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L2_031_000G1_scaffold_247

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_000G1_scaffold_247_1
unknown

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comp(2..94)
DNA (93bp) protein (31aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9Y604_9CLOT
hypothetical protein
L2_031_000G1_scaffold_247_2
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(112..1611)
DNA (1500bp) protein (500aa)
Glycerol kinase {ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|SAAS:SAAS00029376};; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
Glycerol kinase n=4 Tax=Clostridium difficile RepID=T3SVE4_CLODI
carbohydrate kinase
L2_031_000G1_scaffold_247_3
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1626..2564)
DNA (939bp) protein (313aa)
Transketolase {ECO:0000313|EMBL:AJH02033.1}; EC=2.2.1.1 {ECO:0000313|EMBL:AJH02033.1};; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
transketolase (EC:2.2.1.1)
Transketolase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MVB2_9CLOT
L2_031_000G1_scaffold_247_4
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2577..3395)
DNA (819bp) protein (273aa)
transketolase (EC:2.2.1.1)
Transketolase {ECO:0000313|EMBL:AGF58587.1}; EC=2.2.1.1 {ECO:0000313|EMBL:AGF58587.1};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
Transketolase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1N569_9CLOT
L2_031_000G1_scaffold_247_5
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3551..4555)
DNA (1005bp) protein (335aa)
Periplasmic binding s and sugar binding domain of LacI family protein n=4 Tax=Clostridium difficile RepID=T3SRK4_CLODI
Transcriptional regulator, LacI family {ECO:0000313|EMBL:AJH02029.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
transcriptional regulator, LacI family
L2_031_000G1_scaffold_247_6
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4699..5976)
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MQX7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:AJH02030.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
hypothetical protein DUF4038
L2_031_000G1_scaffold_247_7
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(5980..7395)
DNA (1416bp) protein (472aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GFP3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW03107.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
L-fucose isomerase
L2_031_000G1_scaffold_247_8
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(7482..8774)
DNA (1293bp) protein (431aa)
PTS system protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GFP8_9FIRM
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
PTS system, lactose/cellobiose family IIC component
L2_031_000G1_scaffold_247_9
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9101..9955)
DNA (855bp) protein (285aa)
xynB1; endo-1,4-beta-xylanase B (EC:3.2.1.8)
Endo-1,4-beta-xylanase B n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GFP7_9FIRM
Endo-1,4-beta-xylanase B {ECO:0000313|EMBL:EFW03111.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
L2_031_000G1_scaffold_247_10
Bacillus nealsonii, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(10063..10824)
DNA (762bp) protein (254aa)
RpiR family transcriptional regulator n=1 Tax=Bacillus nealsonii AAU1 RepID=R9BZ25_9BACI
RpiR family transcriptional regulator {ECO:0000313|EMBL:EOR22283.1}; TaxID=1202533 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus nealsonii AAU1.;"
L2_031_000G1_scaffold_247_11
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10877..12355)
DNA (1479bp) protein (493aa)
bglA4; aryl-phospho-beta-D-glucosidase BglA (EC:3.2.1.86)
Glycosyl hydrolase, family 1 n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N3M6_9FIRM
Glycosyl hydrolase, family 1 {ECO:0000313|EMBL:EDS19048.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
L2_031_000G1_scaffold_247_12
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12437..13141)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C704_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR25058.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
L2_031_000G1_scaffold_247_13
Mycoplasma sp. CAG:877, Mycoplasma, Mycoplasmatales, Mollicutes, Tenericutes, Bacteria

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13235..14107
DNA (873bp) protein (291aa)
Lipid kinase YegS/Rv2252/BmrU family n=1 Tax=Mycoplasma sp. CAG:877 RepID=R5LKZ9_9MOLU
Lipid kinase YegS/Rv2252/BmrU family {ECO:0000313|EMBL:CCY79860.1}; TaxID=1262907 species="Bacteria; Tenericutes; Mollicutes; Mycoplasmataceae; Mycoplasma; environmental samples.;" source="Mycoplasma sp. CAG:877.;"
hypothetical protein
L2_031_000G1_scaffold_247_14
unknown

Not on your lists

comp(14357..14497)
DNA (141bp) protein (47aa)

