ggKbase home page

L2_031_000G1_scaffold_296

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_000G1_scaffold_296_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

109..1140
DNA (1032bp) protein (344aa)
SIS domain protein n=5 Tax=Firmicutes RepID=E4LVU6_9CLOT
SIS domain protein {ECO:0000313|EMBL:EQJ51904.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
glucosamine-fructose-6-phosphate aminotransferase
L2_031_000G1_scaffold_296_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1144..1794
DNA (651bp) protein (217aa)
HAD hydrolase, family IA, variant 3 n=5 Tax=Firmicutes RepID=E4LVU5_9CLOT
HAD hydrolase, IA, variant 1 family protein {ECO:0000313|EMBL:EQJ51905.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Hydrolase, haloacid dehalogenase-like family
L2_031_000G1_scaffold_296_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1791..2636
DNA (846bp) protein (282aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=H1AXJ6_9FIRM
Xylose isomerase-like TIM barrel family protein {ECO:0000313|EMBL:EQJ51906.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Xylose isomerase domain-containing protein TIM barrel
L2_031_000G1_scaffold_296_4
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

2633..3049
DNA (417bp) protein (139aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=H1AXJ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC85295.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
PTS system fructose subfamily IIA component
L2_031_000G1_scaffold_296_5
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

3064..3537
DNA (474bp) protein (158aa)
PTS system sorbose subfamily IIB component n=2 Tax=Firmicutes RepID=E4LVU2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO31804.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
PTS system sorbose subfamily transporter subunit IIB
L2_031_000G1_scaffold_296_6
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

3553..4326
DNA (774bp) protein (258aa)
PTS system sorbose-specific iic component n=4 Tax=Firmicutes RepID=E4LVU1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC85293.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
PTS system sorbose-specific transporter subunit IIC
L2_031_000G1_scaffold_296_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4313..5152
DNA (840bp) protein (280aa)
PTS system mannose/fructose/sorbose family IID component n=5 Tax=Firmicutes RepID=E4LVU0_9CLOT
PTS system mannose/fructose/sorbose IID component family protein {ECO:0000313|EMBL:EQJ51910.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
PTS system mannose/fructose/sorbose family transporter subunit IID
L2_031_000G1_scaffold_296_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5211..5873
DNA (663bp) protein (221aa)
Deoxyribose-phosphate aldolase {ECO:0000256|SAAS:SAAS00058202}; EC=4.1.2.4 {ECO:0000256|SAAS:SAAS00058202};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Deoxyribose-phosphate aldolase n=4 Tax=Firmicutes RepID=H1AXJ1_9FIRM
hypothetical protein
L2_031_000G1_scaffold_296_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5973..7343
DNA (1371bp) protein (457aa)
MATE efflux family protein n=4 Tax=Firmicutes RepID=E4LVT8_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:EQJ51912.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
MATE efflux family protein
L2_031_000G1_scaffold_296_10
unknown

Not on your lists

comp(7694..7906)
DNA (213bp) protein (71aa)

