ggKbase home page

L2_026_374G1_scaffold_505

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_374G1_scaffold_505_1
unknown

Not on your lists

3..74
DNA (72bp) protein (24aa)

This feature has no annotations

L2_026_374G1_scaffold_505_2
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

71..856
DNA (786bp) protein (262aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HIN5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJJ65938.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
hypothetical protein
L2_026_374G1_scaffold_505_3
unknown

Not on your lists

853..1014
DNA (162bp) protein (54aa)

This feature has no annotations

L2_026_374G1_scaffold_505_4
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

Not on your lists

1125..1322
DNA (198bp) protein (66aa)
Putative stress-responsive transcriptional regulator n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6WC22_9FIRM
Putative stress-responsive transcriptional regulator {ECO:0000313|EMBL:CDC91767.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
phage shock protein C, PspC
L2_026_374G1_scaffold_505_5
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1438..3750)
DNA (2313bp) protein (771aa)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
ribonucleoside-diphosphate reductase, alpha subunit (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQ48_9FIRM
L2_026_374G1_scaffold_505_6
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3833..4876)
DNA (1044bp) protein (348aa)
Ribonucleoside-diphosphate reductase subunit beta {ECO:0000256|PIRNR:PIRNR000355}; EC=1.17.4.1 {ECO:0000256|PIRNR:PIRNR000355};; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Ribonucleotide reductase, beta subunit (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase subunit beta n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQ49_9FIRM
L2_026_374G1_scaffold_505_7
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5037..5912
DNA (876bp) protein (292aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HIP8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJJ75075.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
hypothetical protein
L2_026_374G1_scaffold_505_8
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5938..8187)
DNA (2250bp) protein (750aa)
Diguanylate cyclase (GGDEF) domain n=1 Tax=Clostridium sp. CAG:149 RepID=R5MKK0_9CLOT
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EFE14668.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
diguanylate cyclase (GGDEF) domain
L2_026_374G1_scaffold_505_9
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8436..9110
DNA (675bp) protein (225aa)
Response regulator receiver domain protein n=2 Tax=Clostridium RepID=B6FL25_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:EEA83280.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_026_374G1_scaffold_505_10
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9107..10324
DNA (1218bp) protein (406aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1PTU7_9FIRM
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
L2_026_374G1_scaffold_505_11
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

10417..11025
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5H9C3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY26310.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hypothetical protein
L2_026_374G1_scaffold_505_12
Lachnospiraceae bacterium JC7, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11130..12692
DNA (1563bp) protein (521aa)
Putative uncharacterized protein n=1 Tax=Slackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029 / RHS 1) RepID=C7N2X9_SLAHD
Uncharacterized protein {ECO:0000313|EMBL:ETP72278.1}; Flags: Precursor;; TaxID=1165092 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium JC7.;"
hypothetical protein
L2_026_374G1_scaffold_505_13
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12738..13520)
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Butyrivibrio sp. NC2007 RepID=UPI0003B69A4B
hypothetical protein
UPF0246 protein CK3_07360 {ECO:0000256|HAMAP-Rule:MF_00652}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L2_026_374G1_scaffold_505_14
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13552..14835)
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5F568_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY00185.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
TRAP dicarboxylate transporter subunit DctM
L2_026_374G1_scaffold_505_15
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14837..15430)
DNA (594bp) protein (198aa)
Uncharacterized protein n=10 Tax=Clostridium RepID=N9VZ75_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ13633.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
tripartite ATP-independent periplasmic transporter DctQ
L2_026_374G1_scaffold_505_16
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15442..16467)
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5F5P9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY00183.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
TRAP dicarboxylate transporter subunit DctP
L2_026_374G1_scaffold_505_17
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17745..18347)
DNA (603bp) protein (201aa)
Site-specific recombinase/integrase n=1 Tax=Clostridium clostridioforme 90A4 RepID=R0CE46_9CLOT
Site-specific recombinase XerD
Uncharacterized protein {ECO:0000313|EMBL:EHF03421.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Displaying 17 items

View Taxonomy