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L2_031_000G1_scaffold_393

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_000G1_scaffold_393_1
unknown

Not on your lists

comp(84..224)
DNA (141bp) protein (47aa)
hypothetical protein
L2_031_000G1_scaffold_393_2
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(275..1597)
DNA (1323bp) protein (441aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MRY9_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX43559.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_031_000G1_scaffold_393_3
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1839..3131
DNA (1293bp) protein (431aa)
Guanine/hypoxanthine permease PbuO n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MSH7_CLOSA
pbuO; guanine/hypoxanthine permease PbuO
Guanine/hypoxanthine permease PbuO {ECO:0000313|EMBL:AGX43560.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_031_000G1_scaffold_393_4
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3223..4677)
DNA (1455bp) protein (485aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
Nicotinate phosphoribosyltransferase n=1 Tax=Clostridium sp. CAG:265 RepID=R6KVU9_9CLOT
nicotinate phosphoribosyltransferase
L2_031_000G1_scaffold_393_5
unknown

Not on your lists

comp(4667..5044)
DNA (378bp) protein (126aa)

This feature has no annotations

L2_031_000G1_scaffold_393_6
Clostridium sp. CAG:510, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5374..6576)
DNA (1203bp) protein (401aa)
Beta-lactamase n=1 Tax=Clostridium sp. CAG:510 RepID=R6CTD0_9CLOT
Beta-lactamase {ECO:0000313|EMBL:CDA68497.1}; TaxID=1262816 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:510.;"
Beta-lactamase class C and other penicillin binding proteins
L2_031_000G1_scaffold_393_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6746..7864)
DNA (1119bp) protein (373aa)
UPI0003D69A57 related cluster n=1 Tax=unknown RepID=UPI0003D69A57
Uncharacterized protein {ECO:0000313|EMBL:ETI88257.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
GDSL family lipase
L2_031_000G1_scaffold_393_8
unknown

Not on your lists

8148..8303
DNA (156bp) protein (52aa)

This feature has no annotations

L2_031_000G1_scaffold_393_9
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8457..8927)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H6S0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96986.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
phosphoesterase, HXTX
L2_031_000G1_scaffold_393_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9199..10701
DNA (1503bp) protein (501aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AWN9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KHD16119.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hypothetical protein
L2_031_000G1_scaffold_393_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10964..11767)
DNA (804bp) protein (268aa)
HAD superfamily hydrolase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K6N1_CLOBU
HAD superfamily hydrolase {ECO:0000313|EMBL:EEP53520.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
Cof-like hydrolase
L2_031_000G1_scaffold_393_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11991..13322)
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AEC5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ31134.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Serine-type D-Ala-D-Ala carboxypeptidase
L2_031_000G1_scaffold_393_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13649..15382)
DNA (1734bp) protein (578aa)
xenobiotic-transporting ATPase (EC:3.6.3.44)
UPI0003D62CA0 related cluster n=1 Tax=unknown RepID=UPI0003D62CA0
Lipid A export ATP-binding/permease protein MsbA {ECO:0000313|EMBL:ETI88242.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
L2_031_000G1_scaffold_393_14
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15666..17423)
DNA (1758bp) protein (586aa)
RNA helicase n=1 Tax=Clostridium botulinum RepID=UPI0003739807
ATP-dependent RNA helicase, superfamily II
Helicase domain protein {ECO:0000313|EMBL:EES47827.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
L2_031_000G1_scaffold_393_15
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17611..18528)
DNA (918bp) protein (306aa)
SufBD protein n=1 Tax=Clostridium sporogenes PA 3679 RepID=G9F529_CLOSG
Uncharacterized protein {ECO:0000313|EMBL:AJD29666.1}; TaxID=1408284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum Prevot_594.;"
ABC transporter system permease involved in Fe-S cluster assembly
L2_031_000G1_scaffold_393_16
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18532..19281)
DNA (750bp) protein (250aa)
ABC transporter related protein n=1 Tax=Clostridium sporogenes PA 3679 RepID=G9F528_CLOSG
ABC transporter related protein {ECO:0000313|EMBL:EHN13490.1}; TaxID=1075091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes PA 3679.;"
ABC transporter
L2_031_000G1_scaffold_393_17
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19554..21293)
DNA (1740bp) protein (580aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MNX8_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF57913.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_031_000G1_scaffold_393_18
Desulfitobacterium dichloroeliminans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21413..22762)
DNA (1350bp) protein (450aa)
Uncharacterized protein n=1 Tax=Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1) RepID=L0F837_DESDL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA68821.1}; TaxID=871963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1).;"
L2_031_000G1_scaffold_393_19
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22875..23774)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MV86_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX43556.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_031_000G1_scaffold_393_20
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24080..26248
DNA (2169bp) protein (723aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V425_CLOBA
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Diguanylate cyclase {ECO:0000313|EMBL:KIL07447.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L2_031_000G1_scaffold_393_21
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26440..27540
DNA (1101bp) protein (367aa)
Metal dependent phosphohydrolase n=1 Tax=Clostridium sp. DL-VIII RepID=G7M6Q5_9CLOT
Metal dependent phosphohydrolase {ECO:0000313|EMBL:EHJ01353.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
metal dependent phosphohydrolase
L2_031_000G1_scaffold_393_22
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27663..28025
DNA (363bp) protein (121aa)
Integral membrane protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V2V9_CLOBA
hypothetical protein
Membrane protein {ECO:0000313|EMBL:KIL07249.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L2_031_000G1_scaffold_393_23
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28059..28709)
DNA (651bp) protein (217aa)
Predicted membrane protein n=1 Tax=Roseburia sp. CAG:182 RepID=R7R282_9FIRM
Predicted membrane protein {ECO:0000313|EMBL:CDF43660.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
Predicted membrane protein
L2_031_000G1_scaffold_393_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28842..30281)
DNA (1440bp) protein (480aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00222465}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AN37_CLOBU
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B
L2_031_000G1_scaffold_393_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30294..31733)
DNA (1440bp) protein (480aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
Glutamyl-tRNA(Gln) amidotransferase subunit A n=2 Tax=Clostridium butyricum RepID=M8KEX8_CLOBU
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A
L2_031_000G1_scaffold_393_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31746..32027)
DNA (282bp) protein (94aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00122};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=4 Tax=Clostridium butyricum RepID=B1QS36_CLOBU
glutamyl-tRNA(Gln) amidotransferase, C subunit
L2_031_000G1_scaffold_393_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(32199..33488)
DNA (1290bp) protein (430aa)
aspS2; aspartate--tRNA ligase AspS (EC:6.1.1.12)
Aspartyl-tRNA synthetase n=3 Tax=Clostridium butyricum RepID=B1QS37_CLOBU
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:KHD13883.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
L2_031_000G1_scaffold_393_28
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34116..34514)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZDW0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ96128.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
hypothetical protein
L2_031_000G1_scaffold_393_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34536..35090)
DNA (555bp) protein (185aa)
GCN5-related N-acetyltransferase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JDM1_CLOBU
GCN5 family acetyltransferase {ECO:0000313|EMBL:KHD14062.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
acetyltransferase family
L2_031_000G1_scaffold_393_30
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35175..36305)
DNA (1131bp) protein (377aa)
Lysophospholipase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TWX0_9CLOT
Lysophospholipase {ECO:0000313|EMBL:EKQ57290.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
lysophospholipase l2 pldb, hydrolase of alpha/beta superfamily
Displaying items 1-30 of 38 in total

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