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L2_026_374G1_scaffold_418

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_374G1_scaffold_418_1
unknown

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comp(3..128)
DNA (126bp) protein (42aa)

This feature has no annotations

L2_026_374G1_scaffold_418_2
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(241..6786)
DNA (6546bp) protein (2182aa)
Outer membrane autotransporter barrel domain protein n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y850_9BURK
Outer membrane autotransporter barrel domain protein {ECO:0000313|EMBL:EFL82244.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
hypothetical protein
L2_026_374G1_scaffold_418_3
Xenorhabdus nematophila, Xenorhabdus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7103..9571)
DNA (2469bp) protein (823aa)
Conjugal transfer protein TraC n=1 Tax=Photorhabdus temperata J3 RepID=U7R1F9_PHOTE
Sex pilus assembly {ECO:0000313|EMBL:CEF32282.1}; TaxID=1437826 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Xenorhabdus.;" source="Xenorhabdus nematophila str. Websteri.;"
Sex pilus assembly
L2_026_374G1_scaffold_418_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9640..10545)
DNA (906bp) protein (302aa)
Uncharacterized protein n=3 Tax=Gammaproteobacteria RepID=C6GA31_AERHY
Uncharacterized protein {ECO:0000313|EMBL:ESP05811.1}; TaxID=1280986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 36 (4-5675286).;"
disulfide isomerase
L2_026_374G1_scaffold_418_5
unknown

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comp(10572..10925)
DNA (354bp) protein (118aa)

This feature has no annotations

L2_026_374G1_scaffold_418_6
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11094..11441)
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI0003777943
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV02138.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
L2_026_374G1_scaffold_418_7
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11428..12096)
DNA (669bp) protein (223aa)
Conjugative transfer protein TraV n=36 Tax=Gammaproteobacteria RepID=B6VP02_KLEPN
conjugal transfer protein TraV
Conjugative transfer protein TraV {ECO:0000313|EMBL:AKH10267.1}; Type IV conjugative transfer system protein {ECO:0000313|EMBL:ADV39902.1}; TaxID=59201 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica I.;"
L2_026_374G1_scaffold_418_8
Vibrio cholerae, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12113..13432)
DNA (1320bp) protein (440aa)
UPI0003D961BD related cluster n=1 Tax=unknown RepID=UPI0003D961BD
TraB {ECO:0000313|EMBL:AHC56430.1}; TaxID=666 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio cholerae.;"
conjugal transfer protein TraB
L2_026_374G1_scaffold_418_9
Xenorhabdus cabanillasii, Xenorhabdus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13447..14463)
DNA (1017bp) protein (339aa)
TraK conjugal transfer pilus assembly protein n=36 Tax=Gammaproteobacteria RepID=C4NVT7_ECOLX
conjugal transfer protein TraK
Uncharacterized protein {ECO:0000313|EMBL:CDL87073.1}; TaxID=1427517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Xenorhabdus.;" source="Xenorhabdus cabanillasii JM26.;"
L2_026_374G1_scaffold_418_10
Providencia stuartii, Providencia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14482..15189)
DNA (708bp) protein (236aa)
TraE n=22 Tax=Gammaproteobacteria RepID=C4NVT6_ECOLX
traE
IncF plasmid conjugative transfer pilus assembly protein TraE {ECO:0000313|EMBL:AIM48336.1}; TaxID=588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Providencia.;" source="Providencia stuartii.;"
L2_026_374G1_scaffold_418_11
Aeromonas salmonicida, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15186..15533)
DNA (348bp) protein (116aa)
TraL protein n=1 Tax=Aeromonas salmonicida (strain A449) RepID=A4SU84_AERS4
traL; TraL protein
TraL protein {ECO:0000313|EMBL:ABO92456.1}; TaxID=382245 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas salmonicida (strain A449).;"
L2_026_374G1_scaffold_418_12
Sutterella wadsworthensis, Sutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15813..17411
DNA (1599bp) protein (533aa)
Uncharacterized protein n=1 Tax=Sutterella wadsworthensis 2_1_59BFAA RepID=K1JK08_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EKB30536.1}; TaxID=742823 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Sutterella.;" source="Sutterella wadsworthensis 2_1_59BFAA.;"
transposase, IS605 OrfB family
L2_026_374G1_scaffold_418_13
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17437..18087)
DNA (651bp) protein (217aa)
Uncharacterized protein n=3 Tax=Gammaproteobacteria RepID=V4B5H0_ECOLX
Type VI secretion protein {ECO:0000313|EMBL:KGH12682.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
type VI secretion protein
L2_026_374G1_scaffold_418_14
Sutterella wadsworthensis CAG:135, Sutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18087..18386)
DNA (300bp) protein (100aa)
Uncharacterized protein n=2 Tax=Sutterella RepID=R5PS17_9BURK
Uncharacterized protein {ECO:0000313|EMBL:CCZ18978.1}; TaxID=1263111 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Sutterella; environmental samples.;" source="Sutterella wadsworthensis CAG:135.;"
histone family protein nucleoid-structuring protein H-NS
L2_026_374G1_scaffold_418_15
Cobetia marina, Cobetia, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18379..18657)
DNA (279bp) protein (93aa)
DNA-binding protein HupA n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6ISY3_RHOCS
hupA; DNA-binding protein HupA
Transcriptional regulator HU subunit alpha {ECO:0000313|EMBL:KGA03242.1}; TaxID=28258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Cobetia.;" source="Cobetia marina (Deleya marina).;"
L2_026_374G1_scaffold_418_16
unknown

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comp(18671..19744)
DNA (1074bp) protein (358aa)

This feature has no annotations

L2_026_374G1_scaffold_418_17
Alcanivorax sp. 19-m-6, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19957..21909)
DNA (1953bp) protein (651aa)
traD n=1 Tax=Vibrio splendidus RepID=UPI0002DBAF9B
TraD {ECO:0000313|EMBL:KGD63424.1}; TaxID=1177154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax sp. 19-m-6.;"
traD; type IV conjugative transfer system protein TraD
L2_026_374G1_scaffold_418_18
unknown

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22144..22320
DNA (177bp) protein (59aa)

This feature has no annotations

L2_026_374G1_scaffold_418_19
unknown

Not on your lists

22559..22681
DNA (123bp) protein (41aa)

This feature has no annotations

Displaying 19 items

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