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L2_031_000G1_scaffold_586

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_000G1_scaffold_586_1
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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258..2693
DNA (2436bp) protein (812aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
phenylalanyl-tRNA synthetase subunit beta n=1 Tax=Clostridium beijerinckii RepID=UPI0003101236
pheT; phenylalanyl-tRNA synthetase subunit beta
L2_031_000G1_scaffold_586_2
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2993..3421
DNA (429bp) protein (143aa)
Protein MraZ n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TVY5_9CLOT
cell division protein MraZ
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
L2_031_000G1_scaffold_586_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3434..4366
DNA (933bp) protein (311aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
rsmH; ribosomal RNA small subunit methyltransferase H (EC:2.1.1.199)
Ribosomal RNA small subunit methyltransferase H n=4 Tax=Clostridium butyricum RepID=B1QW60_CLOBU
L2_031_000G1_scaffold_586_4
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4421..4933
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G1D4_CLOPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETD69467.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
L2_031_000G1_scaffold_586_5
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5050..7257
DNA (2208bp) protein (736aa)
Stage V sporulation protein D n=2 Tax=Clostridium RepID=A6LTS2_CLOB8
Stage V sporulation protein D {ECO:0000313|EMBL:ETD69466.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
stage V sporulation protein D
L2_031_000G1_scaffold_586_6
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7339..8796
DNA (1458bp) protein (486aa)
murE2; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE (EC:6.3.2.13)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; Meso-diaminopimelate-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MT41_CLOSA
L2_031_000G1_scaffold_586_7
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8854..10230
DNA (1377bp) protein (459aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Clostridium sp. DL-VIII RepID=G7M2T0_9CLOT
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase
L2_031_000G1_scaffold_586_8
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10248..11222
DNA (975bp) protein (325aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase MraY (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00038}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MVN2_CLOSA
L2_031_000G1_scaffold_586_9
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11244..12353
DNA (1110bp) protein (370aa)
Stage V sporulation protein E n=1 Tax=Clostridium sp. DL-VIII RepID=G7M2T2_9CLOT
Stage V sporulation protein E {ECO:0000313|EMBL:EHI99584.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
spoVE2; stage V sporulation protein E
L2_031_000G1_scaffold_586_10
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12521..13273
DNA (753bp) protein (251aa)
Cell division protein DivIB n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MSB0_CLOSA
divIB; cell division protein DivIB
Cell division protein DivIB {ECO:0000313|EMBL:AGX43699.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_031_000G1_scaffold_586_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13371..14099
DNA (729bp) protein (243aa)
Division initiation protein n=4 Tax=Clostridium butyricum RepID=B1QW51_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ34279.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L2_031_000G1_scaffold_586_12
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14112..14489
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MW70_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY83186.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_031_000G1_scaffold_586_13
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14486..15229
DNA (744bp) protein (248aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A6LTT1_CLOB8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR33761.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L2_031_000G1_scaffold_586_14
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15325..15987
DNA (663bp) protein (221aa)
Pyridoxal phosphate enzyme, YggS family n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MSX5_CLOSA
pyridoxal phosphate enzyme, YggS family
Pyridoxal phosphate enzyme, YggS family {ECO:0000313|EMBL:AGX43695.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_031_000G1_scaffold_586_15
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16005..16460
DNA (456bp) protein (152aa)
Cell division protein SepF n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MSA5_CLOSA
sepF; cell division protein SepF
Cell division protein SepF {ECO:0000256|HAMAP-Rule:MF_01197}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_031_000G1_scaffold_586_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16469..16750
DNA (282bp) protein (94aa)
Yggt family protein n=2 Tax=Clostridium butyricum RepID=M8JK95_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KHD16894.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
YGGT family
L2_031_000G1_scaffold_586_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16744..17508
DNA (765bp) protein (255aa)
S4 domain protein n=2 Tax=Clostridium butyricum RepID=B1QW46_CLOBU
RNA-binding protein S4 {ECO:0000313|EMBL:KHD16895.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
RNA-binding S4 domain-containing protein
L2_031_000G1_scaffold_586_18
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17522..18205
DNA (684bp) protein (228aa)
DivIVA domain containing protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TAH1_9CLOT
DivIVA domain containing protein {ECO:0000313|EMBL:EKQ56888.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
DivIVA family protein
L2_031_000G1_scaffold_586_19
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18394..19305
DNA (912bp) protein (304aa)
ylyB; RNA pseudouridine synthase YlyB (EC:5.4.99.-)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
RNA pseudouridine synthase YlyB n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MSX0_CLOSA
L2_031_000G1_scaffold_586_20
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19298..19867
DNA (570bp) protein (190aa)
pyrR; bifunctional protein PyrR (EC:2.4.2.9)
Bifunctional protein PyrR n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MSA2_CLOSA
Bifunctional protein PyrR {ECO:0000256|HAMAP-Rule:MF_01219}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_031_000G1_scaffold_586_21
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19896..21059
DNA (1164bp) protein (388aa)
rRNA (Guanine-N(2)-)-methyltransferase n=1 Tax=Clostridium sp. DL-VIII RepID=G7M2U6_9CLOT
rRNA (Guanine-N(2)-)-methyltransferase {ECO:0000313|EMBL:EHI99598.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
RNA methylase
L2_031_000G1_scaffold_586_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21275..22111
DNA (837bp) protein (279aa)
Transcriptional regulator, RpiR family n=3 Tax=Clostridium butyricum RepID=B1QW41_CLOBU
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:ETI87807.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
transcriptional regulator, RpiR family
L2_031_000G1_scaffold_586_23
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22183..23913)
DNA (1731bp) protein (577aa)
Protein YloA n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MVL6_CLOSA
yloA; protein YloA
Protein YloA {ECO:0000313|EMBL:AGX43686.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_031_000G1_scaffold_586_24
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24055..24972
DNA (918bp) protein (306aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
Diaminopimelate epimerase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TVX1_9CLOT
dapF; diaminopimelate epimerase
L2_031_000G1_scaffold_586_25
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25027..26040
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MS98_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX43684.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Displaying 25 items

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