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L2_031_000G1_scaffold_72

Search features with annotation key words

Displaying items 1-30 of 95 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_000G1_scaffold_72_1
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(600..1070)
DNA (471bp) protein (157aa)
SsrA-binding protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QK93_9CLOT
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
smpB; SsrA-binding protein
L2_031_000G1_scaffold_72_2
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1107..3335)
DNA (2229bp) protein (743aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
Ribonuclease R n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F1P8_9CLOT
rnr; ribonuclease R
L2_031_000G1_scaffold_72_3
[Clostridium] cellulolyticum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3636..5459
DNA (1824bp) protein (608aa)
Uncharacterized protein n=1 Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=B8I5D8_CLOCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL76674.1}; TaxID=394503 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 /; H10).;"
L2_031_000G1_scaffold_72_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5557..7581)
DNA (2025bp) protein (675aa)
Putative K(+)-stimulated pyrophosphate-energized sodium pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound sodium-translocating pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; Pyrophosphate-energized inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1)
Putative K(+)-stimulated pyrophosphate-energized sodium pump n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IDY6_CLOBU
L2_031_000G1_scaffold_72_5
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7733..7963)
DNA (231bp) protein (77aa)
Preprotein translocase, SecG subunit n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HCU3_9CLOT
secG; preprotein translocase, SecG subunit
Preprotein translocase, SecG subunit {ECO:0000313|EMBL:AIY83699.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_031_000G1_scaffold_72_6
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8136..9428)
DNA (1293bp) protein (431aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
eno2; enolase Eno (EC:4.2.1.11)
Enolase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BWK9_9CLOT
L2_031_000G1_scaffold_72_7
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9580..10206)
DNA (627bp) protein (209aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum B RepID=B2TPW6_CLOBB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY82104.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
L2_031_000G1_scaffold_72_8
unknown

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10383..10637
DNA (255bp) protein (85aa)

This feature has no annotations

L2_031_000G1_scaffold_72_9
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10780..12024)
DNA (1245bp) protein (415aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
Uncharacterized protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7T970_CLOSG
sensor protein resE
L2_031_000G1_scaffold_72_10
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12024..12710)
DNA (687bp) protein (229aa)
DNA-binding response regulator n=2 Tax=Clostridium botulinum RepID=B1IFA9_CLOBK
two-component response regulator
Two-component response regulator {ECO:0000313|EMBL:CDM70195.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L2_031_000G1_scaffold_72_11
unknown

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12834..13196
DNA (363bp) protein (121aa)

This feature has no annotations

L2_031_000G1_scaffold_72_12
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13296..15824)
DNA (2529bp) protein (843aa)
Putative ABC transporter, permease protein n=1 Tax=Clostridium botulinum (strain Okra / Type B1) RepID=B1IFA7_CLOBK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM70196.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L2_031_000G1_scaffold_72_13
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15836..16501)
DNA (666bp) protein (222aa)
ABC transporter ATP-binding protein n=1 Tax=Clostridium tetani (strain Massachusetts / E88) RepID=Q893J7_CLOTE
putative ABC transporter ATP-binding protein TM_0352
Putative ABC transporter ATP-binding protein TM_0352 {ECO:0000313|EMBL:CDM70197.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L2_031_000G1_scaffold_72_14
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16649..18184)
DNA (1536bp) protein (512aa)
gpmI; phosphoglyceromutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038};; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=2 Tax=Clostridium botulinum B RepID=B2TPW7_CLOBB
L2_031_000G1_scaffold_72_15
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18396..19142)
DNA (747bp) protein (249aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
tpiA; triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=4 Tax=Clostridium chauvoei RepID=S6FP68_9CLOT
L2_031_000G1_scaffold_72_16
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19376..20554)
DNA (1179bp) protein (393aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
pgk; phosphoglycerate kinase Pgk (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Clostridium sp. CAG:265 RepID=R6KME1_9CLOT
L2_031_000G1_scaffold_72_17
Clostridium scatologenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20664..21674)
DNA (1011bp) protein (337aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1548 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium scatologenes.;"
Glyceraldehyde-3-phosphate dehydrogenase, type I n=4 Tax=Clostridium botulinum RepID=B2TPX5_CLOBB
glyceraldehyde-3-phosphate dehydrogenase, type I
L2_031_000G1_scaffold_72_18
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21738..22775)
DNA (1038bp) protein (346aa)
Putative Transcriptional regulator n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EMV6_9CLOT
Putative Transcriptional regulator {ECO:0000313|EMBL:CDG02517.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
transcriptional regulator
L2_031_000G1_scaffold_72_19
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23101..24483)
DNA (1383bp) protein (461aa)
RNA polymerase sigma-54 factor n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H6T4_9CLOT
rpoN; RNA polymerase sigma-54 factor
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:AIY84149.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_031_000G1_scaffold_72_20
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24622..25470)
DNA (849bp) protein (283aa)
DegV family EDD domain-containing protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XSB3_9CLOT
DegV domain-containing protein {ECO:0000313|EMBL:KJU71171.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
EDD, DegV family domain protein
L2_031_000G1_scaffold_72_21
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25491..25952)
DNA (462bp) protein (154aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Clostridium colicanis 209318 RepID=N9Y340_9CLOT
tRNA/rRNA methyltransferase
L2_031_000G1_scaffold_72_22
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26060..27067)
DNA (1008bp) protein (336aa)
Putative Spore photoproduct lyase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EMW1_9CLOT
Putative Spore photoproduct lyase {ECO:0000313|EMBL:CDG02522.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
hypothetical protein
L2_031_000G1_scaffold_72_23
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27099..27971)
DNA (873bp) protein (291aa)
phosphoglycolate phosphatase,-type (EC:3.1.3.18)
Putative Cof-like hydrolase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FBU6_9CLOT
Putative Cof-like hydrolase {ECO:0000313|EMBL:CDG02523.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
L2_031_000G1_scaffold_72_24
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27991..29430)
DNA (1440bp) protein (480aa)
Vancomycin B-type resistance protein VanW n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2UY29_CLOBA
vancomycin B-type resistance protein VanW
Putative peptidoglycan binding domain protein {ECO:0000313|EMBL:AIY83741.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_031_000G1_scaffold_72_25
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29620..30561)
DNA (942bp) protein (314aa)
Glycoside hydrolase, family 25 n=2 Tax=Clostridium RepID=A6LQZ8_CLOB8
glycoside hydrolase
Muramidase {ECO:0000313|EMBL:ETD71033.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
L2_031_000G1_scaffold_72_26
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30628..32127)
DNA (1500bp) protein (500aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LQZ7_CLOB8
integral membrane sensor signal transduction histidine kinase
L2_031_000G1_scaffold_72_27
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32117..32824)
DNA (708bp) protein (236aa)
Putative Regulatory protein VanR n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EMW6_9CLOT
Putative Regulatory protein VanR {ECO:0000313|EMBL:CDG02527.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
regulatory protein VanR
L2_031_000G1_scaffold_72_28
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32947..33552)
DNA (606bp) protein (202aa)
NTP pyrophosphohydrolase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U5H3_9CLOT
NTP pyrophosphohydrolase {ECO:0000313|EMBL:EKQ56222.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
NUDIX hydrolase
L2_031_000G1_scaffold_72_29
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33678..33857
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q341_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY22130.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L2_031_000G1_scaffold_72_30
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33893..34798)
DNA (906bp) protein (302aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
D-alanine--D-alanine ligase family protein (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Clostridium sp. DL-VIII RepID=G7M742_9CLOT
Displaying items 1-30 of 95 in total

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