ggKbase home page

L2_031_000G1_scaffold_404

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_000G1_scaffold_404_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..2950
DNA (2949bp) protein (983aa)
carB; Carbamoyl-phosphate synthase large chain (EC:6.3.5.5)
Carbamoyl-phosphate synthase large chain {ECO:0000256|HAMAP-Rule:MF_01210}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01210};; Carbamoyl-phosphate synthetase ammonia chain {ECO:0000256|HAMAP-Rule:MF_01210}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Carbamoyl-phosphate synthase large chain n=4 Tax=Bifidobacterium breve RepID=F9XXS4_BIFBU
L2_031_000G1_scaffold_404_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3027..3947
DNA (921bp) protein (307aa)
Orotidine 5'-phosphate decarboxylase n=6 Tax=Bifidobacterium breve RepID=F6C588_BIFBA
Orotidine 5'-phosphate decarboxylase
Orotidine 5'-phosphate decarboxylase {ECO:0000313|EMBL:EPD76965.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L2_031_000G1_scaffold_404_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3984..4574
DNA (591bp) protein (197aa)
gmk; guanylate kinase (EC:2.7.4.8)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Guanylate kinase n=4 Tax=Bifidobacterium breve RepID=F6C587_BIFBA
L2_031_000G1_scaffold_404_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4608..5315)
DNA (708bp) protein (236aa)
Exonuclease, DNA polymerase III, epsilon subunit family {ECO:0000313|EMBL:EFE89159.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EFE89159.1};; Putative exonuclease {ECO:0000313|EMBL:BAQ99620.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Exonuclease, DNA polymerase III, epsilon subunit family n=2 Tax=Bifidobacterium breve RepID=D4BNC2_BIFBR
DNA polymerase III alpha subunit
L2_031_000G1_scaffold_404_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5440..5901)
DNA (462bp) protein (154aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=U2CSX1_BIFBR
Hypothetical protein, very proline rich
Uncharacterized protein {ECO:0000313|EMBL:ERI87153.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_031_000G1_scaffold_404_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6083..8269
DNA (2187bp) protein (729aa)
Putative translation elongation factor G n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2DZI6_BIFBR
Putative translation elongation factor G {ECO:0000313|EMBL:ERI87152.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Translation elongation / release factor, GTPase
L2_031_000G1_scaffold_404_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8250..8918)
DNA (669bp) protein (223aa)
Phospholipase/carboxylesterase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E457_BIFBR
Phospholipase/carboxylesterase {ECO:0000313|EMBL:ERI87151.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Phospholipase/carboxylesterase
L2_031_000G1_scaffold_404_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9067..10299
DNA (1233bp) protein (411aa)
metC_1; cystathionine beta-lyase (EC:4.4.1.8)
Putative cystathionine beta-lyase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CRJ8_BIFBR
Putative cystathionine beta-lyase {ECO:0000313|EMBL:ERI87150.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_031_000G1_scaffold_404_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10464..10652
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2C9J4_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:ERI87149.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_031_000G1_scaffold_404_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10706..10957
DNA (252bp) protein (84aa)
Glutaredoxin n=3 Tax=Bifidobacterium breve RepID=F6C581_BIFBA
Glutaredoxin
Glutaredoxin {ECO:0000313|EMBL:AHJ20822.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L2_031_000G1_scaffold_404_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11690..11857
DNA (168bp) protein (56aa)
Uncharacterized protein n=3 Tax=Bifidobacterium breve RepID=F6C579_BIFBA
Cth
Cth {ECO:0000313|EMBL:AHJ20823.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L2_031_000G1_scaffold_404_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12017..12928
DNA (912bp) protein (304aa)
SPFH/Band 7/PHB domain protein n=6 Tax=Bifidobacterium breve RepID=F6C578_BIFBA
Hypothetical protein, Hypothetical secreted protease
SPFH/Band 7/PHB domain protein {ECO:0000313|EMBL:AEF26497.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L2_031_000G1_scaffold_404_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13286..13723
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZRM0_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD76975.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Hypothetical protein, ATPase
L2_031_000G1_scaffold_404_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13785..14630)
DNA (846bp) protein (282aa)
Phospholipase, patatin family n=2 Tax=Bifidobacterium breve RepID=H3L1F3_BIFBR
Phospholipase
