ggKbase home page

L2_031_000G1_scaffold_569

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_000G1_scaffold_569_1
unknown

Not on your lists

comp(3..89)
DNA (87bp) protein (29aa)

This feature has no annotations

L2_031_000G1_scaffold_569_2
unknown

Not on your lists

450..1061
DNA (612bp) protein (204aa)

This feature has no annotations

L2_031_000G1_scaffold_569_3
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1018..2307
DNA (1290bp) protein (430aa)
Methyl-accepting chemotaxis protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CAA9_9CLOT
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:EOC99269.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
methyl-accepting chemotaxis sensory transducer with Cache sensor
L2_031_000G1_scaffold_569_4
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2504..3670
DNA (1167bp) protein (389aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TV10_9CLOT
N-acetylglucosamine-6-phosphate deacetylase
L2_031_000G1_scaffold_569_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3825..6590
DNA (2766bp) protein (922aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A1L3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30383.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NtrC family Transcriptional regulator, ATPase domain
L2_031_000G1_scaffold_569_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6797..7102
DNA (306bp) protein (102aa)
PTS system, Lactose/Cellobiose specific IIB subunit n=2 Tax=Clostridium butyricum RepID=M8K221_CLOBU
PTS sugar transporter {ECO:0000313|EMBL:KHD14281.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
PTS system, lactose/cellobiose-specific family, IIB component
L2_031_000G1_scaffold_569_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7149..7454
DNA (306bp) protein (102aa)
Lichenan-specific phosphotransferase enzyme iia component n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KA89_CLOBU
PTS cellobiose transporter subunit IIA {ECO:0000313|EMBL:KHD14280.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
PTS system lactose/cellobiose-specific transporter subunit IIA
L2_031_000G1_scaffold_569_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7493..8386
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YRZ9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30386.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
ATPase family protein
L2_031_000G1_scaffold_569_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8399..9490
DNA (1092bp) protein (364aa)
Outer surface protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JGN8_CLOBU
Outer surface protein {ECO:0000313|EMBL:KHD14278.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
outer surface protein
L2_031_000G1_scaffold_569_10
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9515..10807
DNA (1293bp) protein (431aa)
Lichenan permease iic component n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JFC2_CLOBU
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
PTS system lactose/cellobiose family transporter subunit IIC
L2_031_000G1_scaffold_569_11
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10913..11638
DNA (726bp) protein (242aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029496};; GlcN6P deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; Glucosamine-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01241}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
glucosamine-6-phosphate deaminase n=1 Tax=Clostridium beijerinckii RepID=UPI000303FBA9
glucosamine-6-phosphate isomerase
L2_031_000G1_scaffold_569_12
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11799..12380
DNA (582bp) protein (194aa)
Zinc dependent phospholipase C n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MLN0_CLOSA
zinc dependent phospholipase C
Zinc dependent phospholipase C {ECO:0000313|EMBL:AGX41403.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_031_000G1_scaffold_569_13
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12528..12743)
DNA (216bp) protein (72aa)
YvrJ protein family n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MHL1_9CLOT
YvrJ protein family
YvrJ protein family {ECO:0000313|EMBL:AGF57409.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_031_000G1_scaffold_569_14
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12900..13424)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LVS9_CLOB8
Uncharacterized protein {ECO:0000313|EMBL:KJZ82851.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
hypothetical protein
L2_031_000G1_scaffold_569_15
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13895..14728
DNA (834bp) protein (278aa)
Putative transcriptional regulator, AraC family n=1 Tax=Clostridium sp. D5 RepID=F0Z0H9_9CLOT
Putative transcriptional regulator, AraC family {ECO:0000313|EMBL:EGB92600.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
AraC family transcriptional regulator
L2_031_000G1_scaffold_569_16
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14777..15184
DNA (408bp) protein (136aa)
Glyoxalase family protein n=1 Tax=Clostridium sp. D5 RepID=F0Z0H8_9CLOT
