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L2_031_000G1_scaffold_521

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_000G1_scaffold_521_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(128..2743)
DNA (2616bp) protein (872aa)
UPI0003D69A8A related cluster n=1 Tax=unknown RepID=UPI0003D69A8A
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
clpB2; chaperone protein ClpB
L2_031_000G1_scaffold_521_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3058..4569
DNA (1512bp) protein (504aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A3D0_CLOBU
Band 7 protein:Flotillin {ECO:0000313|EMBL:KJZ87530.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
flotillin
L2_031_000G1_scaffold_521_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4636..5898)
DNA (1263bp) protein (421aa)
Xre family DNA-binding domain and TPR-repeat-containing protein n=3 Tax=Clostridium butyricum RepID=B1QXH5_CLOBU
TPR protein {ECO:0000313|EMBL:EEP55435.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
TPR repeat-containing protein
L2_031_000G1_scaffold_521_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5915..7222)
DNA (1308bp) protein (436aa)
Helix-turn-helix domain protein n=3 Tax=Clostridium butyricum RepID=B1QXH6_CLOBU
Xre family DNA-binding domain and TPR-repeat-containing protein {ECO:0000313|EMBL:KJZ87471.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
putative transcriptional regulator
L2_031_000G1_scaffold_521_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7472..7645)
DNA (174bp) protein (58aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QXH7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ31021.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L2_031_000G1_scaffold_521_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7736..8698)
DNA (963bp) protein (321aa)
Ribonuclease HI n=2 Tax=Clostridium butyricum RepID=B1QXH8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP55199.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L2_031_000G1_scaffold_521_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8738..9703)
DNA (966bp) protein (322aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1QXH9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP55121.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L2_031_000G1_scaffold_521_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9911..10744)
DNA (834bp) protein (278aa)
Lipoprotein n=2 Tax=Clostridium butyricum RepID=B1QXI0_CLOBU
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
YaeC family lipoprotein
L2_031_000G1_scaffold_521_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10932..11570)
DNA (639bp) protein (213aa)
D-methionine transport system permease protein MetI n=3 Tax=Clostridium butyricum RepID=B1QXI1_CLOBU
D-methionine transport system permease protein MetI {ECO:0000313|EMBL:EEP55663.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
metI; D-methionine transport system permease protein MetI
L2_031_000G1_scaffold_521_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11570..12610)
DNA (1041bp) protein (347aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
metN; methionine import ATP-binding protein MetN (EC:3.6.3.-)
Methionine import ATP-binding protein MetN n=3 Tax=Clostridium butyricum RepID=C4IDY2_CLOBU
L2_031_000G1_scaffold_521_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12953..13423)
DNA (471bp) protein (157aa)
SsrA-binding protein n=3 Tax=Clostridium butyricum RepID=C4IDY3_CLOBU
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
smpB; SsrA-binding protein SmpB
L2_031_000G1_scaffold_521_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13607..15856)
DNA (2250bp) protein (750aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
rnr; ribonuclease R (EC:3.1.13.1)
Ribonuclease R n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A3D8_CLOBU
L2_031_000G1_scaffold_521_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16168..17457)
DNA (1290bp) protein (430aa)
O-acetylhomoserine/O-acetylserine sulfhydrylase (EC:2.5.1.47)
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AE01_CLOBU
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase {ECO:0000313|EMBL:ENZ31029.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L2_031_000G1_scaffold_521_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17993..20017)
DNA (2025bp) protein (675aa)
Putative K(+)-stimulated pyrophosphate-energized sodium pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound sodium-translocating pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; Pyrophosphate-energized inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1)
Putative K(+)-stimulated pyrophosphate-energized sodium pump n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YUA0_CLOBU
L2_031_000G1_scaffold_521_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20338..20571)
DNA (234bp) protein (78aa)
Preprotein translocase, SecG subunit n=4 Tax=Clostridium butyricum RepID=B1R152_CLOBU
Preprotein translocase, SecG subunit {ECO:0000313|EMBL:ENZ31031.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
secG; preprotein translocase, SecG subunit SecG
L2_031_000G1_scaffold_521_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20772..21125)
DNA (354bp) protein (118aa)
Inner membrane protein YhaI n=5 Tax=Clostridium butyricum RepID=B1R151_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ87525.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
aminopeptidase
L2_031_000G1_scaffold_521_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21505..22797)
DNA (1293bp) protein (431aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
eno; enolase Eno (EC:4.2.1.11)
Enolase n=4 Tax=Clostridium butyricum RepID=B1R150_CLOBU
L2_031_000G1_scaffold_521_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23022..23531
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AE07_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ31034.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
putative cell wall binding protein
L2_031_000G1_scaffold_521_19
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23590..24192)
DNA (603bp) protein (201aa)
Uncharacterized protein n=5 Tax=Clostridium butyricum RepID=B1R149_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ87526.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_031_000G1_scaffold_521_20
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24318..25856)
DNA (1539bp) protein (513aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038};; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase GpmI (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=3 Tax=Clostridium butyricum RepID=B1R148_CLOBU
L2_031_000G1_scaffold_521_21
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26192..26938)
DNA (747bp) protein (249aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
Triosephosphate isomerase n=2 Tax=Clostridium butyricum RepID=M8JG73_CLOBU
tpiA; triosephosphate isomerase
L2_031_000G1_scaffold_521_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27330..28505)
DNA (1176bp) protein (392aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
Phosphoglycerate kinase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JHL5_CLOBU
pgk; phosphoglycerate kinase
L2_031_000G1_scaffold_521_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28637..28732)
DNA (96bp) protein (32aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Glyceraldehyde-3-phosphate dehydrogenase, type I n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TDS9_9CLOT
gap; glyceraldehyde-3-phosphate dehydrogenase, type I
Displaying 23 items

View Taxonomy