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L2_031_000G1_scaffold_88

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Displaying items 1-30 of 83 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_000G1_scaffold_88_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..944
DNA (942bp) protein (314aa)
Aspartase {ECO:0000313|EMBL:EQJ58980.1}; EC=4.3.1.1 {ECO:0000313|EMBL:EQJ58980.1};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Aspartate ammonia-lyase n=5 Tax=Firmicutes RepID=H1ASK4_9FIRM
L2_031_000G1_scaffold_88_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1159..2346
DNA (1188bp) protein (396aa)
dacF; serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase n=5 Tax=Firmicutes RepID=E4LZW5_9CLOT
D-alanyl-D-alanine carboxypeptidase family protein {ECO:0000313|EMBL:EQJ58979.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L2_031_000G1_scaffold_88_3
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2424..2585
DNA (162bp) protein (54aa)
Uncharacterized protein n=6 Tax=Firmicutes RepID=E4LZW6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY85499.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L2_031_000G1_scaffold_88_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3372..3956)
DNA (585bp) protein (195aa)
ANTAR domain protein n=5 Tax=Firmicutes RepID=E4LZW7_9CLOT
ANTAR domain protein {ECO:0000313|EMBL:EQJ58977.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
response regulator with putative antiterminator output domain
L2_031_000G1_scaffold_88_5
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3985..5196)
DNA (1212bp) protein (404aa)
Glutamine synthetase, beta-grasp domain protein {ECO:0000313|EMBL:EFR35659.1}; EC=6.3.1.2 {ECO:0000313|EMBL:EFR35659.1};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Glutamine synthetase, beta-grasp domain protein n=5 Tax=Firmicutes RepID=E4LZW8_9CLOT
hypothetical protein
L2_031_000G1_scaffold_88_6
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5215..5937)
DNA (723bp) protein (241aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=E4LZW9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY85502.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
GltB; glutamate synthase domain 3
L2_031_000G1_scaffold_88_7
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6050..7555)
DNA (1506bp) protein (502aa)
4Fe-4S binding domain protein n=5 Tax=Firmicutes RepID=E4LZX0_9CLOT
4Fe-4S binding domain protein {ECO:0000313|EMBL:EFR35824.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
GltB; glutamate synthase domain 2
L2_031_000G1_scaffold_88_8
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7546..8649)
DNA (1104bp) protein (368aa)
Class II glutamine amidotransferase n=5 Tax=Firmicutes RepID=E4LZX1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC85747.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
GltB; glutamate synthase domain 1
L2_031_000G1_scaffold_88_9
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

8953..10287
DNA (1335bp) protein (445aa)
Glutamate dehydrogenase/leucine dehydrogenase (EC:1.4.1.4)
Glutamate dehydrogenase n=5 Tax=Firmicutes RepID=E4LZX2_9CLOT
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L2_031_000G1_scaffold_88_10
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10321..12498
DNA (2178bp) protein (726aa)
Glutamate--ammonia ligase, catalytic domain protein {ECO:0000313|EMBL:EFR35862.1}; EC=6.3.1.2 {ECO:0000313|EMBL:EFR35862.1};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Glutamate--ammonia ligase, catalytic domain protein n=5 Tax=Firmicutes RepID=E4LZX3_9CLOT
hypothetical protein
L2_031_000G1_scaffold_88_11
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12522..14234
DNA (1713bp) protein (571aa)
Ammonium transporter n=4 Tax=Firmicutes RepID=H1ASJ4_9FIRM
Ammonium transporter {ECO:0000313|EMBL:EHO28500.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
amt2; Ammonium transporter
L2_031_000G1_scaffold_88_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14503..16083
DNA (1581bp) protein (527aa)
Asparagine synthase {ECO:0000313|EMBL:EQJ58969.1}; EC=6.3.5.4 {ECO:0000313|EMBL:EQJ58969.1};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
asparagine synthase (EC:6.3.5.4)
Asparagine synthetase n=5 Tax=Firmicutes RepID=E4LZX5_9CLOT
L2_031_000G1_scaffold_88_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16131..17558
DNA (1428bp) protein (476aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase n=5 Tax=Firmicutes RepID=E4LZX6_9CLOT
L2_031_000G1_scaffold_88_14
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18119..18436
DNA (318bp) protein (106aa)
Anti-sigma factor antagonist n=7 Tax=Firmicutes RepID=E4LZX7_9CLOT
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
spoIIAA; stage II sporulation protein AA (antagonist of anti-sigma factor, stand-alone STAS domain)
L2_031_000G1_scaffold_88_15
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18433..18870
DNA (438bp) protein (146aa)
anti-sigma F factor (EC:2.7.11.1)
Anti-sigma F factor n=5 Tax=Firmicutes RepID=E4LZX8_9CLOT
Anti-sigma F factor {ECO:0000313|EMBL:CDC85740.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L2_031_000G1_scaffold_88_16
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18848..19573
DNA (726bp) protein (242aa)
RNA polymerase sigma factor n=7 Tax=Firmicutes RepID=E4LZX9_9CLOT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
sporulation sigma factor SigF
L2_031_000G1_scaffold_88_17
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19721..20374
DNA (654bp) protein (218aa)
Acetyltransferase, GNAT family n=4 Tax=Firmicutes RepID=E4LZY1_9CLOT
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EFR35881.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L2_031_000G1_scaffold_88_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20367..21419
DNA (1053bp) protein (351aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=E4LZY2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQJ58961.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L2_031_000G1_scaffold_88_19
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

