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L2_031_000G1_scaffold_512

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_000G1_scaffold_512_1
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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34..1524
DNA (1491bp) protein (497aa)
Inner membrane transporter YjeM n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MSK9_CLOSA
yjeM2; inner membrane transporter YjeM
Inner membrane transporter YjeM {ECO:0000313|EMBL:AGX43595.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_031_000G1_scaffold_512_2
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1862..2395
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6UB41_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ56399.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
L2_031_000G1_scaffold_512_3
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2411..2809
DNA (399bp) protein (133aa)
Regulatory protein GntR, HTH n=2 Tax=Clostridium RepID=A6LUM6_CLOB8
GntR family transcriptional regulator
Regulatory protein GntR, HTH {ECO:0000313|EMBL:ABR34056.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L2_031_000G1_scaffold_512_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2793..3686
DNA (894bp) protein (298aa)
UPI0003D61E12 related cluster n=1 Tax=unknown RepID=UPI0003D61E12
ABC transporter {ECO:0000313|EMBL:KHD16209.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
ytrB; ABC transporter ATP-binding protein YtrB
L2_031_000G1_scaffold_512_5
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3670..4731
DNA (1062bp) protein (354aa)
hypothetical protein n=1 Tax=Clostridium beijerinckii RepID=UPI0002F9ABF4
Uncharacterized protein {ECO:0000313|EMBL:ETD68730.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
hypothetical protein
L2_031_000G1_scaffold_512_6

Not on your lists

4951..5520
DNA (570bp) protein (190aa)
ECF-type riboflavin transporter, S component family protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VPL3_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:ETJ15308.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_031_000G1_scaffold_512_7
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5627..5908
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MSU3_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX43593.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_031_000G1_scaffold_512_8
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6117..6833
DNA (717bp) protein (239aa)
rluB2; ribosomal large subunit pseudouridine synthase B (EC:5.4.99.22)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
Pseudouridine synthase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MJW8_9CLOT
L2_031_000G1_scaffold_512_9
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7028..7924
DNA (897bp) protein (299aa)
Transcriptional regulator n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6T963_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:EKQ56393.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
transcriptional regulator
L2_031_000G1_scaffold_512_10
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7984..9315
DNA (1332bp) protein (444aa)
cca; CCA-adding enzyme Cca (EC:2.7.7.72)
tRNA nucleotidyltransferase/poly(A) polymerase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U5Q1_9CLOT
tRNA nucleotidyltransferase/poly(A) polymerase {ECO:0000313|EMBL:EKQ56392.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
L2_031_000G1_scaffold_512_11
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9400..9543)
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1M1J0_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF59485.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_031_000G1_scaffold_512_12
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9683..11722
DNA (2040bp) protein (680aa)
Penicillin-binding protein 3 n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MVW4_CLOSA
pbpC; penicillin-binding protein 3
Penicillin-binding protein 3 {ECO:0000313|EMBL:AGX43587.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_031_000G1_scaffold_512_13
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11806..12075
DNA (270bp) protein (90aa)
Late competence development protein ComFB n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U4K3_9CLOT
Late competence development protein ComFB {ECO:0000313|EMBL:EKQ56391.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
L2_031_000G1_scaffold_512_14
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12241..12849)
DNA (609bp) protein (203aa)
NUDIX hydrolase n=1 Tax=Clostridium botulinum RepID=UPI0003754F70
NUDIX domain protein {ECO:0000313|EMBL:AIY79613.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
nudix domain protein
L2_031_000G1_scaffold_512_15
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13066..14193
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M308_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI99812.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
hypothetical protein
L2_031_000G1_scaffold_512_16
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14253..17459
DNA (3207bp) protein (1069aa)
Tetratricopeptide repeat protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1LTC9_9CLOT
tetratricopeptide repeat protein
Tetratricopeptide repeat protein {ECO:0000313|EMBL:AGF56260.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_031_000G1_scaffold_512_17
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17488..19188
DNA (1701bp) protein (567aa)
Chaperone protein HscC n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MNH9_9CLOT
hscC2; chaperone protein HscC
Chaperone protein HscC {ECO:0000313|EMBL:AGF56261.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_031_000G1_scaffold_512_18
unknown

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19263..19436
DNA (174bp) protein (58aa)

This feature has no annotations

L2_031_000G1_scaffold_512_19
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19520..20134)
DNA (615bp) protein (205aa)
multidrug transporter MatE n=1 Tax=Clostridium botulinum RepID=UPI0002E9872A
Na+-driven multidrug efflux pump
Multidrug transporter MatE {ECO:0000313|EMBL:KIL09728.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L2_031_000G1_scaffold_512_20
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20158..20859)
DNA (702bp) protein (234aa)
MATE efflux family protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HG75_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:EEH98940.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
Na+-driven multidrug efflux pump
L2_031_000G1_scaffold_512_21
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21253..21618
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JJK0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83895.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
L2_031_000G1_scaffold_512_22
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21782..22648
DNA (867bp) protein (289aa)
Short-chain dehydrogenase/reductase SDR n=2 Tax=Clostridium RepID=A6LUK0_CLOB8
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABR34030.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L2_031_000G1_scaffold_512_23
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22736..23578
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MS04_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX43579.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_031_000G1_scaffold_512_24
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23820..24344
DNA (525bp) protein (175aa)
N-acetyltransferase GCN5 n=1 Tax=Clostridium intestinale URNW RepID=U2NGY4_9CLOT
N-acetyltransferase GCN5 {ECO:0000313|EMBL:ERK28383.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
N-acetyltransferase GCN5
L2_031_000G1_scaffold_512_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24484..25371
DNA (888bp) protein (296aa)
Transporter n=2 Tax=Clostridium butyricum RepID=C4ILA8_CLOBU
Transporter {ECO:0000313|EMBL:EEP54473.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
permeases of the drug/metabolite transporter (DMT) superfamily
L2_031_000G1_scaffold_512_26
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25541..25957
DNA (417bp) protein (139aa)
Flavodoxin n=1 Tax=Clostridium beijerinckii RepID=FLAV_CLOBE
Flavodoxin; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
flavodoxin
L2_031_000G1_scaffold_512_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25978..26616
DNA (639bp) protein (213aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1QXN5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP54041.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein DUF3793
L2_031_000G1_scaffold_512_28
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26997..27530
DNA (534bp) protein (178aa)
NUDIX hydrolase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MT00_CLOSA
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:AGX42572.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_031_000G1_scaffold_512_29
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27642..28775
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6UBI8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ57134.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
L2_031_000G1_scaffold_512_30
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28875..29243)
DNA (369bp) protein (123aa)
CotJC protein n=2 Tax=Clostridium botulinum B RepID=B2TPU7_CLOBB
protein cotJC
CotJC protein {ECO:0000313|EMBL:ACD23181.1}; Putative spore coat protein {ECO:0000313|EMBL:CDH91943.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
Displaying items 1-30 of 55 in total

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