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L2_031_000G1_scaffold_236

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_000G1_scaffold_236_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..346
DNA (345bp) protein (115aa)
Putative conjugative transposon protein Tn916-like, CTn1-Orf20 n=1 Tax=Clostridium difficile E19 RepID=U3YJX3_CLODI
Putative conjugative transposon protein Tn916-like, CTn1-Orf20 {ECO:0000313|EMBL:CCL32110.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
conjugative transposon membrane protein
L2_031_000G1_scaffold_236_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

333..2783
DNA (2451bp) protein (817aa)
AAA-like domain protein n=1 Tax=Clostridium difficile P38 RepID=T4Q3Q8_CLODI
AAA-like domain protein {ECO:0000313|EMBL:EQJ63708.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L2_031_000G1_scaffold_236_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2783..4924
DNA (2142bp) protein (714aa)
Putative membrane protein n=1 Tax=Clostridium difficile P38 RepID=T4Q3X6_CLODI
Conjugative transposon protein {ECO:0000313|EMBL:CBE07574.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
conjugative transposon protein
L2_031_000G1_scaffold_236_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4921..5925
DNA (1005bp) protein (335aa)
Lysozyme-like family protein n=1 Tax=Clostridium difficile P38 RepID=T4Q4W8_CLODI
cell wall hydrolase
Putative cell wall hydrolase {ECO:0000313|EMBL:CBE07576.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L2_031_000G1_scaffold_236_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5941..6834
DNA (894bp) protein (298aa)
Conjugative transposon TcpC family protein n=1 Tax=Clostridium difficile P38 RepID=T4Q3U4_CLODI
conjugative transposon protein
Conjugative transposon protein {ECO:0000313|EMBL:CBE07578.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L2_031_000G1_scaffold_236_6
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6852..7442)
DNA (591bp) protein (197aa)
Transcriptional regulator n=1 Tax=Clostridium sp. CAG:169 RepID=R6C8M0_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:CDA61697.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
transcriptional regulator
L2_031_000G1_scaffold_236_7
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7679..8293
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BK76_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM61943.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hypothetical protein
L2_031_000G1_scaffold_236_8
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

