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L2_031_000G1_scaffold_344

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_000G1_scaffold_344_1
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..2242
DNA (2241bp) protein (747aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8C0S6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN44002.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
TraG/TraD family protein
L2_031_000G1_scaffold_344_2
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2467..3024
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UFY0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67747.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_031_000G1_scaffold_344_3
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3136..3465
DNA (330bp) protein (110aa)
DNA-binding helix-turn-helix protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U986_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CCZ67746.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Helix-turn-helix.
L2_031_000G1_scaffold_344_4
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3501..4772
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TPZ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67745.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
sensor histidine kinase virs
L2_031_000G1_scaffold_344_5
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4741..5136)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9N868_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS79495.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
hypothetical protein
L2_031_000G1_scaffold_344_6
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5614..6159
DNA (546bp) protein (182aa)
Accessory protein regulator protein B n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TWQ1_9FIRM
Accessory protein regulator protein B {ECO:0000313|EMBL:CCZ67744.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Accessory gene regulator B.
L2_031_000G1_scaffold_344_7
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6137..6310
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TPN0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67743.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_031_000G1_scaffold_344_8
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6291..7016
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UFX4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67742.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
LytTr family DNA-binding response regulator
L2_031_000G1_scaffold_344_9
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7222..7365
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Veillonella sp. CAG:933 RepID=R5BP58_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC23248.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_031_000G1_scaffold_344_10
unknown

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7570..7869
DNA (300bp) protein (100aa)

This feature has no annotations

L2_031_000G1_scaffold_344_11
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7723..8085)
DNA (363bp) protein (121aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=B6FPC6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI95280.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
L2_031_000G1_scaffold_344_12
unknown

Not on your lists

8580..8984
DNA (405bp) protein (135aa)

This feature has no annotations

L2_031_000G1_scaffold_344_13
Johnsonella ignava, Johnsonella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9409..10377
DNA (969bp) protein (323aa)
Putative uncharacterized protein n=1 Tax=Johnsonella ignava ATCC 51276 RepID=G5GKB8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHI54808.1}; TaxID=679200 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Johnsonella.;" source="Johnsonella ignava ATCC 51276.;"
L2_031_000G1_scaffold_344_14
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10374..11165
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9IMJ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS23026.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
L2_031_000G1_scaffold_344_15
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11158..11991
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:257 RepID=R5XNZ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA06152.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
hypothetical protein
L2_031_000G1_scaffold_344_16
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11993..12637
DNA (645bp) protein (215aa)
Efflux ABC transporter, ATP-binding protein n=2 Tax=Clostridium botulinum RepID=C6DXW8_CLOBO
Multidrug ABC transporter ATP-binding protein {ECO:0000313|EMBL:KEH99182.1}; TaxID=1443125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum C/D str. BKT12695.;"
ABC transporter
L2_031_000G1_scaffold_344_17
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12778..14184
DNA (1407bp) protein (469aa)
ErfK/YbiS/YcfS/YnhG n=3 Tax=Lachnospiraceae RepID=A7AZ78_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49788.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
peptidoglycan transpeptidase precursor, ErfK-YbiS-YhnG family
L2_031_000G1_scaffold_344_18
unknown

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14213..14821
DNA (609bp) protein (203aa)

This feature has no annotations

L2_031_000G1_scaffold_344_19
unknown

Not on your lists

14818..15429
DNA (612bp) protein (204aa)

This feature has no annotations

L2_031_000G1_scaffold_344_20
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15515..17812)
DNA (2298bp) protein (766aa)
Putative uncharacterized protein n=2 Tax=Lachnospiraceae RepID=D4J5Y6_9FIRM
Domain of unknown function (DUF1906)./Putative peptidoglycan binding domain.
Uncharacterized protein {ECO:0000313|EMBL:CBK79757.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L2_031_000G1_scaffold_344_21
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17939..18442)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KJS9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN30734.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
L2_031_000G1_scaffold_344_22
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18493..19017)
DNA (525bp) protein (175aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM70380.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L2_031_000G1_scaffold_344_23
unknown

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19270..19689
DNA (420bp) protein (140aa)

This feature has no annotations

L2_031_000G1_scaffold_344_24
unknown

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19794..20732
DNA (939bp) protein (313aa)

This feature has no annotations

L2_031_000G1_scaffold_344_25
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20736..21482
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KI44_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS45896.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
L2_031_000G1_scaffold_344_26
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21466..22332
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9NBL7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS80503.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
hypothetical protein
L2_031_000G1_scaffold_344_27
Clostridium sp. CAG:632, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22329..22970
DNA (642bp) protein (214aa)
ABC transporter ATP-binding protein n=1 Tax=Clostridium sp. CAG:632 RepID=R5K9K1_9CLOT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCY57662.1}; TaxID=1262830 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:632.;"
ABC transporter
L2_031_000G1_scaffold_344_28
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23143..23559
DNA (417bp) protein (139aa)
Toxin secretion/phage lysis holin n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NA05_CLOSV
Toxin secretion/phage lysis holin {ECO:0000313|EMBL:EDS08498.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
toxin secretion/phage lysis holin
L2_031_000G1_scaffold_344_29
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23632..24600
DNA (969bp) protein (323aa)
Muramidase (Flagellum-specific) n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GNX2_9FIRM
Muramidase (flagellum-specific)
Muramidase (Flagellum-specific) {ECO:0000313|EMBL:CBL42507.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L2_031_000G1_scaffold_344_30
unknown

Not on your lists

comp(25260..25478)
DNA (219bp) protein (73aa)

This feature has no annotations

Displaying items 1-30 of 52 in total

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