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L2_031_000G1_scaffold_39

Search features with annotation key words

Displaying items 1-30 of 116 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_000G1_scaffold_39_1
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..175
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WL84_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ03625.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
hypothetical protein
L2_031_000G1_scaffold_39_2
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

290..1144
DNA (855bp) protein (285aa)
Putative membrane protein n=2 Tax=Clostridium botulinum B RepID=B2TQT3_CLOBB
transporter
Transporter {ECO:0000313|EMBL:CDM68236.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L2_031_000G1_scaffold_39_3
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1308..1994
DNA (687bp) protein (229aa)
Cell division ATP-binding protein FtsE n=2 Tax=Clostridium botulinum E RepID=B2UZZ4_CLOBA
ftsE; cell division ATP-binding protein FtsE
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:EES50086.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
L2_031_000G1_scaffold_39_4
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1984..2874
DNA (891bp) protein (297aa)
Cell division protein FtsX n=1 Tax=Clostridium sp. DL-VIII RepID=G7MAN8_9CLOT
ftsX-like permease family protein
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_031_000G1_scaffold_39_5
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2944..4173
DNA (1230bp) protein (410aa)
peptidase S41 n=1 Tax=Clostridium botulinum RepID=UPI000308F5A3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY83016.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_031_000G1_scaffold_39_6
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4188..5480
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4N5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99526.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L2_031_000G1_scaffold_39_7

Not on your lists

5741..7702
DNA (1962bp) protein (654aa)
UvrABC system protein B n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MWS6_CLOSA
UvrABC system protein B {ECO:0000313|EMBL:ETJ16602.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
uvrB; UvrABC system protein B
L2_031_000G1_scaffold_39_8
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7729..9099
DNA (1371bp) protein (457aa)
Uncharacterized protein n=1 Tax=Clostridium botulinum (strain H04402 065 / Type A5) RepID=E8ZQX2_CLOB0
Uncharacterized protein {ECO:0000313|EMBL:KIN80874.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
hypothetical protein
L2_031_000G1_scaffold_39_9
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9318..12140
DNA (2823bp) protein (941aa)
UvrABC system protein A n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QIG7_9CLOT
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
uvrA; UvrABC system protein A
L2_031_000G1_scaffold_39_10
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12237..12677
DNA (441bp) protein (147aa)
FHA-domain containing secreted protein n=2 Tax=Clostridium botulinum E RepID=B2UZY8_CLOBA
FHA-domain containing protein
Signal peptide protein {ECO:0000313|EMBL:KIL08135.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L2_031_000G1_scaffold_39_11
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12701..13924
DNA (1224bp) protein (408aa)
Putative FtsW-like protein RodA n=1 Tax=Clostridium intestinale URNW RepID=U2N0S6_9CLOT
Cell division protein FtsW {ECO:0000313|EMBL:KJU72294.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
cell cycle family protein
L2_031_000G1_scaffold_39_12
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13927..15399
DNA (1473bp) protein (491aa)
Penicillin-binding protein transpeptidase n=1 Tax=Clostridium sp. DL-VIII RepID=G7MAN1_9CLOT
Penicillin-binding protein transpeptidase {ECO:0000313|EMBL:EHJ02290.1}; Flags: Precursor;; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
penicillin-binding protein
L2_031_000G1_scaffold_39_13
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15580..17451
DNA (1872bp) protein (624aa)
UvrABC system protein C n=1 Tax=Clostridium colicanis 209318 RepID=N9Y625_9CLOT
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
uvrC; excinuclease ABC subunit C
L2_031_000G1_scaffold_39_14
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17576..18493
DNA (918bp) protein (306aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Clostridium colicanis 209318 RepID=N9WLA4_9CLOT
murB; UDP-N-acetylenolpyruvoylglucosamine reductase
L2_031_000G1_scaffold_39_15
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18688..19011
DNA (324bp) protein (108aa)
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:AIY83006.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_031_000G1_scaffold_39_16
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19412..20290
DNA (879bp) protein (293aa)
UPF0042 nucleotide-binding protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HH27_9CLOT
P-loop ATPase family protein
Nucleotide-binding protein UC77_06170 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L2_031_000G1_scaffold_39_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20287..21636
DNA (1350bp) protein (450aa)
Putative gluconeogenesis factor n=2 Tax=Clostridium butyricum RepID=B1QWJ8_CLOBU
Putative gluconeogenesis factor {ECO:0000256|HAMAP-Rule:MF_00973}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L2_031_000G1_scaffold_39_18
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21746..22693
DNA (948bp) protein (316aa)
Sporulation protein n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FY45_CLOPA
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420, ECO:0000256|SAAS:SAAS00005305}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
hypothetical protein
L2_031_000G1_scaffold_39_19
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22709..26287
DNA (3579bp) protein (1193aa)
dnaE; DNA polymerase III, alpha subunit (EC:2.7.7.7)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170, ECO:0000313|EMBL:AIY84634.1};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
DNA polymerase III, alpha subunit n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HIJ6_9CLOT
L2_031_000G1_scaffold_39_20
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26697..27656
DNA (960bp) protein (320aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
pfkA; 6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=1 Tax=Clostridium colicanis 209318 RepID=N9WKN8_9CLOT
L2_031_000G1_scaffold_39_21
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27721..29139
DNA (1419bp) protein (473aa)
pyk; pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504, ECO:0000313|EMBL:AIY83287.1}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504, ECO:0000313|EMBL:AIY83287.1};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Pyruvate kinase n=1 Tax=Clostridium intestinale URNW RepID=U2PZD1_9CLOT
L2_031_000G1_scaffold_39_22
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30110..30472
DNA (363bp) protein (121aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2UZX6_CLOBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIL08126.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L2_031_000G1_scaffold_39_23
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30539..31909
DNA (1371bp) protein (457aa)
rumA; 23S rRNA (uracil-5-)-methyltransferase RumA (EC:2.1.1.-)
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:ACD24021.1}; EC=2.1.1.- {ECO:0000313|EMBL:ACD24021.1};; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
RNA methyltransferase n=1 Tax=Clostridium botulinum RepID=UPI0002E83447
L2_031_000G1_scaffold_39_24
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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32134..33264
DNA (1131bp) protein (377aa)
Putative chlorophyll synthesis pathway protein BchC n=1 Tax=Desulfitobacterium hafniense DP7 RepID=G9XUS0_DESHA
Putative chlorophyll synthesis pathway protein BchC {ECO:0000313|EMBL:EHL04642.1}; TaxID=537010 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense DP7.;"
hypothetical protein
L2_031_000G1_scaffold_39_25
unknown

