ggKbase home page

L2_031_000G1_scaffold_46

Search features with annotation key words

Displaying items 1-30 of 114 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_000G1_scaffold_46_1
unknown

Not on your lists

comp(76..186)
DNA (111bp) protein (37aa)

This feature has no annotations

L2_031_000G1_scaffold_46_2
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(295..711)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AR99_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ97198.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
putative transmembrane protein
L2_031_000G1_scaffold_46_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(695..865)
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z6H7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35275.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Transcriptional regulator, HTH-type
L2_031_000G1_scaffold_46_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1022..2410)
DNA (1389bp) protein (463aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z601_CLOBU
integral membrane sensor signal transduction histidine kinase
L2_031_000G1_scaffold_46_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2380..3042)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ATB9_CLOBU
Response regulator {ECO:0000313|EMBL:KJZ88306.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
two component transcriptional regulator
L2_031_000G1_scaffold_46_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3079..3855)
DNA (777bp) protein (259aa)
Putative lantibiotic ABC transporter, permease protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JL56_CLOBU
Putative lantibiotic ABC transporter, permease protein {ECO:0000313|EMBL:EEP55056.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
antibiotic transport-associated permease spaG/mutG
L2_031_000G1_scaffold_46_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3859..4608)
DNA (750bp) protein (250aa)
Antibiotic permease protein SpaE/mutE n=2 Tax=Clostridium butyricum RepID=B1QVH3_CLOBU
Putative lantibiotic ABC transporter, permease protein {ECO:0000313|EMBL:EEP54241.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
antibiotic permease spaE/mutE
L2_031_000G1_scaffold_46_8
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4612..5319)
DNA (708bp) protein (236aa)
Antibiotic ABC transporter, ATP-binding protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K6H5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ86295.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
ABC transporter
L2_031_000G1_scaffold_46_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5739..5918
DNA (180bp) protein (60aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QVH5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ88256.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_031_000G1_scaffold_46_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5922..7073)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ATC1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35282.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
deaminase
L2_031_000G1_scaffold_46_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7322..8482)
DNA (1161bp) protein (387aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1QVH7_CLOBU
Arginine/ornithine antiporter ArcD {ECO:0000313|EMBL:KJZ88297.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_031_000G1_scaffold_46_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8696..10078)
DNA (1383bp) protein (461aa)
Mate efflux family protein n=2 Tax=Clostridium butyricum RepID=B1QVH8_CLOBU
Mate efflux family protein {ECO:0000313|EMBL:EEP54719.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
MATE efflux family protein
L2_031_000G1_scaffold_46_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10191..10943)
DNA (753bp) protein (251aa)
TIGR00245 family protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z6I5_CLOBU
TIGR00245 family protein {ECO:0000313|EMBL:ENZ35285.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L2_031_000G1_scaffold_46_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10943..11602)
DNA (660bp) protein (220aa)
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEP53447.1}; EC=3.6.3.27 {ECO:0000313|EMBL:EEP53447.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
Phosphate import ATP-binding protein PstB 1 n=2 Tax=Clostridium butyricum RepID=B1QVI0_CLOBU
ABC transporter family protein
L2_031_000G1_scaffold_46_15
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11743..12048)
DNA (306bp) protein (102aa)
Transcriptional regulator, PadR family n=4 Tax=Clostridium butyricum RepID=B1QVI1_CLOBU
Transcriptional regulator, PadR family {ECO:0000313|EMBL:KJZ88346.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_031_000G1_scaffold_46_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12235..13542)
DNA (1308bp) protein (436aa)
Glycosyl hydrolase, family 5 n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JJU3_CLOBU
Choline binding protein A {ECO:0000313|EMBL:KJZ88294.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_031_000G1_scaffold_46_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13847..14941
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K6G7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35289.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L2_031_000G1_scaffold_46_18
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15053..15700)
DNA (648bp) protein (216aa)
Putative membrane protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KER8_CLOBU
Putative membrane protein {ECO:0000313|EMBL:KJZ88329.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_031_000G1_scaffold_46_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15786..16694)
DNA (909bp) protein (303aa)
UPI0003D6873C related cluster n=1 Tax=unknown RepID=UPI0003D6873C
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ETI90500.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
ABC transporter ATP-binding protein
L2_031_000G1_scaffold_46_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16651..17082)
DNA (432bp) protein (144aa)
UPI0003D5F225 related cluster n=1 Tax=unknown RepID=UPI0003D5F225
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ETI90499.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
GntR-family transcriptional regulator
L2_031_000G1_scaffold_46_21
unknown

Not on your lists

comp(17109..17213)
DNA (105bp) protein (35aa)

This feature has no annotations

L2_031_000G1_scaffold_46_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17376..18059)
DNA (684bp) protein (228aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JJT3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35293.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
molybdopterin-guanine dinucleotide biosynthesis protein A
L2_031_000G1_scaffold_46_23
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18049..20331)
DNA (2283bp) protein (761aa)
xdhD; hypoxanthine oxidase XdhD (EC:1.-.-.-)
Putative xanthine dehydrogenase, molybdopterin-binding subunit n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K6G5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ97457.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
L2_031_000G1_scaffold_46_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20334..20792)
DNA (459bp) protein (153aa)
hcrC; 4-hydroxybenzoyl-CoA reductase subunit gamma (EC:1.3.7.9)
Carbon-monoxide dehydrogenase small subunit n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z6J1_CLOBU
Carbon-monoxide dehydrogenase small subunit {ECO:0000313|EMBL:ENZ35295.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L2_031_000G1_scaffold_46_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20898..21680)
DNA (783bp) protein (261aa)
Molybdopterin dehydrogenase, FAD-binding n=3 Tax=Clostridium butyricum RepID=C4IFT4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35296.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein
L2_031_000G1_scaffold_46_26
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21773..23095)
DNA (1323bp) protein (441aa)
Xanthine permease n=4 Tax=Clostridium butyricum RepID=B1QVJ2_CLOBU
Uracil-xanthine permease {ECO:0000313|EMBL:KJZ88296.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
uracil-xanthine permease
L2_031_000G1_scaffold_46_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23539..24576
DNA (1038bp) protein (346aa)
Selenide, water dikinase {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883}; EC=2.7.9.3 {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883};; Selenium donor protein {ECO:0000256|HAMAP-Rule:MF_00625}; Selenophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00625}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
selD; selenide, water dikinase (EC:2.7.9.3)
Selenide, water dikinase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AG02_CLOBU
L2_031_000G1_scaffold_46_28
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24684..25280)
DNA (597bp) protein (199aa)
Selenium metabolism protein YedF n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ARB6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ88309.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
yedF2; selenium metabolism protein YedF
L2_031_000G1_scaffold_46_29
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25538..26590)
DNA (1053bp) protein (351aa)
Putative xanthine dehydrogenase accessory factor subfamily, putative n=2 Tax=Clostridium butyricum RepID=B1QVJ5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ97458.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
XshC-Cox1-family protein
L2_031_000G1_scaffold_46_30
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26609..27463)
DNA (855bp) protein (285aa)
UPI0003D66243 related cluster n=1 Tax=unknown RepID=UPI0003D66243
Uncharacterized protein {ECO:0000313|EMBL:KJZ86289.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
selenium-dependent molybdenum hydroxylase system protein, YqeB family
Displaying items 1-30 of 114 in total

View Taxonomy