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L2_026_374G1_scaffold_272

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_374G1_scaffold_272_1
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..357)
DNA (357bp) protein (119aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=R6QMA7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23082.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
DNA replication protein
L2_026_374G1_scaffold_272_2
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(354..1910)
DNA (1557bp) protein (519aa)
Integrase core domain protein (Fragment) n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FVQ9_9CLOT
Integrase core domain protein {ECO:0000313|EMBL:EEA79881.1}; Flags: Fragment;; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Transposase and inactivated derivatives
L2_026_374G1_scaffold_272_3
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2139..2399
DNA (261bp) protein (87aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R6PL17_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC25038.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
methylenetetrahydrofolate dehydrogenase
L2_026_374G1_scaffold_272_4
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2494..3948)
DNA (1455bp) protein (485aa)
Arylsulfatase n=2 Tax=Clostridium RepID=B6FPJ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC25029.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
sulfatase
L2_026_374G1_scaffold_272_5
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4173..5537
DNA (1365bp) protein (455aa)
Carbohydrate ABC transporter, carbohydrate-binding protein n=2 Tax=Clostridium RepID=B6FPJ4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC25028.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
ABC-type sugar transport system, periplasmic component
L2_026_374G1_scaffold_272_6
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5629..6519
DNA (891bp) protein (297aa)
ABC transporter, permease protein n=2 Tax=Clostridium RepID=B6FPJ3_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:EEA82057.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ABC transporter
L2_026_374G1_scaffold_272_7
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6537..7403
DNA (867bp) protein (289aa)
ABC transporter, permease protein n=2 Tax=Clostridium RepID=B6FPJ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC25024.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L2_026_374G1_scaffold_272_8
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7608..8462)
DNA (855bp) protein (285aa)
Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=B6FPJ0_9CLOT
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEA82054.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
AraC family transcriptional regulator
L2_026_374G1_scaffold_272_9
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8641..9567
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PL02_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC25018.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
dTDP-glucose pyrophosphorylase
L2_026_374G1_scaffold_272_10
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9567..10682
DNA (1116bp) protein (372aa)
Phosphotransferase enzyme family n=2 Tax=Clostridium RepID=B6FPI8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC25016.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Phosphotransferase enzyme family.
L2_026_374G1_scaffold_272_11
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10799..11815
DNA (1017bp) protein (339aa)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EEA82051.1}; EC=5.1.3.2 {ECO:0000313|EMBL:EEA82051.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
UDP-galactose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FPI7_9CLOT
L2_026_374G1_scaffold_272_12
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12158..12604
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FPI6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82050.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_026_374G1_scaffold_272_13
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12628..12945
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QSV4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24997.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_026_374G1_scaffold_272_14
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13374..16211
DNA (2838bp) protein (946aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PW65_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24994.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
polysaccharide biosynthesis protein
L2_026_374G1_scaffold_272_15
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16257..16859
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QST5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24992.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
UDP-galactose phosphate transferase
L2_026_374G1_scaffold_272_16
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16852..17460
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6Q2N9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24991.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family protein
L2_026_374G1_scaffold_272_17
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17461..18600
DNA (1140bp) protein (380aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AHX3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG90172.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
capsule biosynthesis protein CapM
L2_026_374G1_scaffold_272_18
Parabacteroides sp. CAG:409, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18597..19730
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:409 RepID=R7JKA0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDE64121.1}; TaxID=1262913 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:409.;"
polysaccharide pyruvyl transferase
L2_026_374G1_scaffold_272_19
Parabacteroides sp. CAG:409, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19768..20982
DNA (1215bp) protein (405aa)
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein n=1 Tax=Parabacteroides sp. CAG:409 RepID=R7JJP9_9PORP
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein {ECO:0000313|EMBL:CDE64120.1}; TaxID=1262913 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:409.;"
coenzyme F420-reducing hydrogenase
L2_026_374G1_scaffold_272_20
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21036..22043
DNA (1008bp) protein (336aa)
Glycosyltransferase group 2 family protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TI02_9CLOT
Glycosyltransferase group 2 family protein {ECO:0000313|EMBL:CCZ58621.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
glycosyl transferase
L2_026_374G1_scaffold_272_21
Olsenella profusa, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

22066..22623
DNA (558bp) protein (186aa)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=1125712 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella.;" source="Olsenella profusa F0195.;"
Serine acetyltransferase n=1 Tax=Olsenella profusa F0195 RepID=U2TIP0_9ACTN
serine O-acetyltransferase
L2_026_374G1_scaffold_272_22
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22641..23714
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8C4Y3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD22080.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L2_026_374G1_scaffold_272_23
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23727..24839
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8C5R3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD22081.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
glycosyltransferase
L2_026_374G1_scaffold_272_24
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24839..26071
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8C4T6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD22082.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
glycosyltransferase
L2_026_374G1_scaffold_272_25
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26201..26944
DNA (744bp) protein (248aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AHY0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG90179.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
dTDP-glucose pyrophosphorylase
L2_026_374G1_scaffold_272_26
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26984..27859
DNA (876bp) protein (292aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AHY1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG90180.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
hypothetical protein
L2_026_374G1_scaffold_272_27
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27840..28835
DNA (996bp) protein (332aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AHY2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG90181.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
hypothetical protein
L2_026_374G1_scaffold_272_28
unknown

Not on your lists

29128..29379
DNA (252bp) protein (84aa)

This feature has no annotations

L2_026_374G1_scaffold_272_29
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29390..29944
DNA (555bp) protein (185aa)
HAD hydrolase, family IA, variant 3 n=2 Tax=Ruminococcus lactaris RepID=B5CQS1_9FIRM
HAD hydrolase, family IA, variant 3 {ECO:0000313|EMBL:EDY32380.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
L2_026_374G1_scaffold_272_30
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29956..30264
DNA (309bp) protein (103aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AHY4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG90183.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
Displaying items 1-30 of 33 in total

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