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L2_031_000G1_scaffold_322

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_000G1_scaffold_322_1
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..562
DNA (561bp) protein (187aa)
Phosphogluconate dehydrogenase (Decarboxylating), NAD binding domain protein n=3 Tax=Firmicutes RepID=E4LV98_9CLOT
Phosphogluconate dehydrogenase (Decarboxylating), NAD binding domain protein {ECO:0000313|EMBL:EFR37313.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
6-phosphogluconate dehydrogenase
L2_031_000G1_scaffold_322_2
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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675..890
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 21_3 RepID=H1B3Y1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC83679.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L2_031_000G1_scaffold_322_3
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(924..1601)
DNA (678bp) protein (226aa)
Transaldolase {ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|SAAS:SAAS00118670};; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
Transaldolase (EC:2.2.1.2 4.1.2.-)
Fructose-6-phosphate aldolase n=3 Tax=Firmicutes RepID=H1B3Y2_9FIRM
L2_031_000G1_scaffold_322_4
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(1624..2568)
DNA (945bp) protein (315aa)
glycyl-radical enzyme activating protein family (EC:1.97.1.4)
Glycyl-radical enzyme activating protein family n=3 Tax=Firmicutes RepID=H1B3Y3_9FIRM
Glycyl-radical enzyme activating protein family {ECO:0000313|EMBL:CDC83682.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L2_031_000G1_scaffold_322_5
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(2531..4876)
DNA (2346bp) protein (782aa)
Pyruvate formate-lyase n=1 Tax=Erysipelotrichaceae bacterium 2_2_44A RepID=G1VVQ1_9FIRM
Pyruvate formate-lyase {ECO:0000313|EMBL:EGX72080.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
pyruvate formate-lyase
L2_031_000G1_scaffold_322_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5008..5775)
DNA (768bp) protein (256aa)
Transcriptional regulator, DeoR family n=5 Tax=Firmicutes RepID=E4LV94_9CLOT
DeoR C terminal sensor domain protein {ECO:0000313|EMBL:EQJ56193.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Transcriptional regulators of sugar metabolism
L2_031_000G1_scaffold_322_7
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6103..6483)
DNA (381bp) protein (127aa)
dfx; desulfoferrodoxin Dfx (EC:1.15.1.2)
Uncharacterized protein n=7 Tax=Firmicutes RepID=G1VVP9_9FIRM
Desulfoferrodoxin {ECO:0000313|EMBL:ENY84277.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L2_031_000G1_scaffold_322_8
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6636..7517
DNA (882bp) protein (294aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Pseudouridine synthase n=4 Tax=Firmicutes RepID=E4LV91_9CLOT
RNA pseudouridine synthase
L2_031_000G1_scaffold_322_9
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7530..8852)
DNA (1323bp) protein (441aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Erysipelotrichaceae bacterium CAG:64 RepID=R6VMN2_9FIRM
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:CDC83692.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
diguanylate cyclase
L2_031_000G1_scaffold_322_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9154..10476
DNA (1323bp) protein (441aa)
Tagatose-6-phosphate kinase n=5 Tax=Firmicutes RepID=E4LV88_9CLOT
D-tagatose-1,6-bisphosphate aldolase subunit kbaZ {ECO:0000313|EMBL:EQJ56199.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
D-tagatose-bisphosphate aldolase class II accessory protein AgaZ
L2_031_000G1_scaffold_322_11
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10841..12148)
DNA (1308bp) protein (436aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=H1B3Z0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC83695.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
patatin family phospholipase
L2_031_000G1_scaffold_322_12
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12343..12780)
DNA (438bp) protein (146aa)
Transcriptional regulator, MarR family n=7 Tax=Firmicutes RepID=E4LV85_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EGX72073.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
Transcriptional regulator, MarR family
L2_031_000G1_scaffold_322_13
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


comp(12794..13156)
DNA (363bp) protein (121aa)
50S ribosomal protein L20 n=7 Tax=Firmicutes RepID=E4LV84_9CLOT
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
LSU ribosomal protein L20P
L2_031_000G1_scaffold_322_14
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


