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L2_031_000G1_scaffold_58

Search features with annotation key words

Displaying items 1-30 of 103 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_000G1_scaffold_58_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(147..614)
DNA (468bp) protein (156aa)
Competence/damage-inducible protein CinA C-domain n=4 Tax=Clostridium butyricum RepID=B1R0T7_CLOBU
Competence/damage-inducible protein CinA C-domain {ECO:0000313|EMBL:EEP56109.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
competence protein CinA
L2_031_000G1_scaffold_58_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(721..1701)
DNA (981bp) protein (327aa)
Phosphohydrolase n=3 Tax=Clostridium butyricum RepID=M8K8Q9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ32341.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
metallophosphoesterase
L2_031_000G1_scaffold_58_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1960..2439)
DNA (480bp) protein (160aa)
S-ribosylhomocysteine lyase {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059628};; AI-2 synthesis protein {ECO:0000256|HAMAP-Rule:MF_00091}; Autoinducer-2 production protein LuxS {ECO:0000256|HAMAP-Rule:MF_00091}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
LuxS protein involved in autoinducer AI2 synthesis (EC:4.4.1.21)
S-ribosylhomocysteine lyase n=2 Tax=Clostridium butyricum RepID=N9YY19_CLOBU
L2_031_000G1_scaffold_58_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2423..2545)
DNA (123bp) protein (41aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JDY8_CLOBU
Methionine transporter MetT {ECO:0000313|EMBL:KJZ84049.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
L2_031_000G1_scaffold_58_5
Dehalobacter sp. UNSWDHB, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3860..4240)
DNA (381bp) protein (127aa)
FeS cluster assembly scaffold IscU n=1 Tax=Clostridium botulinum RepID=UPI000370467A
Iron-sulfur cluster assembly scaffold protein IscU {ECO:0000313|EMBL:EQB22675.1}; TaxID=1339256 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter sp. UNSWDHB.;"
hypothetical protein
L2_031_000G1_scaffold_58_6
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4782..5867
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7ELP5_CLOPA
YibE/F-like family protein {ECO:0000313|EMBL:KIE47545.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein
L2_031_000G1_scaffold_58_7
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6139..6513)
DNA (375bp) protein (125aa)
UPF0251 protein CKL_0634 n=2 Tax=Clostridium kluyveri RepID=A5N5V7_CLOK5
UPF0251 protein CTM_10601 {ECO:0000256|HAMAP-Rule:MF_00674}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;"
hypothetical protein
L2_031_000G1_scaffold_58_8
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6645..7112)
DNA (468bp) protein (156aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Peptide deformylase; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;"
def; peptide deformylase (EC:3.5.1.88)
peptide deformylase n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2CC9E
L2_031_000G1_scaffold_58_9
unknown

Not on your lists

comp(7253..7435)
DNA (183bp) protein (61aa)

