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L2_031_000G1_scaffold_560

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_000G1_scaffold_560_1
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(67..435)
DNA (369bp) protein (123aa)
Flagellar biosynthetic protein FliO n=9 Tax=Clostridium RepID=N9Y8A3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF26643.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
Flagellar biogenesis protein
L2_031_000G1_scaffold_560_2
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(432..1919)
DNA (1488bp) protein (496aa)
Flagellar motor switch protein FliN n=7 Tax=Clostridium RepID=N9VF71_9CLOT
Flagellar motor switch protein FliN {ECO:0000313|EMBL:ENZ67610.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
flagellar motor switch protein FliN
L2_031_000G1_scaffold_560_3
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1942..2391)
DNA (450bp) protein (150aa)
Flagellar basal-body rod protein FlgC n=9 Tax=Clostridium RepID=G5HVB0_9CLOT
Flagellar basal-body rod protein FlgC {ECO:0000256|RuleBase:RU362062}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
flagellar basal-body rod protein FlgC
L2_031_000G1_scaffold_560_4
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2410..2772)
DNA (363bp) protein (121aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9WZ03_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ67612.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
L2_031_000G1_scaffold_560_5
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2845..3924)
DNA (1080bp) protein (360aa)
Flagellar motor switch protein FliM n=6 Tax=Clostridium clostridioforme RepID=N9WP35_9CLOT
Flagellar motor switch protein FliM {ECO:0000313|EMBL:ENZ67613.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Flagellar motor switch protein
L2_031_000G1_scaffold_560_6
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3947..4903)
DNA (957bp) protein (319aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9X0Q1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ67614.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Flagellar motor protein
L2_031_000G1_scaffold_560_7
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4900..5715)
DNA (816bp) protein (272aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9VF68_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ18813.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
MotA/TolQ/ExbB proton channel
L2_031_000G1_scaffold_560_8
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5751..5951)
DNA (201bp) protein (67aa)
Uncharacterized protein n=8 Tax=Clostridium clostridioforme RepID=N9VFV2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ67616.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Uncharacterized protein, possibly involved in motility
L2_031_000G1_scaffold_560_9
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6032..6958)
DNA (927bp) protein (309aa)
Flagellar hook-basal body protein n=6 Tax=Clostridium clostridioforme RepID=N9WYZ5_9CLOT
Flagellar hook-basal body protein {ECO:0000313|EMBL:ENZ67617.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
fagellar hook-basal body proteins
L2_031_000G1_scaffold_560_10
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7027..7404)
DNA (378bp) protein (126aa)
Flagellar operon protein n=8 Tax=Clostridium RepID=N9WP31_9CLOT
Flagellar operon protein {ECO:0000313|EMBL:ENZ67618.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
flagellar operon protein
L2_031_000G1_scaffold_560_11
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7437..8036)
DNA (600bp) protein (200aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=N9X0P7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ67619.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Flagellar hook capping protein
L2_031_000G1_scaffold_560_12
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8050..9240)
DNA (1191bp) protein (397aa)
Uncharacterized protein n=6 Tax=Clostridium clostridioforme RepID=N9VF64_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ67620.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L2_031_000G1_scaffold_560_13
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9300..9767)
DNA (468bp) protein (156aa)
Flagellar export protein FliJ n=6 Tax=Clostridium clostridioforme RepID=N9VFU7_9CLOT
Flagellar export protein FliJ {ECO:0000313|EMBL:ENZ67621.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Flagellar FliJ protein.