8283..8615
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Allobaculum stercoricanis RepID=UPI0003619C74
Uncharacterized protein {ECO:0000313|EMBL:CDD31357.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
L2_031_000G1_scaffold_236_9
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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8596..10662
DNA (2067bp) protein (689aa)
Uncharacterized protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6L925_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EET62764.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
hypothetical protein
L2_031_000G1_scaffold_236_10
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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10649..12619
DNA (1971bp) protein (657aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YBP8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD31355.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
hypothetical protein
L2_031_000G1_scaffold_236_11
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12650..13054
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Clostridium difficile T10 RepID=U4CQ82_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EOK56874.1}; TaxID=1151191 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis EnGen0063.;"
hypothetical protein
L2_031_000G1_scaffold_236_12
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13093..13461)
DNA (369bp) protein (123aa)
DNA-binding helix-turn-helix protein n=2 Tax=Firmicutes RepID=B6FVF3_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEA79995.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Transcriptional regulator, HTH-type
L2_031_000G1_scaffold_236_13
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13618..13842
DNA (225bp) protein (75aa)
Uncharacterized protein n=2 Tax=Enterococcus faecium RepID=D0AFB1_ENTFC
Uncharacterized protein {ECO:0000313|EMBL:EFD09699.1}; TaxID=565665 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium D344SRF.;"
hypothetical protein
L2_031_000G1_scaffold_236_14
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13861..14226
DNA (366bp) protein (122aa)
Uncharacterized protein n=3 Tax=Enterococcus faecium RepID=D0AFB0_ENTFC
Uncharacterized protein {ECO:0000313|EMBL:EEW65926.1}; TaxID=565666 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium TC 6.;"
hypothetical protein
L2_031_000G1_scaffold_236_15
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14771..15190
DNA (420bp) protein (140aa)
Sigma-70, region 4 n=12 Tax=Clostridiales RepID=E4LUI2_9CLOT
Sigma-70, region 4 {ECO:0000313|EMBL:EFR37544.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
L2_031_000G1_scaffold_236_16
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15190..15420
DNA (231bp) protein (77aa)
Uncharacterized protein n=11 Tax=Clostridiales RepID=E4LUI1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR37554.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
hypothetical protein
L2_031_000G1_scaffold_236_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15886..16086
DNA (201bp) protein (67aa)
DNA binding , excisionase family domain protein n=1 Tax=Clostridium difficile DA00305 RepID=T3Y2A5_CLODI
DNA binding domain, excisionase family {ECO:0000313|EMBL:EFH07104.1}; TaxID=525259 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile NAP08.;"
DNA binding domain, excisionase family
L2_031_000G1_scaffold_236_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16106..17548
DNA (1443bp) protein (481aa)
Site-specific recombinase, phage integrase family n=13 Tax=Firmicutes RepID=D5Q4P7_CLODI
Phage integrase family.
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EFH07103.1}; TaxID=525259 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile NAP08.;"
L2_031_000G1_scaffold_236_19
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18053..18232
DNA (180bp) protein (60aa)
Excisionase family DNA binding domain-containing protein n=1 Tax=Dorea sp. 5-2 RepID=R9MPK2_9FIRM
Excisionase family DNA binding domain-containing protein {ECO:0000313|EMBL:EOS72990.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
excisionase family DNA binding domain-containing protein
L2_031_000G1_scaffold_236_20
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18314..18835
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2DHM4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI80982.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L2_031_000G1_scaffold_236_21
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18998..19888
DNA (891bp) protein (297aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium sp. MSTE9 RepID=J0N0K0_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EJF40199.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein
L2_031_000G1_scaffold_236_22
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19892..20368
DNA (477bp) protein (159aa)
PF12687 family protein n=1 Tax=Clostridium sp. MSTE9 RepID=J0WUK0_9CLOT
PF12687 family protein {ECO:0000313|EMBL:EJF40036.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein
L2_031_000G1_scaffold_236_23
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20365..22161
DNA (1797bp) protein (599aa)
Type IV secretory system Conjugative DNA transfer n=1 Tax=Clostridium sp. MSTE9 RepID=J1H3T5_9CLOT
Type IV secretory system Conjugative DNA transfer {ECO:0000313|EMBL:EJF39903.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
Type IV secretory pathway, VirD4 components
L2_031_000G1_scaffold_236_24
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22181..22396
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PQG6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK45994.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L2_031_000G1_scaffold_236_25
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22411..23280
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PTP8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERK47149.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
L2_031_000G1_scaffold_236_26
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23644..26040
DNA (2397bp) protein (799aa)
AAA-like domain protein n=1 Tax=Clostridium sp. MSTE9 RepID=J0N6S6_9CLOT
AAA-like domain protein {ECO:0000313|EMBL:EJF40147.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hydrolase
L2_031_000G1_scaffold_236_27
Johnsonella ignava, Johnsonella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26037..27062
DNA (1026bp) protein (342aa)
Site-specific DNA methylase (EC:2.1.1.37)
Putative uncharacterized protein n=1 Tax=Johnsonella ignava ATCC 51276 RepID=G5GK95_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHI54835.1}; TaxID=679200 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Johnsonella.;" source="Johnsonella ignava ATCC 51276.;"
L2_031_000G1_scaffold_236_28
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27049..28947
DNA (1899bp) protein (633aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=C0FRF8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG94811.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L2_031_000G1_scaffold_236_29
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28971..29225
DNA (255bp) protein (85aa)
PF14193 domain protein n=1 Tax=Clostridium sp. MSTE9 RepID=J0N5Q7_9CLOT
PF14193 domain protein {ECO:0000313|EMBL:EJF39802.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein
L2_031_000G1_scaffold_236_30
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29215..29931
DNA (717bp) protein (239aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HF88_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE99935.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
hypothetical protein
Displaying items 1-30 of 56 in total

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