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L2_031_000G1_scaffold_485

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_000G1_scaffold_485_1
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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236..805
DNA (570bp) protein (190aa)
Uncharacterized protein n=10 Tax=Firmicutes RepID=T3E524_CLODI
Putative uncharacterized protein {ECO:0000313|EMBL:EEV42378.1}; TaxID=565656 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium 1,230,933.;"
hypothetical protein
L2_031_000G1_scaffold_485_2
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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802..1593
DNA (792bp) protein (264aa)
Replication initiator A family protein n=1 Tax=Clostridium difficile DA00275 RepID=T3XUE9_CLODI
Replication initiator protein A {ECO:0000313|EMBL:ERI76398.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L2_031_000G1_scaffold_485_3
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1600..2427
DNA (828bp) protein (276aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CAX1_9FIRM
Putative sporulation initiation inhibitor protein Soj {ECO:0000313|EMBL:ERI76399.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
ATPases involved in chromosome partitioning
L2_031_000G1_scaffold_485_4
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2384..3310
DNA (927bp) protein (309aa)
ParB-like partition proteins n=17 Tax=Firmicutes RepID=D4K4R6_9FIRM
ParB-like partition proteins
ParB-like protein {ECO:0000313|EMBL:ERI76400.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L2_031_000G1_scaffold_485_5
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3319..3846
DNA (528bp) protein (176aa)
Predicted protein n=16 Tax=Firmicutes RepID=C9CCR7_ENTFC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ENZ19150.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
L2_031_000G1_scaffold_485_6
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3901..4542
DNA (642bp) protein (214aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=E8LH05_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45558.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_031_000G1_scaffold_485_7
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4553..4864
DNA (312bp) protein (104aa)
Uncharacterized protein n=13 Tax=root RepID=E8LH06_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGJ45557.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_031_000G1_scaffold_485_8
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4901..5383
DNA (483bp) protein (161aa)
Uncharacterized protein n=19 Tax=root RepID=E8LH07_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ENZ19147.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
L2_031_000G1_scaffold_485_9
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5383..6939
DNA (1557bp) protein (519aa)
Type IV secretion system protein VirD4 n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGR6_9FIRM
Type IV secretory pathway, VirD4 components
Putative uncharacterized protein {ECO:0000313|EMBL:EEV42387.1}; TaxID=565656 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium 1,230,933.;"
L2_031_000G1_scaffold_485_10
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6952..7272
DNA (321bp) protein (107aa)
Predicted protein n=11 Tax=root RepID=C9CCS2_ENTFC
Uncharacterized protein {ECO:0000313|EMBL:ERI76406.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L2_031_000G1_scaffold_485_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7278..7670
DNA (393bp) protein (131aa)
Helix-turn-helix n=16 Tax=Firmicutes RepID=D4K4R1_9FIRM
Helix-turn-helix.
Helix-turn-helix {ECO:0000313|EMBL:CBK98504.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_031_000G1_scaffold_485_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7754..7969
DNA (216bp) protein (72aa)
Uncharacterized protein n=14 Tax=Firmicutes RepID=C0FN71_9FIRM
conjugative transfer protein
Uncharacterized protein {ECO:0000313|EMBL:CBK98503.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_031_000G1_scaffold_485_13
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7995..8861
DNA (867bp) protein (289aa)
Uncharacterized protein n=15 Tax=root RepID=E8LH14_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEV42409.1}; TaxID=565656 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium 1,230,933.;"
hypothetical protein
L2_031_000G1_scaffold_485_14
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8879..9313
DNA (435bp) protein (145aa)
Uncharacterized protein n=13 Tax=Firmicutes RepID=E8LH15_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENZ19141.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L2_031_000G1_scaffold_485_15
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

9273..11660
DNA (2388bp) protein (796aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=T5RY51_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ46290.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
TraE protein
L2_031_000G1_scaffold_485_16
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11664..13400
DNA (1737bp) protein (579aa)
Cell wall-associated hydrolases (Invasion-associated proteins) n=18 Tax=root RepID=D4K4Q9_9FIRM
NlpC/P60 family protein {ECO:0000313|EMBL:ERI76412.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Cell wall-associated hydrolases (invasion-associated proteins)
L2_031_000G1_scaffold_485_17
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13415..13672
DNA (258bp) protein (86aa)
Predicted protein n=10 Tax=root RepID=C9CCU7_ENTFC
Uncharacterized protein {ECO:0000313|EMBL:ENZ19138.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L2_031_000G1_scaffold_485_18

