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L2_026_374G1_scaffold_323

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_374G1_scaffold_323_1
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(58..207)
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CC55_001C RepID=V8BTN6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49552.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L2_026_374G1_scaffold_323_2
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(228..1451)
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B6G9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN76502.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L2_026_374G1_scaffold_323_3
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1461..2078)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U7B7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN49554.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Flp pilus assembly protein TadB
L2_026_374G1_scaffold_323_4
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2143..3378)
DNA (1236bp) protein (412aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=V8BTR2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD18180.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Flp pilus assembly protein, ATPase CpaF
L2_026_374G1_scaffold_323_5
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3375..4307)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B6H2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN76505.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L2_026_374G1_scaffold_323_6
unknown

Not on your lists

comp(4286..4510)
DNA (225bp) protein (75aa)

This feature has no annotations

L2_026_374G1_scaffold_323_7
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4546..4755)
DNA (210bp) protein (70aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5TMS5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD18182.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
SigmaK-factor processing regulatory protein BofA.
L2_026_374G1_scaffold_323_8
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4823..5311)
DNA (489bp) protein (163aa)
Deoxycytidylate deaminase (EC:3.5.4.12)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5UDU4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN49558.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L2_026_374G1_scaffold_323_9
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5326..5955)
DNA (630bp) protein (210aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Uracil phosphoribosyltransferase n=4 Tax=Clostridiales RepID=A7B6H6_RUMGN
uracil phosphoribosyltransferase
L2_026_374G1_scaffold_323_10
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5955..7526)
DNA (1572bp) protein (524aa)
Sua5/YciO/YrdC/YwlC family protein n=3 Tax=Lachnospiraceae RepID=A7B6H7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49560.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Sua5/YciO/YrdC/YwlC family protein
L2_026_374G1_scaffold_323_11
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7513..8235)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TUS7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67019.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
cell wall hydrolase/autolysin
L2_026_374G1_scaffold_323_12
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8311..10236)
DNA (1926bp) protein (642aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TMS1_9FIRM
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:CCZ67018.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
NADH:flavin oxidoreductases, Old Yellow Enzyme family
L2_026_374G1_scaffold_323_13
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10418..11353
DNA (936bp) protein (312aa)
Transcriptional regulator, AraC family n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B6I0_RUMGN
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EDN76513.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L2_026_374G1_scaffold_323_14
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11334..12182)
DNA (849bp) protein (283aa)
Transcriptional regulator AraC family n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U7B3_9FIRM
Transcriptional regulator AraC family {ECO:0000313|EMBL:CCZ67016.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
AraC family transcription regulator
L2_026_374G1_scaffold_323_15
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12366..13400
DNA (1035bp) protein (345aa)
Glycoside/pentoside/hexuronide transporter n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TMZ6_9FIRM
Glycoside/pentoside/hexuronide transporter {ECO:0000313|EMBL:CCZ67015.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
sugar (Glycoside-Pentoside-Hexuronide) transporter
L2_026_374G1_scaffold_323_16
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13394..13726
DNA (333bp) protein (111aa)
Glycoside/pentoside/hexuronide transporter n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B6I2_RUMGN
Glycoside/pentoside/hexuronide transporter {ECO:0000313|EMBL:EDN76515.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
sugar (Glycoside-Pentoside-Hexuronide) transporter
L2_026_374G1_scaffold_323_17
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13731..14483
DNA (753bp) protein (251aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=A7B6I3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:CCZ67014.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L2_026_374G1_scaffold_323_18
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14563..16500)
DNA (1938bp) protein (646aa)
SH3 domain protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B6I4_RUMGN
SH3 domain protein {ECO:0000313|EMBL:EDN76517.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Predicted glycosyl hydrolase
L2_026_374G1_scaffold_323_19
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16630..16857)
DNA (228bp) protein (76aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B6I5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49565.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L2_026_374G1_scaffold_323_20
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17386..18105
DNA (720bp) protein (240aa)
Negative regulator of genetic competence (MecA) n=4 Tax=Clostridiales RepID=A7B6I6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49566.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Negative regulator of genetic competence, sporulation and motility
L2_026_374G1_scaffold_323_21
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18172..18375)
DNA (204bp) protein (68aa)
Hydrid cluster protein-associated redox disulfide domain protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B6I7_RUMGN
Hydrid cluster protein-associated redox disulfide domain protein {ECO:0000313|EMBL:EDN76520.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Domain of unknown function (DUF1858).
L2_026_374G1_scaffold_323_22
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18876..19970)
DNA (1095bp) protein (365aa)
NlpC/P60 family protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B6J1_RUMGN
NlpC/P60 family protein {ECO:0000313|EMBL:EDN76524.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Cell wall-associated hydrolases (invasion-associated proteins)
L2_026_374G1_scaffold_323_23
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20283..20678
DNA (396bp) protein (132aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=R5TMR2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD18194.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Fe2+/Zn2+ uptake regulation proteins
L2_026_374G1_scaffold_323_24
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20780..21322
DNA (543bp) protein (181aa)
Rubredoxin n=4 Tax=Clostridiales RepID=A7B6J3_RUMGN
Rubredoxin {ECO:0000313|EMBL:EDN76526.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Rubrerythrin
L2_026_374G1_scaffold_323_25
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21349..21597)
DNA (249bp) protein (83aa)
GIY-YIG catalytic domain protein n=4 Tax=Clostridiales RepID=A7B6J4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49571.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
putative O-methyltransferase
L2_026_374G1_scaffold_323_26
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21714..22430)
DNA (717bp) protein (239aa)
Peptidase, M23 family n=4 Tax=Clostridiales RepID=A7B6J5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49572.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Membrane-bound metallopeptidase
L2_026_374G1_scaffold_323_27
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22473..23447)
DNA (975bp) protein (325aa)
SpoIID/LytB domain protein n=4 Tax=Clostridiales RepID=A7B6J6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD18198.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
SpoIID/LytB domain
L2_026_374G1_scaffold_323_28
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23497..24453)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B6J7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN76530.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L2_026_374G1_scaffold_323_29
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24464..26935)
DNA (2472bp) protein (824aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
glycogen/starch/alpha-glucan phosphorylases (EC:2.4.1.1)
Phosphorylase n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B6J8_RUMGN
L2_026_374G1_scaffold_323_30
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26941..30096)
DNA (3156bp) protein (1052aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=3 Tax=Lachnospiraceae RepID=A7B6J9_RUMGN
Displaying 30 items

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