ggKbase home page

L2_031_000G1_scaffold_223

Search features with annotation key words

Displaying items 1-30 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_000G1_scaffold_223_1
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(285..551)
DNA (267bp) protein (89aa)
HPr family phosphocarrier n=16 Tax=Clostridium RepID=N9WU27_9CLOT
HPr family phosphocarrier {ECO:0000313|EMBL:ENZ08920.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
PTS system phosphocarrier protein HPr
L2_031_000G1_scaffold_223_2
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(725..1351)
DNA (627bp) protein (209aa)
Uncharacterized protein n=6 Tax=Clostridium clostridioforme RepID=N9X5Q9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ60929.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L2_031_000G1_scaffold_223_3
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1507..2652)
DNA (1146bp) protein (382aa)
RNA polymerase sigma factor SigA n=9 Tax=Clostridium RepID=G5I3K4_9CLOT
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
RpoD subfamily RNA polymerase sigma-70 subunit
L2_031_000G1_scaffold_223_4
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2753..3679)
DNA (927bp) protein (309aa)
YegS//BmrU family lipid kinase n=9 Tax=Clostridium RepID=N9VKP7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF25063.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
diacylglycerol kinase catalytic subunit
L2_031_000G1_scaffold_223_5
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3720..4838)
DNA (1119bp) protein (373aa)
A/G-specific adenine glycosylase (EC:3.2.2.-)
A/G-specific adenine glycosylase n=9 Tax=Clostridium RepID=N9WNJ1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF25064.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
L2_031_000G1_scaffold_223_6
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4825..5805)
DNA (981bp) protein (327aa)
birA, biotin-[acetyl-CoA-carboxylase] ligase region (EC:6.3.4.15)
Biotin-[acetyl-CoA-carboxylase] ligase n=9 Tax=Clostridium RepID=N9WU24_9CLOT
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
L2_031_000G1_scaffold_223_7
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5817..6119)
DNA (303bp) protein (101aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9X0T7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF25066.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
hypothetical protein
L2_031_000G1_scaffold_223_8
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6123..7115)
DNA (993bp) protein (331aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase n=9 Tax=Clostridium RepID=G5I3K9_9CLOT
L2_031_000G1_scaffold_223_9
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7244..8476)
DNA (1233bp) protein (411aa)
NTE family protein n=6 Tax=Clostridium clostridioforme RepID=N9VKP3_9CLOT
NTE family protein {ECO:0000313|EMBL:ENZ60922.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
patatin
L2_031_000G1_scaffold_223_10
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8463..8705)
DNA (243bp) protein (81aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9WNJ6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ60921.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Membrane protein implicated in regulation of membrane protease activity
L2_031_000G1_scaffold_223_11
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8796..9593)
DNA (798bp) protein (266aa)
TrmH family RNA methyltransferase n=9 Tax=Clostridium RepID=N9WU19_9CLOT
TrmH family RNA methyltransferase {ECO:0000313|EMBL:ENZ60920.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
rRNA methylases
L2_031_000G1_scaffold_223_12
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9618..11597)
DNA (1980bp) protein (660aa)
NAD+ synthetase n=9 Tax=Clostridium RepID=N9X0U1_9CLOT
NAD+ synthetase {ECO:0000313|EMBL:ENZ60919.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
NAD+ synthetase
L2_031_000G1_scaffold_223_13
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11797..12537
DNA (741bp) protein (247aa)
Thiamin-thiazole moiety synthesis protein ThiF n=9 Tax=Clostridium RepID=N9VK20_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF25072.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1
L2_031_000G1_scaffold_223_14
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12609..13508)
DNA (900bp) protein (300aa)
Uncharacterized protein n=10 Tax=Clostridium RepID=N9VKN8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ08933.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L2_031_000G1_scaffold_223_15
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13539..13973)
DNA (435bp) protein (145aa)
Rrf2 family protein n=10 Tax=Clostridium RepID=N9WNK0_9CLOT
Rrf2 family protein {ECO:0000313|EMBL:ENZ08934.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
transcriptional regulator, BadM/Rrf2 family
L2_031_000G1_scaffold_223_16
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14195..14587
DNA (393bp) protein (131aa)
Desulfoferrodoxin n=9 Tax=Clostridium RepID=N9WU13_9CLOT
