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L2_031_000G1_scaffold_516

Search features with annotation key words

Displaying items 1-30 of 91 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_000G1_scaffold_516_1
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(94..450)
DNA (357bp) protein (119aa)
Uncharacterized protein n=10 Tax=Clostridium RepID=N9WT17_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ18619.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L2_031_000G1_scaffold_516_2
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(491..1087)
DNA (597bp) protein (199aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9WGU4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ18618.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
cell wall surface anchor family protein
L2_031_000G1_scaffold_516_3
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1208..1606
DNA (399bp) protein (133aa)
Acyl-CoA thioesterase n=9 Tax=Clostridium RepID=N9WI69_9CLOT
Acyl-CoA thioesterase {ECO:0000313|EMBL:ENZ18617.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
uncharacterized domain 1
L2_031_000G1_scaffold_516_4
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1638..1802
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5F9E8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX96826.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
L2_031_000G1_scaffold_516_5
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2218..2640)
DNA (423bp) protein (141aa)
Uncharacterized protein n=18 Tax=Clostridium RepID=A8RGK3_9CLOT
Amino acid-binding ACT protein {ECO:0000313|EMBL:ENZ18616.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
amino acid-binding ACT domain-containing protein
L2_031_000G1_scaffold_516_6
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2660..3958)
DNA (1299bp) protein (433aa)
Phenylacetate-coenzyme A ligase {ECO:0000256|PIRNR:PIRNR006444}; EC=6.2.1.30 {ECO:0000256|PIRNR:PIRNR006444};; Phenylacetyl-CoA ligase {ECO:0000256|PIRNR:PIRNR006444}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
phenylacetate--CoA ligase (EC:6.2.1.30)
Phenylacetate-CoA ligase n=10 Tax=Clostridium RepID=N9V8J8_9CLOT
L2_031_000G1_scaffold_516_7
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4052..4627)
DNA (576bp) protein (192aa)
Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit (EC:1.2.7.8)
Indolepyruvate ferredoxin oxidoreductase, beta subunit n=9 Tax=Clostridium RepID=N9WT11_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF25901.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
L2_031_000G1_scaffold_516_8
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4629..6377)
DNA (1749bp) protein (583aa)
Indolepyruvate oxidoreductase subunit IorA {ECO:0000256|PIRNR:PIRNR006439}; Short=IOR {ECO:0000256|PIRNR:PIRNR006439};; EC=1.2.7.8 {ECO:0000256|PIRNR:PIRNR006439};; Indolepyruvate ferredoxin oxidoreductase subunit alpha {ECO:0000256|PIRNR:PIRNR006439}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
indolepyruvate ferredoxin oxidoreductase, alpha subunit (EC:1.2.7.8)
Indolepyruvate ferredoxin oxidoreductase, alpha subunit n=6 Tax=Clostridium clostridioforme RepID=N9WGU0_9CLOT
L2_031_000G1_scaffold_516_9
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6444..7751)
DNA (1308bp) protein (436aa)
Phenylacetate-coenzyme A ligase {ECO:0000256|PIRNR:PIRNR006444}; EC=6.2.1.30 {ECO:0000256|PIRNR:PIRNR006444};; Phenylacetyl-CoA ligase {ECO:0000256|PIRNR:PIRNR006444}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
phenylacetate--CoA ligase (EC:6.2.1.30)
Phenylacetate-CoA ligase n=10 Tax=Clostridium RepID=N9WI67_9CLOT
L2_031_000G1_scaffold_516_10
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8128..8637)
DNA (510bp) protein (170aa)
Regulatory protein n=9 Tax=Clostridium RepID=N9V800_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF25898.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
hypothetical protein
L2_031_000G1_scaffold_516_11
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8757..9794)
DNA (1038bp) protein (346aa)
LacI family transcriptional regulator n=10 Tax=Clostridium RepID=N9V8J5_9CLOT
LacI family transcriptional regulator {ECO:0000313|EMBL:ENZ18610.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
LacI family transcriptional regulator
L2_031_000G1_scaffold_516_12
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9853..11028)
DNA (1176bp) protein (392aa)
ArgE/DapE family peptidase n=7 Tax=Clostridium RepID=N9XSV3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF25896.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
peptidase M20A family protein
L2_031_000G1_scaffold_516_13
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11104..11847)
DNA (744bp) protein (248aa)
Uncharacterized protein n=6 Tax=Clostridium clostridioforme RepID=N9WSZ7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ60292.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L2_031_000G1_scaffold_516_14
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11871..13151)
DNA (1281bp) protein (427aa)
argE; acetylornithine deacetylase (EC:3.5.1.16)
ArgE/DapE family peptidase n=7 Tax=Clostridium clostridioforme RepID=N9WGS3_9CLOT
ArgE/DapE family peptidase {ECO:0000313|EMBL:ENZ18607.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
L2_031_000G1_scaffold_516_15
