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L2_031_000G1_scaffold_605

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_000G1_scaffold_605_1
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..136
DNA (135bp) protein (45aa)
Excisionase from transposon Tn916 n=19 Tax=Bacteria RepID=D4MW18_9FIRM
Excisionase from transposon Tn916.
DNA binding domain, excisionase family {ECO:0000313|EMBL:EEA84070.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L2_031_000G1_scaffold_605_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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216..1409
DNA (1194bp) protein (398aa)
Site-specific recombinase, phage integrase family n=3 Tax=Firmicutes RepID=E4LT10_9CLOT
Transposase Int-Tn {ECO:0000313|EMBL:EQJ51502.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Site-specific recombinase XerD
L2_031_000G1_scaffold_605_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1633..2805)
DNA (1173bp) protein (391aa)
Alcohol dehydrogenase, iron-dependent n=4 Tax=Firmicutes RepID=E4LT11_9CLOT
Iron-containing alcohol dehydrogenase family protein {ECO:0000313|EMBL:EQJ51501.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
iron-containing alcohol dehydrogenase
L2_031_000G1_scaffold_605_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2903..4279)
DNA (1377bp) protein (459aa)
Transporter n=6 Tax=Firmicutes RepID=E4LT12_9CLOT
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
SNF family Na+-dependent transporter
L2_031_000G1_scaffold_605_5
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(4589..5218)
DNA (630bp) protein (210aa)
HAD hydrolase, family IA, variant 1 n=5 Tax=Firmicutes RepID=E4LT13_9CLOT
HAD hydrolase family IIIA {ECO:0000313|EMBL:CDC86235.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
phosphatase
L2_031_000G1_scaffold_605_6
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(5476..7404)
DNA (1929bp) protein (643aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1BHE9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO20214.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
NADH:flavin oxidoreductase/NADH oxidase
L2_031_000G1_scaffold_605_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7416..9344)
DNA (1929bp) protein (643aa)
Flavin oxidoreductase / NADH oxidase family protein n=1 Tax=Clostridium difficile P28 RepID=T4N835_CLODI
Flavin oxidoreductase / NADH oxidase family protein {ECO:0000313|EMBL:EQJ51497.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
NADH:flavin oxidoreductase
L2_031_000G1_scaffold_605_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9422..10603)
DNA (1182bp) protein (394aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=H1BHE7_9FIRM
Bacterial regulatory helix-turn-helix s, AraC family protein {ECO:0000313|EMBL:EQJ51496.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
DNA-binding domain-containing protein
L2_031_000G1_scaffold_605_9
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10781..11692)
DNA (912bp) protein (304aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=E4LT17_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC86231.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
dTDP-glucose pyrophosphorylase
L2_031_000G1_scaffold_605_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11841..12293)
DNA (453bp) protein (151aa)
DNA-binding helix-turn-helix protein n=5 Tax=Firmicutes RepID=E4LT18_9CLOT
Helix-turn-helix family protein {ECO:0000313|EMBL:EQJ51494.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L2_031_000G1_scaffold_605_11
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12404..13021)
DNA (618bp) protein (206aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LT19_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO20209.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
hypothetical protein
L2_031_000G1_scaffold_605_12
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13185..13784)
DNA (600bp) protein (200aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=H1AVN5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC86228.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
TetR family transcriptional regulator
L2_031_000G1_scaffold_605_13
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13916..15910
DNA (1995bp) protein (665aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=H1AVN6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC86227.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
NADH:flavin oxidoreductase
L2_031_000G1_scaffold_605_14
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16656..17903)
DNA (1248bp) protein (416aa)
HDIG domain protein n=3 Tax=Firmicutes RepID=E4LT23_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC86226.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
metal dependent phosphohydrolase
L2_031_000G1_scaffold_605_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18009..20174)
DNA (2166bp) protein (722aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LT24_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQJ51488.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
X-X-X-Leu-X-X-Gly heptad repeats
L2_031_000G1_scaffold_605_16
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20188..22260)
DNA (2073bp) protein (691aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=E4LT25_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR38000.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Predicted exporters of the RND superfamily
L2_031_000G1_scaffold_605_17
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22282..22878)
DNA (597bp) protein (199aa)
Transcriptional regulator, TetR family n=4 Tax=Firmicutes RepID=E4LT26_9CLOT
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EFR38030.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
TetR family transcriptional regulator
L2_031_000G1_scaffold_605_18
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

23317..23466
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1BHD7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO20202.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
L2_031_000G1_scaffold_605_19
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(24320..25690)
DNA (1371bp) protein (457aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium CAG:64 RepID=R6VVF8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO20201.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
Listeria/Bacterioides repeat
Displaying 19 items

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