L2_031_000G1_scaffold_560_14
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9815..11116)
DNA (1302bp) protein (434aa)
type III secretion system ATPase, FliI/YscN (EC:3.6.3.14 3.6.3.15)
ATPase FliI/YscN family protein n=6 Tax=Clostridium clostridioforme RepID=N9WYY9_9CLOT
ATPase FliI/YscN family protein {ECO:0000313|EMBL:ENZ67622.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
L2_031_000G1_scaffold_560_15
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11124..11969)
DNA (846bp) protein (282aa)
Uncharacterized protein n=8 Tax=Clostridium clostridioforme RepID=N9WP27_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ67623.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L2_031_000G1_scaffold_560_16
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11950..13035)
DNA (1086bp) protein (362aa)
Flagellar motor switch protein FliG n=7 Tax=Clostridium RepID=N9X0P3_9CLOT
Flagellar motor switch protein FliG {ECO:0000313|EMBL:ENZ67624.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
flagellar motor switch protein FliG
L2_031_000G1_scaffold_560_17
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12998..14683)
DNA (1686bp) protein (562aa)
Uncharacterized protein n=6 Tax=Clostridium clostridioforme RepID=N9VF59_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ67625.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Flagellar biosynthesis/type III secretory pathway lipoprotein
L2_031_000G1_scaffold_560_18
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14726..15046)
DNA (321bp) protein (107aa)
Flagellar hook-basal body complex protein FliE n=9 Tax=Clostridium RepID=G5HV95_9CLOT
Flagellar hook-basal body complex protein FliE {ECO:0000256|HAMAP-Rule:MF_00724, ECO:0000256|SAAS:SAAS00116622}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
flagellar hook-basal body complex protein FliE
L2_031_000G1_scaffold_560_19
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15100..15489)
DNA (390bp) protein (130aa)
Flagellar basal body rod protein FlgB n=9 Tax=Clostridium RepID=G5HV94_9CLOT
Flagellar basal body rod protein FlgB {ECO:0000256|PIRNR:PIRNR002889}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
flagellar basal-body rod protein FlgB
L2_031_000G1_scaffold_560_20
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15526..15705)
DNA (180bp) protein (60aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9WP24_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ67628.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
L2_031_000G1_scaffold_560_21
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16120..16476
DNA (357bp) protein (119aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9X0P1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ67629.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L2_031_000G1_scaffold_560_22
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17184..17630)
DNA (447bp) protein (149aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9VF57_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ67630.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
L2_031_000G1_scaffold_560_23
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17627..18535)
DNA (909bp) protein (303aa)
S-adenosylmethionine synthase {ECO:0000256|RuleBase:RU000541}; EC=2.5.1.6 {ECO:0000256|RuleBase:RU000541};; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
methionine adenosyltransferase (EC:2.5.1.6)
S-adenosylmethionine synthase n=6 Tax=Clostridium clostridioforme RepID=N9VFT9_9CLOT
L2_031_000G1_scaffold_560_24
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18566..19096)
DNA (531bp) protein (177aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9WYX6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ67632.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
immunoglobulin-binding regulator B
L2_031_000G1_scaffold_560_25
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19071..20417)
DNA (1347bp) protein (449aa)
Uncharacterized protein n=6 Tax=Clostridium clostridioforme RepID=N9WP21_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ67633.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
phosphoadenosine phosphosulfate reductase
L2_031_000G1_scaffold_560_26
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21021..21707
DNA (687bp) protein (229aa)
Two-component system response regulator n=9 Tax=Clostridium RepID=N9X0N7_9CLOT
Two-component system response regulator {ECO:0000313|EMBL:ENZ67634.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L2_031_000G1_scaffold_560_27
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21716..22753
DNA (1038bp) protein (346aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Uncharacterized protein n=6 Tax=Clostridium clostridioforme RepID=N9VF53_9CLOT
Signal transduction histidine kinase
L2_031_000G1_scaffold_560_28
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22826..23509
DNA (684bp) protein (228aa)
ABC transporter ATP-binding protein n=7 Tax=Clostridium RepID=N9VFT5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF26616.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
macrolide export ATP-binding/permease MacB
L2_031_000G1_scaffold_560_29
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23506..25320
DNA (1815bp) protein (605aa)
ABC transporter permease n=6 Tax=Clostridium clostridioforme RepID=N9WYX1_9CLOT
ABC transporter permease {ECO:0000313|EMBL:ENZ67637.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
ABC transporter permease
L2_031_000G1_scaffold_560_30
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25607..25816)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K6W4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN42105.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
Displaying items 1-30 of 32 in total

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