ggKbase home page

L2_031_000G1_scaffold_184

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_000G1_scaffold_184_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

484..1272
DNA (789bp) protein (263aa)
Electron transfer flavoprotein, beta subunit n=3 Tax=Clostridium butyricum RepID=B1R053_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30374.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
electron transfer flavoprotein, alpha/beta-subunit-like protein
L2_031_000G1_scaffold_184_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1321..2511
DNA (1191bp) protein (397aa)
Electron transfer flavoprotein, alpha subunit n=3 Tax=Clostridium butyricum RepID=B1R054_CLOBU
Electron transfer flavoprotein, alpha subunit {ECO:0000313|EMBL:KJZ83379.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
etfA2; electron transfer flavoprotein subunit alpha
L2_031_000G1_scaffold_184_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2516..3925
DNA (1410bp) protein (470aa)
Glycolate dehydrogenase {ECO:0000313|EMBL:KJZ83376.1}; EC=1.1.99.14 {ECO:0000313|EMBL:KJZ83376.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Glycolate oxidase, subunit GlcD n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YRY9_CLOBU
glcD1; glycolate oxidase subunit GlcD
L2_031_000G1_scaffold_184_4
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4131..5420
DNA (1290bp) protein (430aa)
SEC-C motif domain protein n=2 Tax=Clostridium butyricum RepID=B1R056_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ90906.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
SEC-C motif domain protein
L2_031_000G1_scaffold_184_5
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5589..6530
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A1L0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ90915.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
putative deacylase
L2_031_000G1_scaffold_184_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6523..7458
DNA (936bp) protein (312aa)
Succinylglutamate desuccinylase/aspartoacylase family protein n=2 Tax=Clostridium butyricum RepID=C4IEP9_CLOBU
Succinylglutamate desuccinylase {ECO:0000313|EMBL:KHD14289.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
succinylglutamate desuccinylase/aspartoacylase
L2_031_000G1_scaffold_184_7
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7690..8370
DNA (681bp) protein (227aa)
Ribosomal small subunit pseudouridine synthase A {ECO:0000313|EMBL:KJZ97302.1}; EC=4.2.1.70 {ECO:0000313|EMBL:KJZ97302.1};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
Alkaline phosphatase synthesis transcriptional regulatory proteinphoP n=2 Tax=Clostridium butyricum RepID=B1R059_CLOBU
walR1; transcriptional regulatory protein WalR
L2_031_000G1_scaffold_184_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8403..9839
DNA (1437bp) protein (479aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
yclK2; sensor histidine kinase YclK (EC:2.7.13.3)
Two-component sensor histidine kinase n=2 Tax=Clostridium butyricum RepID=B1R060_CLOBU
L2_031_000G1_scaffold_184_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9922..10758
DNA (837bp) protein (279aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1R061_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP55468.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L2_031_000G1_scaffold_184_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10788..11834
DNA (1047bp) protein (349aa)
ABC transporter substrate-binding protein n=2 Tax=Clostridium butyricum RepID=B1R062_CLOBU
ABC transporter substrate-binding protein {ECO:0000313|EMBL:EEP55111.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
ABC transporter substrate-binding protein
L2_031_000G1_scaffold_184_11
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11912..13330
DNA (1419bp) protein (473aa)
Hexose phosphate transport protein n=2 Tax=Clostridium butyricum RepID=B1R063_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ97282.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
uhpT; hexose phosphate transport protein UhpT
L2_031_000G1_scaffold_184_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13517..13783
DNA (267bp) protein (89aa)
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K226_CLOBU
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase {ECO:0000313|EMBL:ENZ30380.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
mannose-1-phosphate guanylyltransferase
L2_031_000G1_scaffold_184_13
unknown

Not on your lists

13948..14064
DNA (117bp) protein (39aa)

This feature has no annotations

L2_031_000G1_scaffold_184_14
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14245..17427
DNA (3183bp) protein (1061aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NBB9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF09871.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
DEAD/DEAH box helicase-like protein
L2_031_000G1_scaffold_184_15
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17427..18161
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KH37_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGL00967.1}; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum gibsoniae DSM 7213.;"
L2_031_000G1_scaffold_184_16
Thermosediminibacter oceani, Thermosediminibacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

