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L2_026_374G1_scaffold_230

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_374G1_scaffold_230_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(147..1349)
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JE03_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76902.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
serine phosphatase
L2_026_374G1_scaffold_230_2
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1336..3060)
DNA (1725bp) protein (575aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JE04_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76903.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
putative PAS/PAC sensor protein
L2_026_374G1_scaffold_230_3
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3271..5979)
DNA (2709bp) protein (903aa)
Formate dehydrogenase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CFF6_9FIRM
Formate dehydrogenase {ECO:0000313|EMBL:CDD76467.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
anaerobic dehydrogenase
L2_026_374G1_scaffold_230_4
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5993..7870)
DNA (1878bp) protein (626aa)
NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit (EC:1.6.5.3)
NADH dehydrogenase I subunit F n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CEF3_9FIRM
NADH dehydrogenase I subunit F {ECO:0000313|EMBL:CDD76466.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_026_374G1_scaffold_230_5
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7867..8349)
DNA (483bp) protein (161aa)
NADH:ubiquinone oxidoreductase 24 kD subunit (EC:1.6.5.3)
Uncharacterized protein n=2 Tax=Clostridiales RepID=C6JE07_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76906.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_026_374G1_scaffold_230_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8713..9405)
DNA (693bp) protein (231aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JE09_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76908.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_026_374G1_scaffold_230_7
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9416..10246)
DNA (831bp) protein (277aa)
DNA uptake protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CGL0_9FIRM
DNA uptake protein {ECO:0000313|EMBL:CDD76458.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
competence protein ComEA helix-hairpin-helix repeat region
L2_026_374G1_scaffold_230_8
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10343..10777)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JE11_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76910.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_026_374G1_scaffold_230_9
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10907..11188)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CE17_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76454.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_026_374G1_scaffold_230_10
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11181..11447)
DNA (267bp) protein (89aa)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CFE3_9FIRM
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:CDD76452.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
UDP-N-acetyl-glucosamine-2-epimerase
L2_026_374G1_scaffold_230_11
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11462..11785)
DNA (324bp) protein (108aa)
UDP-N-Acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CFE3_9FIRM
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:CDD76452.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_026_374G1_scaffold_230_12
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11821..13713)
DNA (1893bp) protein (631aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CES4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76450.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Calcineurin-like phosphoesterase
L2_026_374G1_scaffold_230_13
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13738..15141)
DNA (1404bp) protein (468aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EEF66355.1}; EC=2.4.-.- {ECO:0000313|EMBL:EEF66355.1};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YCC6_9FIRM
Glycosyltransferases, probably involved in cell wall biogenesis
L2_026_374G1_scaffold_230_14
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15125..16237)
DNA (1113bp) protein (371aa)
Putative phage DNA packaging protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YCC5_9FIRM
Putative phage DNA packaging protein {ECO:0000313|EMBL:EEF66354.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L2_026_374G1_scaffold_230_15
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16279..18444)
DNA (2166bp) protein (722aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI0003803153
Uncharacterized protein {ECO:0000313|EMBL:EGN48010.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L2_026_374G1_scaffold_230_16
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18494..20041)
DNA (1548bp) protein (516aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KKM4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN48011.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L2_026_374G1_scaffold_230_17
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20086..20763)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YCC2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF66351.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
FIG01117570: hypothetical protein
L2_026_374G1_scaffold_230_18
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20779..21474)
DNA (696bp) protein (232aa)
VTC domain protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BAY4_9CLOT
VTC domain protein {ECO:0000313|EMBL:ERI69360.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
L2_026_374G1_scaffold_230_19
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21464..22351)
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0002F2239C
Uncharacterized protein {ECO:0000313|EMBL:EGN48014.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L2_026_374G1_scaffold_230_20
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22607..22801)
DNA (195bp) protein (65aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WV94_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX70339.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
L2_026_374G1_scaffold_230_21
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22863..24314)
DNA (1452bp) protein (484aa)
Diguanylate cyclase (GGDEF) domain n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E1D1_9FIRM
diguanylate cyclase (GGDEF) domain
Diguanylate cyclase (GGDEF) domain {ECO:0000313|EMBL:CBK91652.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L2_026_374G1_scaffold_230_22
unknown

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comp(24378..24539)
DNA (162bp) protein (54aa)

This feature has no annotations

L2_026_374G1_scaffold_230_23
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24487..25434)
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFA3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76450.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_026_374G1_scaffold_230_24
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25714..27042
DNA (1329bp) protein (443aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI000311C14D
Uncharacterized protein {ECO:0000313|EMBL:EES76451.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_026_374G1_scaffold_230_25
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27058..27771
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002EEA148
Uncharacterized protein {ECO:0000313|EMBL:EES76452.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Response regulator of the LytR/AlgR family
L2_026_374G1_scaffold_230_26
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27930..30011)
DNA (2082bp) protein (694aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JE13_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76912.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_026_374G1_scaffold_230_27
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30038..30412)
DNA (375bp) protein (125aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JE14_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76913.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_026_374G1_scaffold_230_28
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30676..31392
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JE15_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76914.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Response regulator of the LytR/AlgR family
L2_026_374G1_scaffold_230_29
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31394..32713
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPK6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79871.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
L2_026_374G1_scaffold_230_30
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32812..34002)
DNA (1191bp) protein (397aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
acetylornithine aminotransferase apoenzyme (EC:2.6.1.11)
Acetylornithine aminotransferase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JE17_9FIRM
Displaying items 1-30 of 36 in total

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