1_scaffold_194_5
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4647..5570)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J122_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42716.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
mechanosensitive ion channel protein MscS
L2_026_374G1_scaffold_194_6
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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comp(5585..6049)
DNA (465bp) protein (155aa)
Transcriptional regulator BadM/Rrf2 family n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6CX60_9FIRM
Transcriptional regulator BadM/Rrf2 family {ECO:0000313|EMBL:CDA81143.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
transcriptional regulator, BadM/Rrf2 family
L2_026_374G1_scaffold_194_7
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6514..7554
DNA (1041bp) protein (347aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
ABC transporter ATP-binding protein n=1 Tax=Clostridium sp. CAG:81 RepID=R5G1S0_9CLOT
ABC-type metal ion transport system, ATPase component
L2_026_374G1_scaffold_194_8
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

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7541..8218
DNA (678bp) protein (226aa)
ABC-type metal ion transport system, permease component n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GP90_9FIRM
ABC-type metal ion transport system, permease component
ABC-type metal ion transport system, permease component {ECO:0000313|EMBL:CBL42625.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L2_026_374G1_scaffold_194_9
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8266..9111
DNA (846bp) protein (282aa)
Lipoprotein n=1 Tax=Clostridium sp. CAG:81 RepID=R5G1S5_9CLOT
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
ABC-type metal ion transport system, periplasmic component/surface antigen
L2_026_374G1_scaffold_194_10
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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9124..10305
DNA (1182bp) protein (394aa)
Amidohydrolase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C6N7_9FIRM
Amidohydrolase {ECO:0000313|EMBL:EHO35773.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
amidohydrolase
L2_026_374G1_scaffold_194_11
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10302..11327
DNA (1026bp) protein (342aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
ABC-type metal ion transport system ATPase component n=1 Tax=Clostridium sp. CAG:81 RepID=R5FYN5_9CLOT
ABC-type metal ion transport system, ATPase component
L2_026_374G1_scaffold_194_12
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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11324..11992
DNA (669bp) protein (223aa)
ABC transporter, permease protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CPV0_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EDY32710.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
ABC-type metal ion transport system, permease component
L2_026_374G1_scaffold_194_13
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12044..12943
DNA (900bp) protein (300aa)
ABC-type metal ion transport system periplasmic component/surface antigen n=1 Tax=Clostridium sp. CAG:81 RepID=R5G759_9CLOT
ABC-type metal ion transport system periplasmic component/surface antigen {ECO:0000313|EMBL:CCY08737.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
ABC-type metal ion transport system, periplasmic component/surface antigen
L2_026_374G1_scaffold_194_14
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13064..13795
DNA (732bp) protein (244aa)
Peptidase C26 n=1 Tax=Dorea sp. CAG:317 RepID=R6WGD8_9FIRM
Peptidase C26 {ECO:0000313|EMBL:CDD08445.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
peptidase C26
L2_026_374G1_scaffold_194_15
Coriobacterium glomerans, Coriobacterium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