18158..20278
DNA (2121bp) protein (707aa)
adenine-specific DNA-methyltransferase (EC:2.1.1.72)
Site-specific DNA-methyltransferase (Adenine-specific) {ECO:0000313|EMBL:ADL08674.1}; EC=2.1.1.72 {ECO:0000313|EMBL:ADL08674.1};; TaxID=555079 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermosediminibacter.;" source="Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 /; JW/IW-1228P).;"
Site-specific DNA-methyltransferase (Adenine-specific) n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RZP7_THEOJ
L2_031_000G1_scaffold_184_17
Dehalobacter sp. CF, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20293..23370
DNA (3078bp) protein (1026aa)
Type III site-specific deoxyribonuclease id=2127709 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal
Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal {ECO:0000313|EMBL:AFV04057.1}; TaxID=1131462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter sp. CF.;"
L2_031_000G1_scaffold_184_18
unknown

Not on your lists

comp(24196..25299)
DNA (1104bp) protein (368aa)
Putative membrane protein n=1 Tax=Clostridium thermocellum BC1 RepID=U4MQ89_CLOTM
L2_031_000G1_scaffold_184_19
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25528..25710
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MH48_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF54246.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_031_000G1_scaffold_184_20
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25703..27259
DNA (1557bp) protein (519aa)
Site-specific recombinase, DNA invertase Pin n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TJU6_9CLOT
Site-specific recombinase, DNA invertase Pin {ECO:0000313|EMBL:EKQ51800.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
pin; site-specific recombinase, DNA invertase Pin
L2_031_000G1_scaffold_184_21
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27327..28112
DNA (786bp) protein (262aa)
manC; mannose-1-phosphate guanylyltransferase ManC (EC:2.7.7.13)
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K226_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83385.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
L2_031_000G1_scaffold_184_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28172..28897)
DNA (726bp) protein (242aa)
Transcriptional regulator, GntR family n=2 Tax=Clostridium butyricum RepID=B1R065_CLOBU
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EEP55430.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
GntR family transcriptional regulator
L2_031_000G1_scaffold_184_23
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29299..30474
DNA (1176bp) protein (392aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AE16_CLOBU
N-acetylglucosamine-6-phosphate deacetylase
L2_031_000G1_scaffold_184_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30542..33301
DNA (2760bp) protein (920aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A1L3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30383.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NtrC family Transcriptional regulator, ATPase domain
L2_031_000G1_scaffold_184_25
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33498..33803
DNA (306bp) protein (102aa)
PTS system, cellobiose-specific IIB component {ECO:0000313|EMBL:KJZ83403.1}; EC=2.7.1.69 {ECO:0000313|EMBL:KJZ83403.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Lichenan-specific phosphotransferase enzyme iib component n=2 Tax=Clostridium butyricum RepID=B1R068_CLOBU
phosphotransferase system, lactose/cellobiose-specific IIB subunit
L2_031_000G1_scaffold_184_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33856..34155
DNA (300bp) protein (100aa)
Lichenan-specific phosphotransferase enzyme iia component {ECO:0000313|EMBL:EEP55601.1}; EC=2.7.1.- {ECO:0000313|EMBL:EEP55601.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
Lichenan-specific phosphotransferase enzyme iia component n=3 Tax=Clostridium butyricum RepID=B1R069_CLOBU
PTS system lactose/cellobiose-specific transporter subunit IIA
L2_031_000G1_scaffold_184_27
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34188..35096
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YRZ9_CLOBU
N-acetylglucosamine kinase-like protein {ECO:0000313|EMBL:KJZ90922.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
BadF/BadG/BcrA/BcrD type ATPase
L2_031_000G1_scaffold_184_28
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35098..36186
DNA (1089bp) protein (363aa)
Outer surface protein n=3 Tax=Clostridium butyricum RepID=B1R071_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83389.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
outer surface protein
L2_031_000G1_scaffold_184_29
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36222..37493
DNA (1272bp) protein (424aa)
Lichenan permease iic component n=2 Tax=Clostridium butyricum RepID=B1R072_CLOBU
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
PTS system lactose/cellobiose family transporter subunit IIC
L2_031_000G1_scaffold_184_30
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37847..38455
DNA (609bp) protein (203aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1R073_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30389.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
Displaying items 1-30 of 51 in total

View Taxonomy