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13162..14097)
DNA (936bp) protein (312aa)
ribosylpyrimidine nucleosidase (EC:3.2.2.8)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9WIR1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF25893.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
L2_031_000G1_scaffold_516_16
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14112..15047)
DNA (936bp) protein (312aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9V7W5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ18605.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
inner-membrane translocator
L2_031_000G1_scaffold_516_17
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15059..16102)
DNA (1044bp) protein (348aa)
Uncharacterized protein n=6 Tax=Clostridium clostridioforme RepID=N9V8H3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ60288.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
inner-membrane translocator
L2_031_000G1_scaffold_516_18
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16099..17724)
DNA (1626bp) protein (542aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9WSY6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ18603.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
ABC transporter
L2_031_000G1_scaffold_516_19
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17765..18883)
DNA (1119bp) protein (373aa)
Uncharacterized protein n=7 Tax=Clostridium clostridioforme RepID=N9WGR0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ60286.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
basic membrane lipoprotein
L2_031_000G1_scaffold_516_20
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19405..19719
DNA (315bp) protein (105aa)
UPF0597 protein HMPREF1097_05123 n=1 Tax=Clostridium bolteae 90B8 RepID=N9YXP9_9CLOT
UPF0597 protein BN723_01809 {ECO:0000256|HAMAP-Rule:MF_01845}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
hypothetical protein
L2_031_000G1_scaffold_516_21
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19726..21249)
DNA (1524bp) protein (508aa)
Iron only hydrogenase large subunit, C-terminal domain (EC:1.12.7.2)
[FeFe] hydrogenase, group B1/B3 n=8 Tax=Clostridium clostridioforme RepID=N9WIQ8_9CLOT
[FeFe] hydrogenase, group B1/B3 {ECO:0000313|EMBL:ENZ11652.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
L2_031_000G1_scaffold_516_22
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21655..22689)
DNA (1035bp) protein (345aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9V7V9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ60284.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L2_031_000G1_scaffold_516_23
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22676..23482)
DNA (807bp) protein (269aa)
hypothetical protein (EC:2.7.6.5)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9V8G9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ60283.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
L2_031_000G1_scaffold_516_24
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23548..24030)
DNA (483bp) protein (161aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Peptide deformylase n=9 Tax=Clostridium RepID=G5I5P6_9CLOT
N-formylmethionyl-tRNA deformylase
L2_031_000G1_scaffold_516_25
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24191..24622)
DNA (432bp) protein (144aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9WGQ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF25884.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
Predicted DNA-binding protein with PD1-like DNA-binding motif
L2_031_000G1_scaffold_516_26
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24917..25267
DNA (351bp) protein (117aa)
HxlR family transcriptional regulator n=6 Tax=Clostridium clostridioforme RepID=N9WIQ4_9CLOT
HxlR family transcriptional regulator {ECO:0000313|EMBL:ENZ60280.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Transcriptional regulator, HxlR family
L2_031_000G1_scaffold_516_27
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25311..26177)
DNA (867bp) protein (289aa)
Phospholipase n=7 Tax=Clostridium RepID=N9V7V2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB61073.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
Predicted esterase of the alpha-beta hydrolase superfamily
L2_031_000G1_scaffold_516_28
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26205..27476)
DNA (1272bp) protein (424aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9V8G4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF25881.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
hypothetical protein
L2_031_000G1_scaffold_516_29
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27565..27945)
DNA (381bp) protein (127aa)
N-acetyltransferase n=6 Tax=Clostridium clostridioforme RepID=N9WSX7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF25880.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
hypothetical protein
L2_031_000G1_scaffold_516_30
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28310..28948)
DNA (639bp) protein (213aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
Endonuclease III n=8 Tax=Clostridium RepID=G5I5P0_9CLOT
DNA-(apurinic or apyrimidinic site) lyase
Displaying items 1-30 of 91 in total

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