This feature has no annotations

L2_031_000G1_scaffold_247_15
unknown

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comp(14713..15108)
DNA (396bp) protein (132aa)

This feature has no annotations

L2_031_000G1_scaffold_247_16
Paenibacillus pini, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15119..15805)
DNA (687bp) protein (229aa)
bacitracin ABC transporter permease n=1 Tax=Bacillus sp. FJAT-13831 RepID=UPI0002DF80B9
Bacitracin transport permease protein BCRB {ECO:0000313|EMBL:GAF08156.1}; TaxID=1236976 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus pini JCM 16418.;"
hypothetical protein
L2_031_000G1_scaffold_247_17
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15806..16714)
DNA (909bp) protein (303aa)
bacitracin ABC transporter ATP-binding protein n=1 Tax=Bacillus sp. FJAT-13831 RepID=UPI0003074CE5
Bacitracin transport ATP-binding protein bcrA {ECO:0000313|EMBL:EOP65639.1}; TaxID=1085379 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus VDM006.;"
ABC transporter family protein
L2_031_000G1_scaffold_247_18
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16795..17730)
DNA (936bp) protein (312aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1053220 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus MSX-A1.;"
Sensor histidine kinase n=3 Tax=Bacillus cereus group RepID=B7IJT6_BACC2
sensor histidine kinase
L2_031_000G1_scaffold_247_19
Bacillus subtilis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17730..18425)
DNA (696bp) protein (232aa)
Two-component response regulator (YcbM) n=1 Tax=Bacillus subtilis subsp. spizizenii ATCC 6633 RepID=D5N2T7_BACPN
PhoP family transcriptional regulator {ECO:0000313|EMBL:KJJ41622.1}; TaxID=1423 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus subtilis.;"
sensory transduction protein YcbL
L2_031_000G1_scaffold_247_20
Bacillus gaemokensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18917..19801
DNA (885bp) protein (295aa)
epimerase n=1 Tax=Bacillus sp. FJAT-13831 RepID=UPI0003802090
Epimerase {ECO:0000313|EMBL:KEK25613.1}; TaxID=574375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus gaemokensis.;"
hypothetical protein
L2_031_000G1_scaffold_247_21
unknown

Not on your lists

comp(20274..20648)
DNA (375bp) protein (125aa)

This feature has no annotations

L2_031_000G1_scaffold_247_22
unknown

Not on your lists

comp(21032..21571)
DNA (540bp) protein (180aa)

This feature has no annotations

L2_031_000G1_scaffold_247_23
unknown

Not on your lists

21755..22252
DNA (498bp) protein (166aa)

This feature has no annotations

L2_031_000G1_scaffold_247_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22444..23223
DNA (780bp) protein (260aa)
Histidinol phosphatase n=2 Tax=Clostridium perfringens RepID=B1BUM3_CLOPF
Histidinol phosphatase {ECO:0000313|EMBL:EDT14555.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hisB; histidinol phosphatase
L2_031_000G1_scaffold_247_25
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23359..23739)
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI00035CF2FA
hepn domain, putative
Hepn domain, putative {ECO:0000313|EMBL:CDM67696.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L2_031_000G1_scaffold_247_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23757..24113)
DNA (357bp) protein (119aa)
DNA polymerase beta domain protein region n=1 Tax=Clostridium sp. CAG:265 RepID=R6LLT4_9CLOT
DNA polymerase beta {ECO:0000313|EMBL:KHD16350.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hypothetical protein
L2_031_000G1_scaffold_247_27
unknown

Not on your lists

24269..24718
DNA (450bp) protein (150aa)

This feature has no annotations

L2_031_000G1_scaffold_247_28
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24801..26627)
DNA (1827bp) protein (609aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WMB4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ04040.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
glycosyl hydrolase
L2_031_000G1_scaffold_247_29
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26644..27978)
DNA (1335bp) protein (445aa)
MATE efflux family protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CCC1_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:EOR24836.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
yisQ; putative transporter YisQ
L2_031_000G1_scaffold_247_30
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28095..28763
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WJD4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ03015.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
helix-turn-helix domain-containing protein
Displaying items 1-30 of 49 in total

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