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comp(33363..33689)
DNA (327bp) protein (109aa)

This feature has no annotations

L2_031_000G1_scaffold_39_26
unknown

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comp(33835..34134)
DNA (300bp) protein (100aa)

This feature has no annotations

L2_031_000G1_scaffold_39_27
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34254..34988
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AA67_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ96625.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
L2_031_000G1_scaffold_39_28
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35173..36075
DNA (903bp) protein (301aa)
Cation efflux family protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6G629_9CLOT
Cation efflux family protein {ECO:0000313|EMBL:CDB16964.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
cation efflux family protein
L2_031_000G1_scaffold_39_29
Acetohalobium arabaticum, Acetohalobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36233..37408
DNA (1176bp) protein (392aa)
Sodium/proton antiporter, CPA1 family (TC 2.A.36) n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QPG8_ACEAZ
sodium/proton antiporter
Sodium/proton antiporter, CPA1 family (TC 2.A.36) {ECO:0000313|EMBL:ADL12409.1}; TaxID=574087 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halobacteroidaceae; Acetohalobium.;" source="Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288).;"
L2_031_000G1_scaffold_39_30
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37479..38315
DNA (837bp) protein (279aa)
Putative Transcriptional regulator, RpiR family n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EWZ4_9CLOT
Putative Transcriptional regulator, RpiR family {ECO:0000313|EMBL:CDG00751.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
RpiR family phosphosugar-binding transcriptional regulator
Displaying items 1-30 of 116 in total

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