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L2_031_000G1_scaffold_36

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Displaying items 1-30 of 138 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_000G1_scaffold_36_1
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(648..1652)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9D0E5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKU78034.1}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
periplasmic binding protein
L2_031_000G1_scaffold_36_2
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1710..2465)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9D151_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKU78033.1}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
ABC transporter
L2_031_000G1_scaffold_36_3
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2455..3522)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9DGN7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKU78032.1}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
transporter permease
L2_031_000G1_scaffold_36_4
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3725..4114)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9D4B8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKU78031.1}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
hypothetical protein
L2_031_000G1_scaffold_36_5
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4368..4577)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9DKV8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKU78030.1}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
L2_031_000G1_scaffold_36_6
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4680..4895)
DNA (216bp) protein (72aa)
Peptidase T-like protein n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9D0E0_9FIRM
Peptidase T-like protein {ECO:0000313|EMBL:EKU78029.1}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
peptidase T
L2_031_000G1_scaffold_36_7
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4970..5713)
DNA (744bp) protein (248aa)
Peptidase T n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9D148_9FIRM
Peptidase T {ECO:0000313|EMBL:EKU78028.1}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
peptidase T
L2_031_000G1_scaffold_36_8
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5829..5945)
DNA (117bp) protein (39aa)
Uncharacterized protein n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9D4B4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKU78026.1}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
L2_031_000G1_scaffold_36_9
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6164..7435)
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9DKV2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKU78025.1}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
major facilitator superfamily protein
L2_031_000G1_scaffold_36_10
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7818..8720)
DNA (903bp) protein (301aa)
Protein-export membrane protein SecF n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9D0D6_9FIRM
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
protein-export membrane protein SecF
L2_031_000G1_scaffold_36_11
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8720..9976)
DNA (1257bp) protein (419aa)
Protein translocase subunit SecD n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9D146_9FIRM
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
protein-export membrane protein SecD
L2_031_000G1_scaffold_36_12
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10029..10577)
DNA (549bp) protein (183aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9DGN1_9FIRM
5-formyltetrahydrofolate cyclo-ligase
L2_031_000G1_scaffold_36_13
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10594..10875)
DNA (282bp) protein (94aa)
Preprotein translocase, YajC subunit n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9D4A9_9FIRM
Preprotein translocase, YajC subunit {ECO:0000313|EMBL:EKU78021.1}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
preprotein translocase subunit YajC
L2_031_000G1_scaffold_36_14
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10927..12036)
DNA (1110bp) protein (370aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
Queuine tRNA-ribosyltransferase n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9DKU9_9FIRM
queuine tRNA-ribosyltransferase
L2_031_000G1_scaffold_36_15
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12092..13114)
DNA (1023bp) protein (341aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9D0D1_9FIRM
S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
L2_031_000G1_scaffold_36_16
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13232..14698)
DNA (1467bp) protein (489aa)
SpoIID/LytB domain-containing protein n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9D141_9FIRM
SpoIID/LytB domain-containing protein {ECO:0000313|EMBL:EKU78018.1}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
SpoIID/LytB domain-containing protein
L2_031_000G1_scaffold_36_17
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14695..15744)
DNA (1050bp) protein (350aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9DGM7_9FIRM
Holliday junction DNA helicase RuvB
L2_031_000G1_scaffold_36_18
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15747..16355)
DNA (609bp) protein (203aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9D4A7_9FIRM
Holliday junction DNA helicase RuvA
L2_031_000G1_scaffold_36_19
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16394..16894)
DNA (501bp) protein (167aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9DKU3_9FIRM
crossover junction endodeoxyribonuclease RuvC
L2_031_000G1_scaffold_36_20
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17039..17764)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9D0C9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKU78014.1}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
peptidase C26
L2_031_000G1_scaffold_36_21
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17911..18732)
DNA (822bp) protein (274aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9D140_9FIRM
tRNA (guanine-N1)-methyltransferase
L2_031_000G1_scaffold_36_22
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18791..19288)
DNA (498bp) protein (166aa)
Ribosome maturation factor RimM n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9DGM1_9FIRM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
16S rRNA processing protein RimM
L2_031_000G1_scaffold_36_23
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19288..19695)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9D4A3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKU78011.1}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
hypothetical protein
L2_031_000G1_scaffold_36_24
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19709..19936)
DNA (228bp) protein (76aa)
UPF0109 protein HMPREF9282_01568 n=2 Tax=Veillonella RepID=K9DKU0_9FIRM
UPF0109 protein HMPREF9282_01568 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
RNA-binding protein
L2_031_000G1_scaffold_36_25
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(19958..20221)
DNA (264bp) protein (88aa)
30S ribosomal protein S16 n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9D0C4_9FIRM
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
30S ribosomal protein S16
L2_031_000G1_scaffold_36_26
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(20258..21616)
DNA (1359bp) protein (453aa)
Signal recognition particle protein n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9D135_9FIRM
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
signal recognition particle protein
L2_031_000G1_scaffold_36_27
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21618..21968)
DNA (351bp) protein (117aa)
UPF0122 protein HMPREF9282_01565 n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9DGL8_9FIRM
UPF0122 protein HMPREF9282_01565 {ECO:0000256|HAMAP-Rule:MF_00245}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
helix-turn-helix protein YlxM/p13 family protein
L2_031_000G1_scaffold_36_28
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(22595..24763)
DNA (2169bp) protein (723aa)
Heavy metal translocating P-type ATPase n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9D499_9FIRM
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EKU78006.1}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
copper-translocating P-type ATPase
L2_031_000G1_scaffold_36_29
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24859..25128)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9DKT5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKU78005.1}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
hypothetical protein
L2_031_000G1_scaffold_36_30
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

25444..26076
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9D0C0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKU78004.1}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
hypothetical protein
Displaying items 1-30 of 138 in total

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