This feature has no annotations

L2_031_000G1_scaffold_296_11
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7952..8059)
DNA (108bp) protein (36aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=H1AXI9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC85289.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L2_031_000G1_scaffold_296_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8056..9573)
DNA (1518bp) protein (506aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=2 Tax=Firmicutes RepID=H1AXI8_9FIRM
Diguanylate cyclase domain protein {ECO:0000313|EMBL:EQJ51913.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Two-component sensor histidine kinase
L2_031_000G1_scaffold_296_13
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9613..10671)
DNA (1059bp) protein (353aa)
PAS domain S-box protein n=3 Tax=Firmicutes RepID=E4LVT6_9CLOT
PAS domain S-box protein {ECO:0000313|EMBL:EFR36981.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
hypothetical protein
L2_031_000G1_scaffold_296_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10924..11571
DNA (648bp) protein (216aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Signal peptidase I n=5 Tax=Firmicutes RepID=E4LVT5_9CLOT
signal peptidase I
L2_031_000G1_scaffold_296_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11568..12005
DNA (438bp) protein (146aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=R6UYS1_9FIRM
Polyketide cyclase / dehydrase and lipid transport family protein {ECO:0000313|EMBL:EQJ51916.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L2_031_000G1_scaffold_296_16
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12039..12323
DNA (285bp) protein (95aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=E4LVT3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY88224.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
hypothetical protein
L2_031_000G1_scaffold_296_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12679..14007
DNA (1329bp) protein (443aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1AXI3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQJ51918.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L2_031_000G1_scaffold_296_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14124..15329
DNA (1206bp) protein (402aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1AXI2_9FIRM
O-Antigen ligase family protein {ECO:0000313|EMBL:EQJ51919.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
putative polysaccharide repeat unit polymerase
L2_031_000G1_scaffold_296_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16013..16750
DNA (738bp) protein (246aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1AXI1_9FIRM
YdjC-like family protein {ECO:0000313|EMBL:EQJ51920.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
cellobiose-phosphate degrading protein
L2_031_000G1_scaffold_296_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16756..19485
DNA (2730bp) protein (910aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1AXI0_9FIRM
AAA domain family protein {ECO:0000313|EMBL:EQJ51921.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
AtoC; ATPase
L2_031_000G1_scaffold_296_21
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19718..20197
DNA (480bp) protein (160aa)
PTS system mannose/fructose/sorbose transporter subunit IIB (EC:2.7.1.69)
PTS system sorbose subfamily IIB component n=7 Tax=Firmicutes RepID=E4LVS8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY88215.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L2_031_000G1_scaffold_296_22
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20211..20990
DNA (780bp) protein (260aa)
PTS system sorbose-specific iic component n=7 Tax=Firmicutes RepID=E4LVS7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY88214.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
PTS system, mannose/fructose/sorbose family, IIC component
L2_031_000G1_scaffold_296_23
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20983..21783
DNA (801bp) protein (267aa)
PTS system mannose/fructose/sorbose transporter subunit IID (EC:2.7.1.69)
PTS system mannose/fructose/sorbose family IID component n=7 Tax=Firmicutes RepID=E4LVS6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY88213.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L2_031_000G1_scaffold_296_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21800..23026
DNA (1227bp) protein (409aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LVS5_9CLOT
Neutral/alkaline non-lysosomal ceramidase family protein {ECO:0000313|EMBL:EQJ51925.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L2_031_000G1_scaffold_296_25
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

23023..23445
DNA (423bp) protein (141aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=G1VVA7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC85276.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
phosphotransferase system, mannose/fructose-specific component IIA
L2_031_000G1_scaffold_296_26
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

23548..24348
DNA (801bp) protein (267aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=G1VVA6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY88210.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L2_031_000G1_scaffold_296_27
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24353..25111
DNA (759bp) protein (253aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=E4LVS2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR37045.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
tyrosine phosphatase family protein
L2_031_000G1_scaffold_296_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25133..25981
DNA (849bp) protein (283aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LVS1_9CLOT
NIF3 family protein {ECO:0000313|EMBL:EQJ51929.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L2_031_000G1_scaffold_296_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26380..27252)
DNA (873bp) protein (291aa)
Transcriptional regulator, AraC family n=5 Tax=Firmicutes RepID=E4LVS0_9CLOT
Cupin domain protein {ECO:0000313|EMBL:EQJ51930.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
AraC family bacterial regulatory protein
L2_031_000G1_scaffold_296_30
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27434..29017
DNA (1584bp) protein (528aa)
Acetate CoA-transferase YdiF {ECO:0000256|PIRNR:PIRNR000858}; EC=2.8.3.8 {ECO:0000256|PIRNR:PIRNR000858};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Acetate CoA-transferase YdiF n=2 Tax=Firmicutes RepID=E4LVR9_9CLOT
acyl CoA:acetate/3-ketoacid CoA transferase
Displaying items 1-30 of 44 in total

View Taxonomy