Desulfoferrodoxin {ECO:0000313|EMBL:ENZ08935.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
desulfoferrodoxin ferrous iron-binding region
L2_031_000G1_scaffold_223_17
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14820..16229
DNA (1410bp) protein (470aa)
Stage V sporulation protein AF n=9 Tax=Clostridium RepID=N9X0U6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF25076.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
Bacillus/Clostridium GerA spore germination protein.
L2_031_000G1_scaffold_223_18
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16435..18102)
DNA (1668bp) protein (556aa)
Uncharacterized protein n=6 Tax=Clostridium clostridioforme RepID=N9VK15_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ60913.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
oppA; oligopeptide transporter subunit ; periplasmic-binding component of ABC superfamily
L2_031_000G1_scaffold_223_19
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18099..18383)
DNA (285bp) protein (95aa)
Uncharacterized protein n=6 Tax=Clostridium clostridioforme RepID=N9WP71_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ60912.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
L2_031_000G1_scaffold_223_20
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18498..18599)
DNA (102bp) protein (34aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9YKY5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF25079.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
L2_031_000G1_scaffold_223_21
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18847..19566
DNA (720bp) protein (240aa)
Branched-chain amino acid transporter permease AzlC (Azaleucine resistance) n=9 Tax=Clostridium RepID=N9X1A4_9CLOT
Branched-chain amino acid transporter permease AzlC (Azaleucine resistance) {ECO:0000313|EMBL:ENZ60910.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
AzlC family protein
L2_031_000G1_scaffold_223_22
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19556..19861
DNA (306bp) protein (102aa)
Branched-chain amino acid transporter permease AzlD n=9 Tax=Clostridium RepID=N9WU06_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF25081.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
branched-chain amino acid transporter
L2_031_000G1_scaffold_223_23
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19889..21187)
DNA (1299bp) protein (433aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9X5N5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF25082.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
Protein of unknown function (DUF1576).
L2_031_000G1_scaffold_223_24
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21411..21830)
DNA (420bp) protein (140aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9VK10_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF25083.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
hypothetical protein
L2_031_000G1_scaffold_223_25
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21866..23812)
DNA (1947bp) protein (649aa)
OPT family oligopeptide transporter n=6 Tax=Clostridium clostridioforme RepID=N9VKM7_9CLOT
OPT family oligopeptide transporter {ECO:0000313|EMBL:ENZ60906.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L2_031_000G1_scaffold_223_26
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24392..26350)
DNA (1959bp) protein (653aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=9 Tax=Clostridium RepID=N9X1A7_9CLOT
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:ENZ60905.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
diguanylate cyclase
L2_031_000G1_scaffold_223_27
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26328..27767)
DNA (1440bp) protein (480aa)
prx; peroxiredoxin precursor (EC:1.11.1.15)
Uncharacterized protein n=6 Tax=Clostridium clostridioforme RepID=N9WU02_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ60904.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
L2_031_000G1_scaffold_223_28
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27936..28142)
DNA (207bp) protein (69aa)
Uncharacterized protein n=18 Tax=Clostridium RepID=A8S1M1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB61576.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
hypothetical protein
L2_031_000G1_scaffold_223_29
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28259..31075)
DNA (2817bp) protein (939aa)
Small GTP-binding protein domain protein n=8 Tax=Clostridium RepID=N9VK06_9CLOT
Small GTP-binding protein domain protein {ECO:0000313|EMBL:ENZ60902.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
small GTP-binding protein domain-containing protein
L2_031_000G1_scaffold_223_30
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31069..33081)
DNA (2013bp) protein (671aa)
Molybdopterin oxidoreductase n=9 Tax=Clostridium RepID=N9VKM4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF25089.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
molybdopterin oxidoreductase
Displaying items 1-30 of 81 in total

View Taxonomy