21684..22412
DNA (729bp) protein (243aa)
RNA polymerase sigma factor n=5 Tax=Firmicutes RepID=E4LZY4_9CLOT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
sporulation sigma factor SigK
L2_031_000G1_scaffold_88_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22616..23656)
DNA (1041bp) protein (347aa)
M42 glutamyl aminopeptidase n=5 Tax=Firmicutes RepID=E4LZY5_9CLOT
M42 glutamyl aminopeptidase family protein {ECO:0000313|EMBL:EQJ62411.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
peptidase M42 family protein
L2_031_000G1_scaffold_88_21
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(23678..24934)
DNA (1257bp) protein (419aa)
Transporter, major facilitator family protein n=4 Tax=Firmicutes RepID=E4LZY6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO28489.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
major facilitator superfamily protein
L2_031_000G1_scaffold_88_22
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25000..25656)
DNA (657bp) protein (219aa)
Transcriptional regulator, TetR family n=5 Tax=Firmicutes RepID=E4LZY7_9CLOT
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EFR35866.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
TetR family transcriptional regulator
L2_031_000G1_scaffold_88_23
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

25808..26332
DNA (525bp) protein (175aa)
HAD phosphatase, family IIIA n=6 Tax=Firmicutes RepID=E4LZY8_9CLOT
Phosphatidylglycerophosphatase GEP4 {ECO:0000313|EMBL:CDC85732.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
L2_031_000G1_scaffold_88_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26325..27407
DNA (1083bp) protein (361aa)
Ribosome biogenesis GTPase YqeH n=5 Tax=Firmicutes RepID=E4LZY9_9CLOT
Ferrous iron transport B family protein {ECO:0000313|EMBL:EQJ62415.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
GTP-binding protein YqeH
L2_031_000G1_scaffold_88_25
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

27407..27691
DNA (285bp) protein (95aa)
RNA-binding protein, YhbY family n=7 Tax=Firmicutes RepID=E4LZZ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY85521.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
hypothetical protein
L2_031_000G1_scaffold_88_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27695..28723
DNA (1029bp) protein (343aa)
Nicotinate-nucleotide adenylyltransferase {ECO:0000256|SAAS:SAAS00086517}; EC=2.7.7.18 {ECO:0000256|SAAS:SAAS00086517};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Nicotinate-nucleotide adenylyltransferase n=5 Tax=Firmicutes RepID=E4LZZ1_9CLOT
nadD; nicotinate-nucleotide adenylyltransferase
L2_031_000G1_scaffold_88_27
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28740..29078
DNA (339bp) protein (113aa)
Ribosomal silencing factor RsfS n=5 Tax=Firmicutes RepID=E4LZZ2_9CLOT
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Iojap-like protein
L2_031_000G1_scaffold_88_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29075..29788
DNA (714bp) protein (238aa)
Methyltransferase domain protein n=5 Tax=Firmicutes RepID=E4LZZ3_9CLOT
Methyltransferase domain protein {ECO:0000313|EMBL:EQJ62419.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
methyltransferase
L2_031_000G1_scaffold_88_29
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29785..30465
DNA (681bp) protein (227aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00035231}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00035261}; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00035188}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
mtnN; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase (EC:3.2.2.9)
MTA/SAH nucleosidase n=5 Tax=Firmicutes RepID=E4LZZ4_9CLOT
L2_031_000G1_scaffold_88_30
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

30646..31104
DNA (459bp) protein (153aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LZZ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC85725.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
Displaying items 1-30 of 83 in total

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