This feature has no annotations

L2_031_000G1_scaffold_58_10
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7592..8419)
DNA (828bp) protein (276aa)
ATPase-like, ParA/MinD n=1 Tax=Clostridium sp. DL-VIII RepID=G7M9N7_9CLOT
ATPase-like, ParA/MinD {ECO:0000313|EMBL:EHJ01194.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
ATPase-like, ParA/MinD
L2_031_000G1_scaffold_58_11
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8738..9193)
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI0003647052
UPF0251 protein CDLVIII_4690 {ECO:0000256|HAMAP-Rule:MF_00674}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
DNA-binding protein
L2_031_000G1_scaffold_58_12
Clostridium kluyveri, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9193..9636)
DNA (444bp) protein (148aa)
Predicted ferric uptake regulator n=2 Tax=Clostridium kluyveri RepID=A5N3D9_CLOK5
ferric uptake regulator
Predicted ferric uptake regulator {ECO:0000313|EMBL:EDK35635.1}; TaxID=431943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680).;"
L2_031_000G1_scaffold_58_13
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9654..10010)
DNA (357bp) protein (119aa)
Dinitrogenase iron-molybdenum cofactor family protein n=2 Tax=Clostridium botulinum RepID=B1IGX3_CLOBK
dinitrogenase iron-molybdenum cofactor family protein
Dinitrogenase iron-molybdenum cofactor family protein {ECO:0000313|EMBL:ACA44281.1}; TaxID=498213 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Okra / Type B1).;"
L2_031_000G1_scaffold_58_14
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10163..11011)
DNA (849bp) protein (283aa)
(4Fe-4S)-binding protein n=1 Tax=Clostridium botulinum RepID=UPI00036C86AC
CobQ/CobB/MinD/ParA family protein {ECO:0000313|EMBL:KAJ51938.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;"
ATP-binding protein
L2_031_000G1_scaffold_58_15
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11002..11832)
DNA (831bp) protein (277aa)
(4Fe-4S)-binding protein n=1 Tax=Clostridium botulinum RepID=UPI000382DB84
CobQ/CobB/MinD/ParA family protein {ECO:0000313|EMBL:KAJ51939.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;"
iron-sulfur binding protein
L2_031_000G1_scaffold_58_16
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11851..12216)
DNA (366bp) protein (122aa)
diguanylate cyclase n=1 Tax=Clostridium botulinum RepID=UPI0003691F9A
Dinitrogenase iron-molybdenum cofactor family protein {ECO:0000313|EMBL:EHN13269.1}; TaxID=1075091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes PA 3679.;"
glycine-rich cell wall structural protein precursor
L2_031_000G1_scaffold_58_17
Clostridium kluyveri, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12376..12753)
DNA (378bp) protein (126aa)
FeS cluster assembly scaffold IscU n=1 Tax=Clostridium botulinum RepID=UPI000370467A
hypothetical protein
NifU-like protein {ECO:0000313|EMBL:EDK35633.1}; TaxID=431943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680).;"
L2_031_000G1_scaffold_58_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13008..14621
DNA (1614bp) protein (538aa)
Permease n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IBR1_CLOBU
Permease {ECO:0000313|EMBL:EEP56290.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
permease
L2_031_000G1_scaffold_58_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14676..15503
DNA (828bp) protein (276aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1R0S0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP55968.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L2_031_000G1_scaffold_58_20
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15858..16049)
DNA (192bp) protein (64aa)
UPF0251 protein CDLVIII_4690 n=1 Tax=Clostridium sp. DL-VIII RepID=G7M9N5_9CLOT
UPF0251 protein CDLVIII_4690 {ECO:0000256|HAMAP-Rule:MF_00674}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
DNA-binding protein
L2_031_000G1_scaffold_58_21
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16190..16912)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TTQ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ50142.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
L2_031_000G1_scaffold_58_22
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17026..17406)
DNA (381bp) protein (127aa)
Desulfoferrodoxin n=4 Tax=Clostridium butyricum RepID=B1R0S1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ91870.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
desulfoferrodoxin
L2_031_000G1_scaffold_58_23
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17465..18052)
DNA (588bp) protein (196aa)
Rubrerythrin n=4 Tax=Clostridium butyricum RepID=B1R0S2_CLOBU
Rubrerythrin {ECO:0000313|EMBL:KJZ84065.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
rubrerythrin
L2_031_000G1_scaffold_58_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18268..18588)
DNA (321bp) protein (107aa)
Quaternary ammonium compound-resistance protein QacE n=2 Tax=Clostridium butyricum RepID=M8JDZ3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ32335.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
sugE; SugE protein
L2_031_000G1_scaffold_58_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18969..19169)
DNA (201bp) protein (67aa)
Conserved domain protein n=4 Tax=Clostridium butyricum RepID=B1R0S5_CLOBU
Small, acid-soluble spore protein C1 {ECO:0000313|EMBL:ENZ32334.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L2_031_000G1_scaffold_58_26

Not on your lists

comp(19333..21606)
DNA (2274bp) protein (758aa)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A7B6_CLOBU
5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase {ECO:0000313|EMBL:ETJ37919.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase
L2_031_000G1_scaffold_58_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21692..22600)
DNA (909bp) protein (303aa)
Transcriptional regulator, LysR family protein n=2 Tax=Clostridium butyricum RepID=M8K8S1_CLOBU
LysR family transcriptional regulator {ECO:0000313|EMBL:ENZ32332.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
transcriptional regulator, LysR family
L2_031_000G1_scaffold_58_28
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23310..23837
DNA (528bp) protein (176aa)
PAP2 family protein n=4 Tax=Clostridium butyricum RepID=B1R0S7_CLOBU
PAP2 family protein {ECO:0000313|EMBL:KJZ92065.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
phosphoesterase PA-phosphatase related protein
L2_031_000G1_scaffold_58_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23898..24965)
DNA (1068bp) protein (356aa)
UPI0003AA5DB7 related cluster n=1 Tax=unknown RepID=UPI0003AA5DB7
Uncharacterized protein {ECO:0000313|EMBL:ETI88039.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
L2_031_000G1_scaffold_58_30
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25417..25893)
DNA (477bp) protein (159aa)
UPI0003D61646 related cluster n=1 Tax=unknown RepID=UPI0003D61646
PTS system, cellobiose-specific IIB component {ECO:0000313|EMBL:ETI88037.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
Displaying items 1-30 of 103 in total

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