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L2_031_000G1_scaffold_390

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_000G1_scaffold_390_1
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(327..758)
DNA (432bp) protein (144aa)
Transcriptional regulator, Spx/MgsR family n=7 Tax=Firmicutes RepID=E4LU56_9CLOT
Transcriptional regulator, Spx/MgsR family {ECO:0000313|EMBL:EFR37659.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
hypothetical protein
L2_031_000G1_scaffold_390_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1131..2117
DNA (987bp) protein (329aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase n=2 Tax=Firmicutes RepID=H1BAG1_9FIRM
L2_031_000G1_scaffold_390_3
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2254..2967
DNA (714bp) protein (238aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=G1VUG9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC87387.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
Predicted ATPase
L2_031_000G1_scaffold_390_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3018..3503
DNA (486bp) protein (162aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=H1B1R1_9FIRM
Acetyltransferase family protein {ECO:0000313|EMBL:EQJ62133.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
diamine acetyltransferase
L2_031_000G1_scaffold_390_5
unknown

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comp(3623..3793)
DNA (171bp) protein (57aa)

This feature has no annotations

L2_031_000G1_scaffold_390_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4249..5121)
DNA (873bp) protein (291aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Undecaprenyl-diphosphatase n=5 Tax=Firmicutes RepID=E4LU63_9CLOT
undecaprenyl pyrophosphate phosphatase
L2_031_000G1_scaffold_390_7
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5277..6590)
DNA (1314bp) protein (438aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutamic acid-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00639}; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase {ECO:0000256|HAMAP-Rule:MF_00639}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9)
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=2 Tax=Erysipelotrichaceae RepID=H1B1R3_9FIRM
L2_031_000G1_scaffold_390_8
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(6592..7554)
DNA (963bp) protein (321aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00038}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=7 Tax=Firmicutes RepID=E4LU65_9CLOT
L2_031_000G1_scaffold_390_9
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7545..8969)
DNA (1425bp) protein (475aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; Meso-diaminopimelate-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Clostridium difficile P28 RepID=T4P3H2_CLODI
L2_031_000G1_scaffold_390_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8953..10872)
DNA (1920bp) protein (640aa)
Uncharacterized protein n=6 Tax=Firmicutes RepID=G1VUG3_9FIRM
Penicillin binding transpeptidase domain protein {ECO:0000313|EMBL:EQJ62126.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
stage V sporulation protein D
L2_031_000G1_scaffold_390_11
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

11102..11992
DNA (891bp) protein (297aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=H1B1R7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC87394.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
transcriptional regulator
L2_031_000G1_scaffold_390_12
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13379..15283)
DNA (1905bp) protein (635aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=H1B1R8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC87396.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
hypothetical protein
L2_031_000G1_scaffold_390_13
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15285..16034)
DNA (750bp) protein (250aa)
polyamine-transporting ATPase (EC:3.6.3.31)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=H1B1R9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC87397.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L2_031_000G1_scaffold_390_14
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16120..17127)
DNA (1008bp) protein (336aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=4 Tax=Firmicutes RepID=E4LU73_9CLOT
integral membrane sensor signal transduction histidine kinase
L2_031_000G1_scaffold_390_15
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17124..17792)
DNA (669bp) protein (223aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae (miscellaneous) RepID=H1B1S1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27343.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
transcriptional regulator
L2_031_000G1_scaffold_390_16
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(18332..20500)
DNA (2169bp) protein (723aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 21_3 RepID=H1B1S2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX72869.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
pbpB; penicillin-binding protein 2B
L2_031_000G1_scaffold_390_17
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20550..22718)
DNA (2169bp) protein (723aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 21_3 RepID=H1B1S3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27346.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
penicillin-binding protein 2B
L2_031_000G1_scaffold_390_18
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(22734..23051)
DNA (318bp) protein (106aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=G1VUF4_9FIRM
Cell division protein FtsL {ECO:0000313|EMBL:ENY84546.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
hypothetical protein
L2_031_000G1_scaffold_390_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23051..23986)
DNA (936bp) protein (312aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Clostridium difficile P28 RepID=T4P3F5_CLODI
16S rRNA methyltransferase
L2_031_000G1_scaffold_390_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23983..24414)
DNA (432bp) protein (144aa)
Protein MraZ n=5 Tax=Firmicutes RepID=E4LU79_9CLOT
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
mraZ protein
L2_031_000G1_scaffold_390_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24515..25642)
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P28 RepID=T4P2X6_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQJ62110.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L2_031_000G1_scaffold_390_22
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(25820..27403)
DNA (1584bp) protein (528aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=H1B1S8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27351.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
Group I intron
L2_031_000G1_scaffold_390_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27629..31975)
DNA (4347bp) protein (1449aa)
DNA polymerase III PolC-type {ECO:0000256|HAMAP-Rule:MF_00356}; Short=PolIII {ECO:0000256|HAMAP-Rule:MF_00356};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00356};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
DNA polymerase III polC-type n=3 Tax=Firmicutes RepID=H1B1S9_9FIRM
polC; DNA polymerase III subunit alpha
L2_031_000G1_scaffold_390_24
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(32356..32748)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1BAI6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27353.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
FMN-binding domain-containing protein
L2_031_000G1_scaffold_390_25
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(32738..33229)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1BAI7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27354.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
Flavodoxin
L2_031_000G1_scaffold_390_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33320..33937)
DNA (618bp) protein (206aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1B1T2_9FIRM
Bacterial regulatory s, tetR family protein {ECO:0000313|EMBL:EQJ62101.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
TetR family transcriptional regulator
L2_031_000G1_scaffold_390_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33921..34577)
DNA (657bp) protein (219aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1B1T3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQJ62100.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L2_031_000G1_scaffold_390_28
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(34565..35053)
DNA (489bp) protein (163aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=E4LU88_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY84536.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
multimeric flavodoxin WrbA-like protein
L2_031_000G1_scaffold_390_29
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(35352..36308)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 21_3 RepID=H1B1T5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC86019.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
cation antiporter
Displaying 29 items

View Taxonomy