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L2_026_374G1_scaffold_325

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_374G1_scaffold_325_1
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..93)
DNA (93bp) protein (31aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FUI3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80307.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L2_026_374G1_scaffold_325_2
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(203..712)
DNA (510bp) protein (170aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridium RepID=B6FUI4_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEA80308.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
antimicrobial peptide ABC transporter ATPase
L2_026_374G1_scaffold_325_3
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(792..1742)
DNA (951bp) protein (317aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FUI5_9CLOT
hypothetical protein
L2_026_374G1_scaffold_325_4
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1735..2421)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PYM0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23521.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_026_374G1_scaffold_325_5
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2675..2929
DNA (255bp) protein (85aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FUI8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23520.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Helix-turn-helix.
L2_026_374G1_scaffold_325_6
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3140..3346
DNA (207bp) protein (69aa)
Cold-shock DNA-binding domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FUI9_9CLOT
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:EEA80288.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
cold-shock DNA-binding domain-containing protein
L2_026_374G1_scaffold_325_7
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3517..4251
DNA (735bp) protein (245aa)
NAD-dependent protein deacetylases, SIR2 family (EC:3.5.1.-)
Transcriptional regulator, Sir2 family n=2 Tax=Clostridium RepID=B6FUJ0_9CLOT
Transcriptional regulator, Sir2 family {ECO:0000313|EMBL:EEA80289.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L2_026_374G1_scaffold_325_8
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4297..4767)
DNA (471bp) protein (157aa)
Lipoprotein signal peptidase {ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|SAAS:SAAS00112508};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FUJ1_9CLOT
peptidase A8 signal peptidase II
L2_026_374G1_scaffold_325_9
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4768..5244)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FUJ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80291.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_026_374G1_scaffold_325_10
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5267..6973)
DNA (1707bp) protein (569aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PJ27_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23515.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Subtilase family.
L2_026_374G1_scaffold_325_11
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7058..8332)
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PS19_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23514.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
sodium/proton-potassium antiporter GerN, CPA2 family (TC 2.A.37.2.2)
L2_026_374G1_scaffold_325_12
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8507..9955)
DNA (1449bp) protein (483aa)
ATP-dependent Clp protease, ATP-binding subunit ClpX n=2 Tax=Clostridium RepID=B6FUJ6_9CLOT
ATP-dependent Clp protease, ATP-binding subunit ClpX {ECO:0000313|EMBL:EEA80295.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
endopeptidase Clp ATP-binding regulatory subunit (clpX)
L2_026_374G1_scaffold_325_13
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10047..10976)
DNA (930bp) protein (310aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Thioredoxin reductase n=2 Tax=Clostridium RepID=B6FUJ7_9CLOT
hypothetical protein
L2_026_374G1_scaffold_325_14
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10987..11316)
DNA (330bp) protein (110aa)
Thioredoxin n=2 Tax=Clostridium RepID=R6PYL4_9CLOT
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
trxA; thioredoxin
L2_026_374G1_scaffold_325_15
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11406..12074)
DNA (669bp) protein (223aa)
Cyclic nucleotide-binding domain protein n=2 Tax=Clostridium RepID=B6FUJ9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23510.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
putative transcriptional regulator
L2_026_374G1_scaffold_325_16
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12078..14039)
DNA (1962bp) protein (654aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
DNA ligase, NAD-dependent (EC:6.5.1.2)
DNA ligase n=2 Tax=Clostridium RepID=B6FUK0_9CLOT
L2_026_374G1_scaffold_325_17
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14050..14811)
DNA (762bp) protein (254aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ribosomal large subunit pseudouridine synthase F (EC:5.4.99.- 5.4.99.12)
Pseudouridine synthase n=2 Tax=Clostridium RepID=B6FUK1_9CLOT
L2_026_374G1_scaffold_325_18
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14820..16112)
DNA (1293bp) protein (431aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Aspartyl aminopeptidase (EC:3.4.11.21)
M18 family aminopeptidase n=2 Tax=Clostridium RepID=B6FUK2_9CLOT
L2_026_374G1_scaffold_325_19
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16224..17552
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PYL2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23506.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
MATE efflux family protein
L2_026_374G1_scaffold_325_20
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17549..18037
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PJ18_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23505.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_026_374G1_scaffold_325_21
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18119..18526)
DNA (408bp) protein (136aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FVK6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23504.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_026_374G1_scaffold_325_22
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18590..18979)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FUK5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80274.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L2_026_374G1_scaffold_325_23
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18976..19773)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FUK7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80276.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Acetyltransferase (GNAT) family.
L2_026_374G1_scaffold_325_24
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19819..20313)
DNA (495bp) protein (165aa)
Acetyltransferase, GNAT family n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FUK8_9CLOT
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EEA80277.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
acetyltransferase
L2_026_374G1_scaffold_325_25
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20401..22473)
DNA (2073bp) protein (691aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FUK9_9CLOT
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EEA80278.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Molecular chaperone, HSP90 family
L2_026_374G1_scaffold_325_26
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22631..25876)
DNA (3246bp) protein (1082aa)
Efflux ABC transporter, permease protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FUL0_9CLOT
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EEA80279.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Predicted permease.
L2_026_374G1_scaffold_325_27
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25883..26587)
DNA (705bp) protein (235aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridium RepID=B6FUL1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23497.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
ABC-type antimicrobial peptide transport system, ATPase component
L2_026_374G1_scaffold_325_28
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26755..27255
DNA (501bp) protein (167aa)
Acetyltransferase, GNAT family n=2 Tax=Clostridium RepID=B6FUL2_9CLOT
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EEA80281.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
C_GCAxxG_C_C family protein
L2_026_374G1_scaffold_325_29
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27290..28300)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FUL3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80282.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_026_374G1_scaffold_325_30
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28313..29290)
DNA (978bp) protein (326aa)
xynB; Endo-1,4-beta-xylanase B (EC:3.2.1.8)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FUL4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80283.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Displaying items 1-30 of 31 in total

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