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L2_026_374G1_scaffold_232

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_374G1_scaffold_232_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..1819
DNA (1818bp) protein (606aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
DNA-directed RNA polymerase subunit beta' n=8 Tax=Bifidobacterium RepID=F6C5Y1_BIFBA
DNA-directed RNA polymerase beta' chain
L2_026_374G1_scaffold_232_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1958..4348)
DNA (2391bp) protein (797aa)
Transglutaminase-like protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CU37_BIFBR
putative membrane spanning protein
Transglutaminase-like protein {ECO:0000313|EMBL:ERI87588.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_026_374G1_scaffold_232_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4345..5634)
DNA (1290bp) protein (430aa)
Uncharacterized protein n=5 Tax=Bifidobacterium breve RepID=F6C5X9_BIFBA
Hypothetical protein with DUF58 domain
Uncharacterized protein {ECO:0000313|EMBL:AEF26356.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L2_026_374G1_scaffold_232_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5648..12172)
DNA (6525bp) protein (2175aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZJ81_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD76818.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Fused Hypothetical protein with a fibronectin type III domain and MoxR protein
L2_026_374G1_scaffold_232_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12144..13292)
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3AKF3_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD76819.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Serine/threonine protein kinase
L2_026_374G1_scaffold_232_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13429..17526
DNA (4098bp) protein (1366aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E599_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:ERI87581.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
ATP-dependent DNA helicase, UvrD/REP family
L2_026_374G1_scaffold_232_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17523..21458
DNA (3936bp) protein (1312aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
UvrD/REP helicase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CSS3_BIFBR
ATP-dependent DNA helicase, UvrD/REP family
L2_026_374G1_scaffold_232_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21630..22949
DNA (1320bp) protein (440aa)
Transporter, major facilitator family protein n=5 Tax=Bifidobacterium breve RepID=F6C5X4_BIFBA
transporter, major facilitator family protein
Putative transport protein {ECO:0000313|EMBL:BAQ99468.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L2_026_374G1_scaffold_232_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23037..23792
DNA (756bp) protein (252aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CU27_BIFBR
Dihydrodipicolinate reductase
L2_026_374G1_scaffold_232_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23913..24803
DNA (891bp) protein (297aa)
dapA2; Dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
4-hydroxy-tetrahydrodipicolinate synthase n=3 Tax=Bifidobacterium breve RepID=F9Y2A6_BIFBU
L2_026_374G1_scaffold_232_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24883..26739
DNA (1857bp) protein (619aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=D4BMW4_BIFBR
Metal-dependent hydrolase
Uncharacterized protein {ECO:0000313|EMBL:EFE89001.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L2_026_374G1_scaffold_232_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26781..29390
DNA (2610bp) protein (870aa)
Aminopeptidase {ECO:0000313|EMBL:BAQ99472.1}; Membrane alanyl aminopeptidase {ECO:0000313|EMBL:EFE89002.1}; EC=3.4.11.2 {ECO:0000313|EMBL:EFE89002.1};; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Membrane alanyl aminopeptidase n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BMW5_BIFBR
Alanine aminopeptidase
L2_026_374G1_scaffold_232_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29838..31262
DNA (1425bp) protein (475aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|SAAS:SAAS00078319}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|SAAS:SAAS00078300};; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Phosphoglucosamine mutase n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L1N7_BIFBR
mrsA; Phosphoglucosamine mutase
L2_026_374G1_scaffold_232_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31406..32059
DNA (654bp) protein (218aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Peptide deformylase n=4 Tax=Bifidobacterium breve RepID=F6C5W8_BIFBA
Peptide deformylase
L2_026_374G1_scaffold_232_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32056..33510
DNA (1455bp) protein (485aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C5W7_BIFBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF26399.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L2_026_374G1_scaffold_232_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33862..34986
DNA (1125bp) protein (375aa)
Peptide chain release factor 2 n=5 Tax=Bifidobacterium breve RepID=F6C5W5_BIFBA
Bacterial Peptide Chain Release Factor 2 (RF-2)
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L2_026_374G1_scaffold_232_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34989..36185
DNA (1197bp) protein (399aa)
Cell division ATP-binding protein FtsE n=4 Tax=Bifidobacterium breve RepID=F6C5W4_BIFBA
Cell division ATP-binding protein ftsE
Cell division ATP-binding protein ftsE {ECO:0000313|EMBL:AHJ20694.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L2_026_374G1_scaffold_232_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36189..37112
DNA (924bp) protein (308aa)
Cell division protein FtsX n=6 Tax=Bifidobacterium breve RepID=F6C5W3_BIFBA
Cell division protein ftsX
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L2_026_374G1_scaffold_232_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37191..38537
DNA (1347bp) protein (449aa)
CHAP domain protein n=4 Tax=Bifidobacterium breve RepID=F6C5W2_BIFBA
putative secreted protein with CHAP domain
CHAP domain protein {ECO:0000313|EMBL:EFE89011.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L2_026_374G1_scaffold_232_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

38651..39127
DNA (477bp) protein (159aa)
SsrA-binding protein n=5 Tax=Bifidobacterium breve RepID=F6C5W1_BIFBA
SsrA-binding protein
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L2_026_374G1_scaffold_232_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

39249..39635
DNA (387bp) protein (129aa)
ABC transporter, substrate-binding protein, family 3 n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C5W0_BIFBA
Solute-binding protein of ABC transporter system
Solute-binding protein of ABC transporter system {ECO:0000313|EMBL:AHJ20698.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
Displaying 21 items

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