Glyoxalase family protein {ECO:0000313|EMBL:EGB92599.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
glyoxalase family protein
L2_031_000G1_scaffold_569_17
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15340..15582
DNA (243bp) protein (81aa)
hypothetical protein n=1 Tax=Clostridium beijerinckii RepID=UPI00031F9878
Uncharacterized protein {ECO:0000313|EMBL:EKQ57738.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
L2_031_000G1_scaffold_569_18
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15710..17608)
DNA (1899bp) protein (633aa)
HTH domain protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CWF4_9CLOT
HTH domain protein {ECO:0000313|EMBL:EEG56581.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
PTS operon transcription antiterminator
L2_031_000G1_scaffold_569_19
Lactobacillus kullabergensis, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17853..18164
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CWF6_9CLOT
PTS Lac IIB {ECO:0000313|EMBL:KJY58216.1}; TaxID=1218493 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus kullabergensis.;"
PTS system lactose/cellobiose-specific transporter subunit IIB
L2_031_000G1_scaffold_569_20
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18179..19453
DNA (1275bp) protein (425aa)
PTS system, lactose/cellobiose family IIC component n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CWF7_9CLOT
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
celB.3; PTS system cellobiose-specific transporter subunit IIC
L2_031_000G1_scaffold_569_21
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19466..19801
DNA (336bp) protein (112aa)
PTS system, Lactose/Cellobiose specific IIA subunit n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CWF8_9CLOT
PTS system, Lactose/Cellobiose specific IIA subunit {ECO:0000313|EMBL:EEG56585.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
ptcA; putative PTS system, cellobiose-specific IIA component
L2_031_000G1_scaffold_569_22
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19806..21326
DNA (1521bp) protein (507aa)
bglH5; 6-phospho-beta-glucosidase (EC:3.2.1.21)
Glycosyl hydrolase, family 1 n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CWF9_9CLOT
Glycosyl hydrolase, family 1 {ECO:0000313|EMBL:EEG56586.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
L2_031_000G1_scaffold_569_23
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21825..22451
DNA (627bp) protein (209aa)
Redox-sensing transcriptional repressor Rex n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MLF7_CLOSA
rex; redox-sensing transcriptional repressor Rex
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_031_000G1_scaffold_569_24
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22760..23545
DNA (786bp) protein (262aa)
Cadmium-transporting ATPase {ECO:0000313|EMBL:KJZ97304.1}; EC=3.6.3.3 {ECO:0000313|EMBL:KJZ97304.1};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
crt; 3-hydroxybutyryl-CoA dehydratase (EC:4.2.1.55)
3-hydroxybutyryl-CoA dehydratase n=4 Tax=Clostridium butyricum RepID=B1R078_CLOBU
L2_031_000G1_scaffold_569_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23626..24765
DNA (1140bp) protein (380aa)
bcd1; acyl-CoA dehydrogenase, short-chain specific (EC:1.3.8.1)
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:EEP55355.1}; EC=1.3.8.1 {ECO:0000313|EMBL:EEP55355.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
Acyl-coa dehydrogenase, short-chain specific n=3 Tax=Clostridium butyricum RepID=B1R079_CLOBU
L2_031_000G1_scaffold_569_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24779..25558
DNA (780bp) protein (260aa)
Electron transfer flavoprotein, beta subunit n=2 Tax=Clostridium butyricum RepID=M8J6F6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30396.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
electron transfer flavoprotein, alpha/beta-subunit-like protein
L2_031_000G1_scaffold_569_27
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25581..26588
DNA (1008bp) protein (336aa)
Electron transfer flavoprotein alpha-subunit n=1 Tax=Clostridium saccharobutylicum RepID=B2RGG6_CLOSA
Electron transfer flavoprotein alpha-subunit {ECO:0000313|EMBL:CAQ53137.1}; TaxID=169679 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum.;"
fixB2; protein FixB
L2_031_000G1_scaffold_569_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26811..27659
DNA (849bp) protein (283aa)
hbd1; 3-hydroxybutyryl-CoA dehydrogenase Hbd (EC:1.1.1.157)
Beta-hydroxybutyryl-CoA-dehydrogenase n=4 Tax=Clostridium RepID=B3VSA2_CLOBU
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:ENZ30398.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L2_031_000G1_scaffold_569_29
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27769..28773
DNA (1005bp) protein (335aa)
Iron-containing alcohol dehydrogenase n=2 Tax=Clostridium beijerinckii RepID=A6LVG8_CLOB8
iron-containing alcohol dehydrogenase
Alcohol dehydrogenase {ECO:0000313|EMBL:AAT38119.1}; Iron-containing alcohol dehydrogenase {ECO:0000313|EMBL:AJG99049.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
Displaying 29 items

View Taxonomy