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L2_031_000G1_scaffold_241

Search features with annotation key words

Displaying items 1-30 of 353 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_000G1_scaffold_241_1
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..380)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9JHS9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS33668.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
hypothetical protein
L2_031_000G1_scaffold_241_2
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(422..643)
DNA (222bp) protein (74aa)
Uncharacterized protein n=38 Tax=Bacteria RepID=H1LZ82_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETD20426.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L2_031_000G1_scaffold_241_3
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(667..1650)
DNA (984bp) protein (328aa)
Uncharacterized protein n=15 Tax=Firmicutes RepID=A8SX55_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ENZ14013.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
L2_031_000G1_scaffold_241_4
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1987..3459
DNA (1473bp) protein (491aa)
Site-specific recombinases, DNA invertase Pin homologs n=24 Tax=root RepID=D4L0X6_9FIRM
Site-specific recombinases, DNA invertase Pin homologs
TnpX site-specific recombinase {ECO:0000313|EMBL:EEX20396.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
L2_031_000G1_scaffold_241_5
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3548..5230
DNA (1683bp) protein (561aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
DNA topoisomerase III, bacteria and conjugative plasmid (EC:5.99.1.2)
DNA topoisomerase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGQ5_9FIRM
L2_031_000G1_scaffold_241_6
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

5230..6099
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1AL91_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ46296.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
hypothetical protein
L2_031_000G1_scaffold_241_7
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6104..6412
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9N3V5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS77713.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
hypothetical protein
L2_031_000G1_scaffold_241_8
Clostridium sp. CAG:590, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6393..6995
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:590 RepID=R5EE51_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX87042.1}; TaxID=1262825 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:590.;"
hypothetical protein
L2_031_000G1_scaffold_241_9
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6995..7201
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90A9 RepID=R0BV82_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ48769.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
hypothetical protein
L2_031_000G1_scaffold_241_10
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

7219..15582
DNA (8364bp) protein (2788aa)
Helicase C-terminal domain protein n=20 Tax=root RepID=E8LH25_9FIRM
Helicase C-terminal domain protein {ECO:0000313|EMBL:EFY03900.1}; TaxID=626939 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens YIT 12067.;"
SNF2-like protein
L2_031_000G1_scaffold_241_11
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15582..15914
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W123_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ38660.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
Bacterial mobilisation protein (MobC).
L2_031_000G1_scaffold_241_12
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16029..16313
DNA (285bp) protein (95aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GRR9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL40494.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L2_031_000G1_scaffold_241_13
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16384..17778
DNA (1395bp) protein (465aa)
Uncharacterized protein n=2 Tax=root RepID=R8W1R8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ38664.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
Relaxase/Mobilisation nuclease domain.
L2_031_000G1_scaffold_241_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17858..18898)
DNA (1041bp) protein (347aa)
Arsenical-resistance protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SDF6_9FIRM
Arsenical-resistance protein {ECO:0000313|EMBL:EDP20881.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
arsB2; arsenite efflux pump protein
L2_031_000G1_scaffold_241_15
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18989..19381)
DNA (393bp) protein (131aa)
Protein tyrosine phosphatase n=3 Tax=Bacillaceae RepID=G2TMW2_BACCO
protein tyrosine phosphatase
Protein tyrosine phosphatase {ECO:0000313|EMBL:CDZ24616.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
L2_031_000G1_scaffold_241_16
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19383..19793)
DNA (411bp) protein (137aa)
Redox-active disulfide protein 2 n=1 Tax=Clostridium sp. ASF502 RepID=N2AF93_9CLOT
Redox-active disulfide protein 2 {ECO:0000313|EMBL:EMZ23059.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
hypothetical protein
L2_031_000G1_scaffold_241_17
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19818..20510)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1BBE3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO26684.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
hypothetical protein
L2_031_000G1_scaffold_241_18
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20512..21081)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2A4D9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ23061.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
Thioredoxin
L2_031_000G1_scaffold_241_19
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21087..21881)
DNA (795bp) protein (265aa)
Putative uncharacterized protein n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6UA47_ETHHY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU27408.1}; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033; / YUAN-3).;"
L2_031_000G1_scaffold_241_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21895..22911)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZH06_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD76053.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
permease
L2_031_000G1_scaffold_241_21
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23538..24038)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGP5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45534.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_031_000G1_scaffold_241_22
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24066..24599)
DNA (534bp) protein (178aa)
Uncharacterized protein n=3 Tax=Clostridium clostridioforme RepID=N9YC56_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ65549.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
L2_031_000G1_scaffold_241_23
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(24596..25096)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1ALA9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ46314.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
hypothetical protein
L2_031_000G1_scaffold_241_24
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25261..25581
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGP3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45532.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Helix-turn-helix.
L2_031_000G1_scaffold_241_25
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26029..26280
DNA (252bp) protein (84aa)
Predicted transcriptional regulator n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DI08_CLOSC
Predicted transcriptional regulator
Predicted transcriptional regulator {ECO:0000313|EMBL:CBK77332.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L2_031_000G1_scaffold_241_26
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26373..27944
DNA (1572bp) protein (524aa)
Type I restriction-modification system methyltransferase subunit (EC:2.1.1.72)
Putative type I restriction-modification system, M subunit n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZTG8_9FIRM
Putative type I restriction-modification system, M subunit {ECO:0000313|EMBL:EDM87123.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
L2_031_000G1_scaffold_241_27
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27928..29073
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9YHV1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ07392.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
Restriction endonuclease S subunits
L2_031_000G1_scaffold_241_28
Shewanella putrefaciens, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29104..29394
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) RepID=A4Y4V7_SHEPC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABP74990.1}; TaxID=319224 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella putrefaciens (strain CN-32 / ATCC BAA-453).;"
L2_031_000G1_scaffold_241_29
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29485..30468
DNA (984bp) protein (328aa)
Uncharacterized protein n=2 Tax=root RepID=N9Y634_9CLOT
Site-specific recombinase XerD
Uncharacterized protein {ECO:0000313|EMBL:ENZ07393.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
L2_031_000G1_scaffold_241_30
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30478..30993
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9YGL7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ07394.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
Displaying items 1-30 of 353 in total

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