Not on your lists

13662..14345
DNA (684bp) protein (228aa)
Uncharacterized protein n=19 Tax=root RepID=T3XYQ5_CLODI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGW28701.1}; TaxID=1348854 species="Bacteria; environmental samples.;" source="uncultured bacterium EB1.;"
L2_031_000G1_scaffold_485_19
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14497..15729
DNA (1233bp) protein (411aa)
Uncharacterized protein n=18 Tax=Bacteria RepID=E8LH20_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45545.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Predicted ATPase (AAA+ superfamily)
L2_031_000G1_scaffold_485_20
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15907..17982
DNA (2076bp) protein (692aa)
DNA topoisomerase III, bacteria and conjugative plasmid (EC:5.99.1.2)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
DNA topoisomerase n=14 Tax=root RepID=D4K4Q6_9FIRM
L2_031_000G1_scaffold_485_21
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17979..18824
DNA (846bp) protein (282aa)
Uncharacterized protein n=18 Tax=Bacteria RepID=E8LH22_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ENZ19134.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
L2_031_000G1_scaffold_485_22
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18838..19434
DNA (597bp) protein (199aa)
Uncharacterized protein n=18 Tax=Bacteria RepID=E8LH23_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERI76418.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L2_031_000G1_scaffold_485_23

Not on your lists

19431..19637
DNA (207bp) protein (69aa)
Uncharacterized protein n=11 Tax=root RepID=E8LH24_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:AGW28696.1}; TaxID=1348854 species="Bacteria; environmental samples.;" source="uncultured bacterium EB1.;"
hypothetical protein
L2_031_000G1_scaffold_485_24
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19656..27986
DNA (8331bp) protein (2777aa)
Helicase C-terminal domain protein n=20 Tax=root RepID=E8LH25_9FIRM
DEAD-like helicase {ECO:0000313|EMBL:ENZ19131.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
SNF2-like protein
L2_031_000G1_scaffold_485_25

Not on your lists

27986..28318
DNA (333bp) protein (111aa)
Uncharacterized protein n=9 Tax=root RepID=E8LH26_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:AGW28694.1}; TaxID=1348854 species="Bacteria; environmental samples.;" source="uncultured bacterium EB1.;"
Bacterial mobilisation protein (MobC).
L2_031_000G1_scaffold_485_26
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28435..28719
DNA (285bp) protein (95aa)
Uncharacterized protein n=10 Tax=root RepID=E8LH27_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERI76425.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L2_031_000G1_scaffold_485_27
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

28782..30194
DNA (1413bp) protein (471aa)
Relaxase/Mobilisation nuclease domain n=19 Tax=root RepID=D4K4Q0_9FIRM
Relaxase/Mobilisation nuclease domain.
Putative uncharacterized protein {ECO:0000313|EMBL:EEV42420.1}; TaxID=565656 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium 1,230,933.;"
L2_031_000G1_scaffold_485_28
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30473..31342)
DNA (870bp) protein (290aa)
Zn-dependent protease with chaperone function n=18 Tax=root RepID=D4K4P9_9FIRM
Zn-dependent protease with chaperone function
Peptidase, M48 family {ECO:0000313|EMBL:ERI76427.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L2_031_000G1_scaffold_485_29
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31392..31655)
DNA (264bp) protein (88aa)
Uncharacterized protein n=13 Tax=root RepID=N9VV56_9CLOT
Protein of unknown function (DUF1292).
Uncharacterized protein {ECO:0000313|EMBL:ENZ19599.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
L2_031_000G1_scaffold_485_30
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31672..31926)
DNA (255bp) protein (85aa)
Predicted protein n=9 Tax=Bacteria RepID=C9CCV7_ENTFC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERI76429.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Displaying items 1-30 of 34 in total

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