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L2_031_000G1_scaffold_242

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_000G1_scaffold_242_1
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..168)
DNA (168bp) protein (56aa)
PTS system, lactose/cellobiose family IIC component n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H6K2_9CLOT
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
phosphotransferase system
L2_031_000G1_scaffold_242_2
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(648..800)
DNA (153bp) protein (51aa)
Conserved domain protein n=4 Tax=Clostridium botulinum RepID=B2TJT9_CLOBB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM67552.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L2_031_000G1_scaffold_242_3
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(998..1816)
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H7C0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97841.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L2_031_000G1_scaffold_242_4
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

2025..3092
DNA (1068bp) protein (356aa)
AraC family transcriptional regulator (EC:3.2.1.37)
Transcriptional regulator, AraC family n=5 Tax=Firmicutes RepID=E4LXY4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC85506.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L2_031_000G1_scaffold_242_5
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

3249..5195
DNA (1947bp) protein (649aa)
NADH oxidase n=1 Tax=Blautia producta RepID=UPI00036E365C
NADH oxidase {ECO:0000313|EMBL:KGJ51147.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
NADH:flavin oxidoreductases, Old Yellow Enzyme family
L2_031_000G1_scaffold_242_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5245..5610)
DNA (366bp) protein (122aa)
Transcriptional regulator, ArsR family n=8 Tax=Clostridium difficile RepID=U3VMR0_CLODI
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:EHJ32507.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
ArsR family transcriptional regulator
L2_031_000G1_scaffold_242_7
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5626..6402)
DNA (777bp) protein (259aa)
4Fe-4S binding domain protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0CJS7_CLOSO
Nitroreductase {ECO:0000313|EMBL:CEQ30523.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
nitroreductase
L2_031_000G1_scaffold_242_8
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6571..7317
DNA (747bp) protein (249aa)
4Fe-4S binding domain protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BW46_9CLOT
4Fe-4S binding domain protein {ECO:0000313|EMBL:EEG75885.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
putative polyferredoxin
L2_031_000G1_scaffold_242_9
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7369..8817)
DNA (1449bp) protein (483aa)
TrkH family potassium uptake protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HD06_9CLOT
TrkH family potassium uptake protein {ECO:0000313|EMBL:EEH97164.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
trkH; Trk system potassium uptake protein TrkH
L2_031_000G1_scaffold_242_10
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8823..10178)
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HFA3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97163.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
trkA; potassium transporter peripheral membrane component
L2_031_000G1_scaffold_242_11
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10716..12398
DNA (1683bp) protein (561aa)
GH3 auxin-responsive promoter n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QHP3_9CLOT
GH3 auxin-responsive promoter {ECO:0000313|EMBL:EKY27534.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
plant auxin-responsive GH3-like protein
L2_031_000G1_scaffold_242_12
unknown

Not on your lists

comp(12476..14269)
DNA (1794bp) protein (598aa)

This feature has no annotations

L2_031_000G1_scaffold_242_13
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14282..14932)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Clostridium intestinale URNW RepID=U2PYE0_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY85132.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_031_000G1_scaffold_242_14
unknown

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comp(15117..15350)
DNA (234bp) protein (78aa)

This feature has no annotations

L2_031_000G1_scaffold_242_15
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15647..15949)
DNA (303bp) protein (101aa)
Putative transcriptional regulator n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CCU1_9CLOT
Putative transcriptional regulator {ECO:0000313|EMBL:EOR25036.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
L2_031_000G1_scaffold_242_16
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16490..17221)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:257 RepID=R5X190_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA06089.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
hypothetical protein
L2_031_000G1_scaffold_242_17
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17457..17603)
DNA (147bp) protein (49aa)
Putative transcriptional regulator n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CCU1_9CLOT
Putative transcriptional regulator {ECO:0000313|EMBL:EOR25036.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
L2_031_000G1_scaffold_242_18

Not on your lists

comp(17704..18126)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9JFC7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETJ35939.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
DNA-binding domain-containing protein
L2_031_000G1_scaffold_242_19
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18215..19102)
DNA (888bp) protein (296aa)
PHP domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QL36_9CLOT
PHP domain protein {ECO:0000313|EMBL:EKY28415.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
putative metal-dependent phosphoesterase
L2_031_000G1_scaffold_242_20
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19512..19865)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ACX6_CLOBU
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:KJZ86438.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_031_000G1_scaffold_242_21
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19981..21357)
DNA (1377bp) protein (459aa)
Dihydrolipoamide dehydrogenase Mercuric ion reductase {ECO:0000313|EMBL:KJZ86384.1}; EC=1.16.1.1 {ECO:0000313|EMBL:KJZ86384.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
UPI0003D5A04A related cluster n=1 Tax=unknown RepID=UPI0003D5A04A
pyridine nucleotide-disulphide oxidoreductase
L2_031_000G1_scaffold_242_22
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21954..22514)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QKU6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY28603.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
putative transmembrane protein (transporter-like)
L2_031_000G1_scaffold_242_23
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22528..23103)
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Succinispira mobilis RepID=UPI00037312F0
Uncharacterized protein {ECO:0000313|EMBL:KHS58118.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othiniensis.;"
YeeE/YedE family protein
L2_031_000G1_scaffold_242_24
Sphaerochaeta pleomorpha, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

23346..23966
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI00036F37DA
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AEV28694.1}; TaxID=158190 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes).;"
L2_031_000G1_scaffold_242_25
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23980..25263
DNA (1284bp) protein (428aa)
macrolide transporter n=1 Tax=Paenibacillus sp. OSY-SE RepID=UPI0002DE9381
macrolide transporter
Tax=BJP_IG2069_Clostridiales_48_15
L2_031_000G1_scaffold_242_26
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25256..27574
DNA (2319bp) protein (773aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI00036C2D5D
ABC transporter permease
Probable ABC transporter, permease {ECO:0000313|EMBL:AAY60230.1}; TaxID=288681 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus (strain ZK / E33L).;"
L2_031_000G1_scaffold_242_27
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27579..28337
DNA (759bp) protein (253aa)
ABC transporter ATP-binding protein n=1 Tax=Bacillus fordii RepID=UPI0003748C59
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:EMS72640.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
ABC transporter, ATP-binding protein
L2_031_000G1_scaffold_242_28
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28869..29309)
DNA (441bp) protein (147aa)
Bacterial hemoglobin n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QHN4_9CLOT
vhb; Bacterial hemoglobin
Bacterial hemoglobin {ECO:0000313|EMBL:CDM69899.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L2_031_000G1_scaffold_242_29
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29539..29934
DNA (396bp) protein (132aa)
Putative HTH-type transcriptional repressor NsrR n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QIL2_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM69898.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L2_031_000G1_scaffold_242_30
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30144..34748)
DNA (4605bp) protein (1535aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7GR73_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE29551.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
hypothetical protein
Displaying items 1-30 of 51 in total

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