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L2_031_000G1_scaffold_376

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_000G1_scaffold_376_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..399)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AU13_CLOBU
Glycogen debranching enzyme-like protein {ECO:0000313|EMBL:KJZ83468.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
glycogen debranching protein
L2_031_000G1_scaffold_376_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(418..2118)
DNA (1701bp) protein (567aa)
Bacterial extracellular solute-binding protein n=2 Tax=Clostridium butyricum RepID=B1QSY0_CLOBU
Peripheral protein {ECO:0000313|EMBL:KHD16557.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L2_031_000G1_scaffold_376_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2278..3123)
DNA (846bp) protein (282aa)
UPI0003D62DC7 related cluster n=1 Tax=unknown RepID=UPI0003D62DC7
Sugar ABC transporter, permease protein {ECO:0000313|EMBL:ETI90682.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L2_031_000G1_scaffold_376_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3123..4556)
DNA (1434bp) protein (478aa)
fructose-bisphosphate aldolase (EC:4.1.2.13)
UPI0003D5AD3F related cluster n=1 Tax=unknown RepID=UPI0003D5AD3F
Sugar ABC transporter, permease protein {ECO:0000313|EMBL:ETI90683.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
L2_031_000G1_scaffold_376_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4591..5868)
DNA (1278bp) protein (426aa)
UPI0003D697A1 related cluster n=1 Tax=unknown RepID=UPI0003D697A1
Uncharacterized protein {ECO:0000313|EMBL:ETI90684.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L2_031_000G1_scaffold_376_6
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6096..7796)
DNA (1701bp) protein (567aa)
Predicted signal transduction protein with a C-terminal ATPase domain (EC:2.7.13.3)
Putative sensor histidine kinase n=1 Tax=Clostridium butyricum 5521 RepID=B1QSX6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83715.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
L2_031_000G1_scaffold_376_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7780..9318)
DNA (1539bp) protein (513aa)
UPI0003D5DBEF related cluster n=1 Tax=unknown RepID=UPI0003D5DBEF
Response regulator receiver protein {ECO:0000313|EMBL:ETI90686.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
two-component system response regulator YesN
L2_031_000G1_scaffold_376_8
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9516..10424)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:505 RepID=R7AKX6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD61463.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
hypothetical protein
L2_031_000G1_scaffold_376_9
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10673..11479)
DNA (807bp) protein (269aa)
Extradiol ring-cleavage dioxygenase class III protein subunit B n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JPM3_CELLD
extradiol ring-cleavage dioxygenase class III protein subunit B
Extradiol ring-cleavage dioxygenase class III protein subunit B {ECO:0000313|EMBL:ADZ83683.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L2_031_000G1_scaffold_376_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11633..13027)
DNA (1395bp) protein (465aa)
23S rRNA (Uracil-5-)-methyltransferase RumA n=2 Tax=Clostridium butyricum RepID=B1QWI7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85703.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
RNA methyltransferase
L2_031_000G1_scaffold_376_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13444..14865)
DNA (1422bp) protein (474aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
pyk2; pyruvate kinase Pyk (EC:2.7.1.40)
Pyruvate kinase n=4 Tax=Clostridium butyricum RepID=B1QWI8_CLOBU
L2_031_000G1_scaffold_376_12
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14934..15893)
DNA (960bp) protein (320aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
pfkA; 6-phosphofructokinase PfkA (EC:2.7.1.11)
6-phosphofructokinase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6SWD0_9CLOT
L2_031_000G1_scaffold_376_13
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16542..20126)
DNA (3585bp) protein (1195aa)
dnaE; DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
DNA polymerase III subunit alpha n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1N7B5_9CLOT
L2_031_000G1_scaffold_376_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20896..21180)
DNA (285bp) protein (95aa)
Stress responsive alpha-beta barrel domain protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K9Q1_CLOBU
stress responsive A/B barrel domain-containing protein
Dabb {ECO:0000313|EMBL:KJZ85698.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
L2_031_000G1_scaffold_376_15
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21273..22220)
DNA (948bp) protein (316aa)
Sporulation protein n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FY45_CLOPA
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420, ECO:0000256|SAAS:SAAS00005305}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
hypothetical protein
L2_031_000G1_scaffold_376_16
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22249..23601)
DNA (1353bp) protein (451aa)
Putative gluconeogenesis factor n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MXD5_CLOSA
hypothetical protein
Putative gluconeogenesis factor {ECO:0000256|HAMAP-Rule:MF_00973}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_031_000G1_scaffold_376_17
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23598..24482)
DNA (885bp) protein (295aa)
GlmZ(SRNA)-inactivating NTPase n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FVR0_CLOPA
Nucleotide-binding protein X276_15800 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
hypothetical protein
L2_031_000G1_scaffold_376_18
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24623..25537)
DNA (915bp) protein (305aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Clostridium sp. DL-VIII RepID=G7MAM9_9CLOT
murB; UDP-N-acetylenolpyruvoylglucosamine reductase MurB
L2_031_000G1_scaffold_376_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25650..27524)
DNA (1875bp) protein (625aa)
UvrABC system protein C n=2 Tax=Clostridium butyricum RepID=B1QWK1_CLOBU
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
uvrC; UvrABC system protein C
L2_031_000G1_scaffold_376_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27740..29218)
DNA (1479bp) protein (493aa)
Penicillin-binding protein n=3 Tax=Clostridium butyricum RepID=B1QWK2_CLOBU
Peptidoglycan glycosyltransferase {ECO:0000313|EMBL:EEP55745.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
peptidoglycan glycosyltransferase
L2_031_000G1_scaffold_376_21
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29222..30484)
DNA (1263bp) protein (421aa)
Bacterial cell division membrane protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TUC9_9CLOT
Bacterial cell division membrane protein {ECO:0000313|EMBL:EKQ50412.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
rodA; FtsW-like protein RodA
L2_031_000G1_scaffold_376_22

Not on your lists

comp(30604..31047)
DNA (444bp) protein (148aa)
FHA domain-containing protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6SWD7_9CLOT
FHA-domain containing secreted protein {ECO:0000313|EMBL:ETJ16600.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
FHA domain-containing protein
L2_031_000G1_scaffold_376_23
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31300..34125)
DNA (2826bp) protein (942aa)
UvrABC system protein A n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MXI6_CLOSA
uvrA; UvrABC system protein A
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_031_000G1_scaffold_376_24
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34224..36200)
DNA (1977bp) protein (659aa)
UvrABC system protein B n=1 Tax=Clostridium sp. DL-VIII RepID=G7MAN5_9CLOT
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
excinuclease ABC subunit B
L2_031_000G1_scaffold_376_25
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36416..37216)
DNA (801bp) protein (267aa)
Signal protein PDZ n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FY54_CLOPA
Signal protein PDZ {ECO:0000313|EMBL:ETD68372.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
C-terminal PDZ domain-containing protein
Displaying 25 items

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