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L2_031_000G1_scaffold_419

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_000G1_scaffold_419_1
Streptococcus salivarius, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(3..740)
DNA (738bp) protein (246aa)
rRNA adenine N-6-methyltransferase n=174 Tax=Firmicutes RepID=ERMB_ENTFA
ermB; ribosomal RNA adenine N-6-methyltransferaseadenine dimethylase family protein
rRNA adenine N-6-methyltransferase {ECO:0000313|EMBL:EEK09794.1}; TaxID=596322 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus salivarius SK126.;"
L2_031_000G1_scaffold_419_2

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comp(737..961)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Enterococcus faecium EnGen0178 RepID=R2AZN5_ENTFC
Uncharacterized protein {ECO:0000313|EMBL:AGW28680.1}; TaxID=1348854 species="Bacteria; environmental samples.;" source="uncultured bacterium EB1.;"
L2_031_000G1_scaffold_419_3
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1184..2320
DNA (1137bp) protein (379aa)
Site-specific recombinase n=11 Tax=Bacteria RepID=C9CCW8_ENTFC
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:ERI80232.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Site-specific recombinase XerD
L2_031_000G1_scaffold_419_4
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2581..2958
DNA (378bp) protein (126aa)
Predicted protein n=12 Tax=Bacteria RepID=C9CCW9_ENTFC
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERI81606.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
putative Xre family DNA-binding protein
L2_031_000G1_scaffold_419_5
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3121..3675)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1ALC5_9FIRM
Putative toxin-antitoxin system, toxin component {ECO:0000313|EMBL:ERI81605.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L2_031_000G1_scaffold_419_6
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3727..4176)
DNA (450bp) protein (150aa)
DNA-binding helix-turn-helix protein n=12 Tax=Bacteria RepID=E8LH37_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOQ38702.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
putative transcriptional regulator
L2_031_000G1_scaffold_419_7
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4463..5026
DNA (564bp) protein (188aa)
Uncharacterized protein n=11 Tax=root RepID=N9VVN5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ19585.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L2_031_000G1_scaffold_419_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5289..5594
DNA (306bp) protein (102aa)
Predicted transcriptional regulators n=11 Tax=Firmicutes RepID=D4K4P1_9FIRM
Predicted transcriptional regulators
Predicted transcriptional regulators {ECO:0000313|EMBL:CBK98484.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_031_000G1_scaffold_419_9
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6109..6516
DNA (408bp) protein (136aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
mRNA interferase n=11 Tax=root RepID=E8LH40_9FIRM
Growth inhibitor
L2_031_000G1_scaffold_419_10
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6523..6759
DNA (237bp) protein (79aa)
DNA binding domain, excisionase family n=12 Tax=root RepID=D4K4P0_9FIRM
DNA binding domain, excisionase family
Excisionase family DNA binding domain-containing protein {ECO:0000313|EMBL:EOQ38706.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L2_031_000G1_scaffold_419_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6877..7500
DNA (624bp) protein (208aa)
DNA binding domain, excisionase family n=12 Tax=root RepID=D4K4N9_9FIRM
DNA binding domain, excisionase family
DNA binding domain, excisionase family {ECO:0000313|EMBL:CBK98482.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_031_000G1_scaffold_419_12
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7505..8878
DNA (1374bp) protein (458aa)
Site-specific recombinase, phage integrase family n=11 Tax=root RepID=E8LH43_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:ERI81598.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Site-specific recombinase XerD
L2_031_000G1_scaffold_419_13
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8964..9269
DNA (306bp) protein (102aa)
Predicted protein n=11 Tax=Firmicutes RepID=C9CCX8_ENTFC
Uncharacterized protein {ECO:0000313|EMBL:EOQ38709.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L2_031_000G1_scaffold_419_14
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9767..11002)
DNA (1236bp) protein (412aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=N9X4C8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ63924.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Phage integrase family.
L2_031_000G1_scaffold_419_15
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10956..11117)
DNA (162bp) protein (54aa)
Uncharacterized protein n=6 Tax=Clostridium clostridioforme RepID=N9XG16_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ63923.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Phage integrase family.
L2_031_000G1_scaffold_419_16
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11163..11414)
DNA (252bp) protein (84aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FIB8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF03879.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
DNA binding domain, excisionase family
L2_031_000G1_scaffold_419_17
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11720..12103
DNA (384bp) protein (128aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=N9VVM1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ63921.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
L2_031_000G1_scaffold_419_18
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12395..12841
DNA (447bp) protein (149aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=N9XFA7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ63920.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L2_031_000G1_scaffold_419_19
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12802..12993
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9ZGJ1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ19544.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L2_031_000G1_scaffold_419_20
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12990..13247
DNA (258bp) protein (86aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=N9X4C2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ63919.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Domain of unknown function (DUF1814).
L2_031_000G1_scaffold_419_21
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13216..13761
DNA (546bp) protein (182aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=N9XG10_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ63918.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Domain of unknown function (DUF1814).
L2_031_000G1_scaffold_419_22
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14289..15101)
DNA (813bp) protein (271aa)
Gluconate 5-dehydrogenase n=7 Tax=Clostridium RepID=N9VV29_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF25456.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
gluconate 5-dehydrogenase
L2_031_000G1_scaffold_419_23
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15134..15769)
DNA (636bp) protein (212aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=N9VVL6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF25455.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
Ribose 5-phosphate isomerase RpiB
L2_031_000G1_scaffold_419_24
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15810..16790)
DNA (981bp) protein (327aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=N9ZGI7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF25454.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
sugar transporter
L2_031_000G1_scaffold_419_25
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16992..17234)
DNA (243bp) protein (81aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=N9X4B6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ63914.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
glycoside/pentoside/hexuronide:cation symporter
L2_031_000G1_scaffold_419_26
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17300..18496)
DNA (1197bp) protein (399aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=N9XG04_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ63913.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
glycosyl hydrolase family 88
L2_031_000G1_scaffold_419_27
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18699..19889)
DNA (1191bp) protein (397aa)
Uncharacterized protein n=5 Tax=Clostridium clostridioforme RepID=N9VV26_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ63912.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
AraC family transcriptional regulator
L2_031_000G1_scaffold_419_28
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20269..22128
DNA (1860bp) protein (620aa)
Uncharacterized protein n=6 Tax=Clostridium clostridioforme RepID=N9VVK8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ63911.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
transposase
L2_031_000G1_scaffold_419_29
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22474..22770)
DNA (297bp) protein (99aa)
glycine hydroxymethyltransferase (EC:2.1.2.1)
Uncharacterized protein n=6 Tax=Clostridium clostridioforme RepID=N9XF95_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ63910.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
L2_031_000G1_scaffold_419_30
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22965..23279
DNA (315bp) protein (105aa)
Uncharacterized protein n=6 Tax=Clostridium clostridioforme RepID=N9X4B0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ63909.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
Displaying items 1-30 of 47 in total

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