comp(13174..13368)
DNA (195bp) protein (65aa)
50S ribosomal protein L35 n=7 Tax=Firmicutes RepID=E4LV83_9CLOT
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
LSU ribosomal protein L35P
L2_031_000G1_scaffold_322_15
Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(13394..13954)
DNA (561bp) protein (187aa)
Translation initiation factor IF-3 n=8 Tax=Firmicutes RepID=E2SRY0_9FIRM
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=658659 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 3_1_53.;"
infC; translation initiation factor IF-3
L2_031_000G1_scaffold_322_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14133..15281)
DNA (1149bp) protein (383aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1BA93_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQJ56207.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L2_031_000G1_scaffold_322_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15701..16051
DNA (351bp) protein (117aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LV80_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQJ56209.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L2_031_000G1_scaffold_322_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16766..17122)
DNA (357bp) protein (119aa)
Sporulation initiation factor Spo0A domain protein n=5 Tax=Firmicutes RepID=E4LV79_9CLOT
Sporulation initiation factor Spo0A family protein {ECO:0000313|EMBL:EQJ56210.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
sporulation transcription factor Spo0A
L2_031_000G1_scaffold_322_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17717..18607)
DNA (891bp) protein (297aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1BA96_9FIRM
Glycosyl hydrolases 25 family protein {ECO:0000313|EMBL:EQJ56212.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
glycosyl hydrolase family 25
L2_031_000G1_scaffold_322_20
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(18682..20607)
DNA (1926bp) protein (642aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1BA97_9FIRM
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EHO27537.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
diguanylate cyclase (GGDEF) domain
L2_031_000G1_scaffold_322_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20755..21258)
DNA (504bp) protein (168aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1B400_9FIRM
Acetyltransferase family protein {ECO:0000313|EMBL:EQJ56216.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Predicted acetyltransferase
L2_031_000G1_scaffold_322_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21940..22428)
DNA (489bp) protein (163aa)
DNA-deoxyinosine glycosylase {ECO:0000313|EMBL:EQJ56219.1}; EC=3.2.2.15 {ECO:0000313|EMBL:EQJ56219.1};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Uncharacterized protein n=2 Tax=Firmicutes RepID=R6UD98_9FIRM
hypothetical protein
L2_031_000G1_scaffold_322_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22422..23723)
DNA (1302bp) protein (434aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
rimO; Ribosomal protein S12 methylthiotransferase (EC:2.-.-.-)
Ribosomal protein S12 methylthiotransferase RimO n=3 Tax=Firmicutes RepID=H1BAA0_9FIRM
L2_031_000G1_scaffold_322_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23874..25121
DNA (1248bp) protein (416aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=H1BAA1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQJ56221.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L2_031_000G1_scaffold_322_25
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

25281..25721
DNA (441bp) protein (147aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=E4LV70_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC83728.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
hypothetical protein
L2_031_000G1_scaffold_322_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25785..26249
DNA (465bp) protein (155aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LV69_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQJ56223.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L2_031_000G1_scaffold_322_27
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26725..27288
DNA (564bp) protein (188aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LV68_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR37320.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L2_031_000G1_scaffold_322_28
unknown

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comp(27448..27663)
DNA (216bp) protein (72aa)

This feature has no annotations

L2_031_000G1_scaffold_322_29
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27812..28267
DNA (456bp) protein (152aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=E4LV66_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR37318.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L2_031_000G1_scaffold_322_30
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28611..29795)
DNA (1185bp) protein (395aa)
Aminotransferase, class I/II {ECO:0000313|EMBL:EFR37276.1}; EC=2.6.1.- {ECO:0000313|EMBL:EFR37276.1};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Aminotransferase, class I/II n=2 Tax=Firmicutes RepID=E4LV65_9CLOT
C-S lyase family protein
Displaying items 1-30 of 40 in total

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