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L2_031_000G1_scaffold_3267

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_000G1_scaffold_3267_1
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..1367
DNA (1365bp) protein (455aa)
Fe-S oxidoreductase (EC:4.-.-.-)
Radical SAM domain protein n=3 Tax=Lachnospiraceae RepID=A7B5A9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN44697.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L2_031_000G1_scaffold_3267_2
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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1364..1684
DNA (321bp) protein (107aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Endonuclease III n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TPU7_9FIRM
hypothetical protein
L2_031_000G1_scaffold_3267_3
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1851..2888
DNA (1038bp) protein (346aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B5B2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17637.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Hydrogenase maturation factor
L2_031_000G1_scaffold_3267_4
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2903..3109
DNA (207bp) protein (69aa)
Transcriptional regulator, AsnC family n=4 Tax=Clostridiales RepID=A7B5B3_RUMGN
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:EDN76855.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Transcriptional regulators
L2_031_000G1_scaffold_3267_5
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3137..3523
DNA (387bp) protein (129aa)
Aminotransferase, class I/II n=4 Tax=Clostridiales RepID=A7B5B4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17639.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L2_031_000G1_scaffold_3267_6
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3520..3990
DNA (471bp) protein (157aa)
Aminotransferase, class I/II {ECO:0000313|EMBL:EDN76856.1}; EC=2.6.1.- {ECO:0000313|EMBL:EDN76856.1};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Aminotransferase, class I/II n=4 Tax=Clostridiales RepID=A7B5B4_RUMGN
hypothetical protein
L2_031_000G1_scaffold_3267_7
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3984..4484
DNA (501bp) protein (167aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Predicted rRNA methylase (SpoU class) (EC:2.1.1.-)
tRNA (Cytidine(34)-2'-O)-methyltransferase n=4 Tax=Clostridiales RepID=V8BS50_RUMGN
L2_031_000G1_scaffold_3267_8
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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4673..5698
DNA (1026bp) protein (342aa)
Kinase, PfkB family n=4 Tax=Clostridiales RepID=A7B5B7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN44691.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
PfkB domain-containing protein
L2_031_000G1_scaffold_3267_9
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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5957..6268
DNA (312bp) protein (104aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B5B9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN44690.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L2_031_000G1_scaffold_3267_10
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6298..8310
DNA (2013bp) protein (671aa)
Archaeal/vacuolar-type H+-ATPase subunit I (EC:3.6.3.14)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TPH5_9FIRM
V-type ATP synthase subunit I {ECO:0000256|RuleBase:RU361189}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_031_000G1_scaffold_3267_11
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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8313..8798
DNA (486bp) protein (162aa)
V-type sodium ATPase, K subunit {ECO:0000313|EMBL:EDN76863.1}; EC=3.6.3.14 {ECO:0000313|EMBL:EDN76863.1};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
ATP synthase subunit C. (EC:3.6.3.14)
V-type sodium ATPase, K subunit n=4 Tax=Clostridiales RepID=A7B5C1_RUMGN
L2_031_000G1_scaffold_3267_12
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8839..9363
DNA (525bp) protein (175aa)
Archaeal/vacuolar-type H+-ATPase subunit E (EC:3.6.3.14)
V-type proton ATPase subunit E n=4 Tax=Clostridiales RepID=A7B5C2_RUMGN
V-type proton ATPase subunit E {ECO:0000256|HAMAP-Rule:MF_00311}; V-ATPase subunit E {ECO:0000256|HAMAP-Rule:MF_00311}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Displaying 12 items

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