13805..15109
DNA (1305bp) protein (435aa)
Amino acid/polyamine/organocation transporter, APC superfamily n=1 Tax=Coriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 / PW2) RepID=F2NA24_CORGP
amino acid/polyamine/organocation transporter
Amino acid/polyamine/organocation transporter, APC superfamily {ECO:0000313|EMBL:AEB06418.1}; TaxID=700015 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Coriobacterium.;" source="Coriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 /; PW2).;"
L2_026_374G1_scaffold_194_16
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15671..16330)
DNA (660bp) protein (220aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IKQ6_9CLOT
L2_026_374G1_scaffold_194_17
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16603..17034
DNA (432bp) protein (144aa)
Phosphotransferase system, mannose/fructose-specific component IIA (EC:2.7.1.69)
PTS system fructose IIA component n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GJP8_9FIRM
PTS system fructose IIA component {ECO:0000313|EMBL:CCY12771.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
L2_026_374G1_scaffold_194_18
Sebaldella termitidis, Sebaldella, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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17071..17562
DNA (492bp) protein (164aa)
PTS system sorbose subfamily IIB component n=1 Tax=Sebaldella termitidis (strain ATCC 33386 / NCTC 11300) RepID=D1AQK7_SEBTE
PTS system sorbose subfamily transporter subunit IIB
PTS system sorbose subfamily IIB component {ECO:0000313|EMBL:ACZ10267.1}; TaxID=526218 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Sebaldella.;" source="Sebaldella termitidis (strain ATCC 33386 / NCTC 11300).;"
L2_026_374G1_scaffold_194_19
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17591..18433
DNA (843bp) protein (281aa)
PTS system, fructose-and mannose-inducible IIC component {ECO:0000313|EMBL:KJZ88691.1}; EC=2.7.1.69 {ECO:0000313|EMBL:KJZ88691.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
PTS system, fructose n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JCS8_CLOBU
PTS system fructose(mannose)-specific transporter subunit IIC
L2_026_374G1_scaffold_194_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18435..19247
DNA (813bp) protein (271aa)
UPI0003D5A10D related cluster n=1 Tax=unknown RepID=UPI0003D5A10D
PTS system, fructose {ECO:0000313|EMBL:ETI88755.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
PTS system fructose(mannose)-specific transporter subunit IID
L2_026_374G1_scaffold_194_21
Clostridium acetobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19379..20344
DNA (966bp) protein (322aa)
Ribose ABC transporter (Ribose-binding periplasmic component) n=3 Tax=Clostridium acetobutylicum RepID=F0K3U3_CLOAE
rbsB; ribose ABC transporter periplasmic ribose-binding protein
Ribose ABC transporter (Ribose-binding periplasmic component) {ECO:0000313|EMBL:AAK79421.1}; TaxID=272562 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG; 5710 / VKM B-1787).;"
L2_026_374G1_scaffold_194_22
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20358..21668
DNA (1311bp) protein (437aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U324_ETHHY
integral membrane sensor signal transduction histidine kinase
Integral membrane sensor signal transduction histidine kinase {ECO:0000313|EMBL:ADU26391.1}; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033; / YUAN-3).;"
L2_026_374G1_scaffold_194_23
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21668..22342
DNA (675bp) protein (225aa)
Two-component system response regulator n=2 Tax=Clostridium bolteae RepID=N9ZWL2_9CLOT
Two-component system response regulator {ECO:0000313|EMBL:ENZ51072.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
two-component system response regulator
L2_026_374G1_scaffold_194_24
Clostridium acetobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22450..23766
DNA (1317bp) protein (439aa)
Sugar-binding periplasmic protein n=1 Tax=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) RepID=Q97J30_CLOAB
sugar-binding periplasmic protein
Sugar-binding periplasmic protein {ECO:0000313|EMBL:AAK79424.1}; TaxID=272562 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG; 5710 / VKM B-1787).;"
L2_026_374G1_scaffold_194_25
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23811..24635
DNA (825bp) protein (275aa)
Cof-like hydrolase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EF13_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:EEQ58666.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
cof family hydrolase
L2_026_374G1_scaffold_194_26
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24751..25812
DNA (1062bp) protein (354aa)
Uncharacterized protein n=8 Tax=Clostridium clostridioforme RepID=N9VZS8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12188.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
SH3 type 3 domain-containing protein
L2_026_374G1_scaffold_194_27
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26093..27865
DNA (1773bp) protein (591aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF356 RepID=N1ZIV6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ13933.1}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
methyl-accepting chemotaxis sensory transducer
L2_026_374G1_scaffold_194_28
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28186..28497
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IVD3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40752.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_026_374G1_scaffold_194_29
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28502..29524
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IF55_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40753.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
H+transporting two-sector ATPase C (AC39) subunit
L2_026_374G1_scaffold_194_30
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29540..31486
DNA (1947bp) protein (649aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IKA1_9CLOT
V-type ATP synthase subunit I {ECO:0000256|RuleBase:RU361189}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
V-type ATPase 116 kDa subunit
Displaying items 1-30 of 45 in total

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