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L2_031_000G1_scaffold_456

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_000G1_scaffold_456_1
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..250)
DNA (249bp) protein (83aa)
Transcriptional regulatory protein, C-terminal domain protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P878_9FIRM
Transcriptional regulatory protein, C-terminal domain protein {ECO:0000313|EMBL:EDS12124.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
L2_031_000G1_scaffold_456_2
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(313..783)
DNA (471bp) protein (157aa)
Putative uncharacterized protein n=1 Tax=Clostridium clostridioforme 2_1_49FAA RepID=G5I857_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP15344.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L2_031_000G1_scaffold_456_3
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(780..1595)
DNA (816bp) protein (272aa)
Uncharacterized protein n=5 Tax=root RepID=A8RVF4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP15343.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L2_031_000G1_scaffold_456_4
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1608..2402)
DNA (795bp) protein (265aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T3B7_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN97211.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L2_031_000G1_scaffold_456_5
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2395..3321)
DNA (927bp) protein (309aa)
Lantibiotic ABC transporter ATP-binding protein n=3 Tax=Clostridiales RepID=G2T5H3_ROSHA
lantibiotic ABC transporter ATP-binding protein
Lantibiotic ABC transporter ATP-binding protein {ECO:0000313|EMBL:AEN97821.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L2_031_000G1_scaffold_456_6
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3456..4373)
DNA (918bp) protein (306aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
His Kinase A domain protein n=2 Tax=Clostridium difficile RepID=T3NWB6_CLODI
sensor protein
L2_031_000G1_scaffold_456_7
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4379..5071)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XG96_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45931.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_031_000G1_scaffold_456_8
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5064..5252)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P885_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS12131.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L2_031_000G1_scaffold_456_9
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5377..6006)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P886_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS12132.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L2_031_000G1_scaffold_456_10
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5999..8473)
DNA (2475bp) protein (825aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P887_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS12133.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L2_031_000G1_scaffold_456_11
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8470..10587)
DNA (2118bp) protein (706aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GPW7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93227.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L2_031_000G1_scaffold_456_12
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10698..12722)
DNA (2025bp) protein (675aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
DNA ligase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P889_9FIRM
NAD-dependent DNA ligase
L2_031_000G1_scaffold_456_13
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12722..13045)
DNA (324bp) protein (108aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0P890_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGA93225.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L2_031_000G1_scaffold_456_14
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13042..13299)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P891_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS12137.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L2_031_000G1_scaffold_456_15
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13366..15552)
DNA (2187bp) protein (729aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P892_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS12138.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L2_031_000G1_scaffold_456_16
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15554..16096)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P893_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS12139.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L2_031_000G1_scaffold_456_17
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16122..17042)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P894_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS12140.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L2_031_000G1_scaffold_456_18
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17115..17363)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P895_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS12141.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L2_031_000G1_scaffold_456_19
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17379..19172)
DNA (1794bp) protein (598aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P896_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS12142.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L2_031_000G1_scaffold_456_20
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19215..20372)
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P897_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS12143.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L2_031_000G1_scaffold_456_21
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20442..22715)
DNA (2274bp) protein (758aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
RecD/TraA family helicase (EC:3.1.11.5)
Putative helicase, RecD/TraA family n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P898_9FIRM
L2_031_000G1_scaffold_456_22
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22730..23797)
DNA (1068bp) protein (356aa)
YqaJ viral recombinase family protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P899_9FIRM
YqaJ viral recombinase family protein {ECO:0000313|EMBL:EDS12145.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
phage-type endonuclease
L2_031_000G1_scaffold_456_23
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24712..24912
DNA (201bp) protein (67aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0P8A2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGA93215.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L2_031_000G1_scaffold_456_24
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24965..26197
DNA (1233bp) protein (411aa)
Site-specific recombinase, phage integrase family n=2 Tax=Clostridiales RepID=B0P8A3_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EDS12149.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
integrase family protein
L2_031_000G1_scaffold_456_25
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26326..28290)
DNA (1965bp) protein (655aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
lysS; lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CXA3_9CLOT
L2_031_000G1_scaffold_456_26
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28302..28775)
DNA (474bp) protein (158aa)
Transcription elongation factor GreA n=3 Tax=Clostridiales RepID=G9YWW9_9FIRM
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
greA; transcription elongation factor GreA
L2_031_000G1_scaffold_456_27
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28928..29635)
DNA (708bp) protein (236aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CF54_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32793.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L2_031_000G1_scaffold_456_28
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29710..30129)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2B1H1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHM38230.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
Protein of unknown function (DUF2992).
L2_031_000G1_scaffold_456_29
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30441..31961
DNA (1521bp) protein (507aa)
Alkaline phosphatase family protein n=2 Tax=Clostridiales RepID=G9YWX2_9FIRM
Alkaline phosphatase family protein {ECO:0000313|EMBL:EHM38231.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
alkaline phosphatase
Displaying 29 items

View Taxonomy