Phospholipase, patatin family {ECO:0000313|EMBL:ERI87143.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_031_000G1_scaffold_404_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14757..15551)
DNA (795bp) protein (265aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Glutamate racemase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2DZH5_BIFBR
Glutamate racemase
L2_031_000G1_scaffold_404_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15682..16581
DNA (900bp) protein (300aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Diaminopimelate epimerase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E446_BIFBR
Diaminopimelate epimerase
L2_031_000G1_scaffold_404_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16650..17369)
DNA (720bp) protein (240aa)
Vitamin K epoxide reductase family n=3 Tax=Bifidobacterium breve RepID=F6C574_BIFBA
putative membrane spanning protein, contains a vitamin K epoxide reductase domain
Uncharacterized protein {ECO:0000313|EMBL:EPD76979.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L2_031_000G1_scaffold_404_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17496..18389
DNA (894bp) protein (298aa)
PHP domain-containing protein (EC:3.1.3.-)
PHP domain protein n=2 Tax=Bifidobacterium breve RepID=F6C573_BIFBA
PHP domain protein {ECO:0000313|EMBL:ERI87139.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_031_000G1_scaffold_404_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18446..18670)
DNA (225bp) protein (75aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=F6C572_BIFBA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF27816.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L2_031_000G1_scaffold_404_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18776..20407)
DNA (1632bp) protein (544aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2DZH0_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:ERI87137.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
phosphotransferase enzyme domain protein
L2_031_000G1_scaffold_404_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20490..22037
DNA (1548bp) protein (516aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
UvrD/REP helicase n=3 Tax=Bifidobacterium breve RepID=U2E442_BIFBR
DNA helicase
L2_031_000G1_scaffold_404_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22108..23838)
DNA (1731bp) protein (577aa)
Putative hydrolase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CRI3_BIFBR
Putative hydrolase {ECO:0000313|EMBL:ERI87135.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Hypothetical protein
L2_031_000G1_scaffold_404_23
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23919..24929
DNA (1011bp) protein (337aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XY20_BIFBU
Hypothetical protein containing Lon protease motif
Uncharacterized protein {ECO:0000313|EMBL:ABE95345.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L2_031_000G1_scaffold_404_24
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25021..25437
DNA (417bp) protein (139aa)
Uncharacterized protein n=6 Tax=Bifidobacterium breve RepID=F6C567_BIFBA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF28043.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L2_031_000G1_scaffold_404_25
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25762..27360
DNA (1599bp) protein (533aa)
DivIVA domain repeat protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2DZG4_BIFBR
DivIVA domain repeat protein {ECO:0000313|EMBL:ERI87132.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
DivIVA domain repeat-containing protein
L2_031_000G1_scaffold_404_26
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27357..28547
DNA (1191bp) protein (397aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E438_BIFBR
1-deoxy-D-xylulose 5-phosphate reductoisomerase
L2_031_000G1_scaffold_404_27
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28544..29767
DNA (1224bp) protein (408aa)
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=5 Tax=Bifidobacterium breve RepID=F6C564_BIFBA
L2_031_000G1_scaffold_404_28
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29842..31590
DNA (1749bp) protein (583aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2C9H3_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:ERI87129.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
putative membrane spanning protein
L2_031_000G1_scaffold_404_29
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31623..32342
DNA (720bp) protein (240aa)
DNA repair protein RecO n=5 Tax=Bifidobacterium breve RepID=F6C562_BIFBA
DNA repair protein recO
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_031_000G1_scaffold_404_30
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32339..33133
DNA (795bp) protein (265aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Isoprenyl transferase n=5 Tax=Bifidobacterium breve RepID=F9XY27_BIFBU
Undecaprenyl pyrophosphate synthetase
Displaying items 1-30 of 40 in total

View Taxonomy