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L2_031_000G1_scaffold_631

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_000G1_scaffold_631_1
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..975
DNA (975bp) protein (325aa)
Glycerol dehydrogenase {ECO:0000313|EMBL:EHJ01836.1}; EC=1.1.1.6 {ECO:0000313|EMBL:EHJ01836.1};; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
gldA; glycerol dehydrogenase GldA (EC:1.1.1.6)
Glycerol dehydrogenase n=1 Tax=Clostridium sp. DL-VIII RepID=G7MA70_9CLOT
L2_031_000G1_scaffold_631_2
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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968..2155
DNA (1188bp) protein (396aa)
Aminotransferase class I and II n=1 Tax=Clostridium sp. DL-VIII RepID=G7MA69_9CLOT
Aminotransferase class I and II {ECO:0000313|EMBL:EHJ01835.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
aspartate/tyrosine/aromatic aminotransferase
L2_031_000G1_scaffold_631_3
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2139..3200
DNA (1062bp) protein (354aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
Phosphonate-transporting ATPase n=1 Tax=Clostridium sp. DL-VIII RepID=G7MA68_9CLOT
ABC transporter related protein
L2_031_000G1_scaffold_631_4
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3201..3878
DNA (678bp) protein (226aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Clostridium sp. DL-VIII RepID=G7MA67_9CLOT
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:EHJ01833.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
D-methionine transport system permease MetI
L2_031_000G1_scaffold_631_5
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3894..4763
DNA (870bp) protein (290aa)
Lipoprotein n=1 Tax=Clostridium sp. DL-VIII RepID=G7MA66_9CLOT
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; Flags: Precursor;; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
lipoprotein, YaeC family
L2_031_000G1_scaffold_631_6
Lachnoanaerobaculum saburreum, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4865..5284)
DNA (420bp) protein (140aa)
TOBE domain protein n=1 Tax=Lachnoanaerobaculum saburreum DSM 3986 RepID=E6LMY6_9FIRM
TOBE domain protein {ECO:0000313|EMBL:EFU76805.1}; TaxID=887325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum saburreum DSM 3986.;"
MopI; molybdopterin-binding protein
L2_031_000G1_scaffold_631_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5327..6376)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A718_CLOBU
Molybdenum transport ATP-binding protein ModC {ECO:0000313|EMBL:KJZ84211.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
putrescine transport ATP-binding protein PotG
L2_031_000G1_scaffold_631_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6379..7059)
DNA (681bp) protein (227aa)
Molybdate ABC transporter, permease protein n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IC57_CLOBU
Molybdate ABC transporter, permease protein {ECO:0000313|EMBL:EEP56398.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
modB; molybdate ABC transporter, permease protein
L2_031_000G1_scaffold_631_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7090..7926)
DNA (837bp) protein (279aa)
UPI0003D65EB4 related cluster n=1 Tax=unknown RepID=UPI0003D65EB4
Molybdate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KHD14037.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
modA; molybdate ABC transporter, periplasmic molybdate-binding protein
L2_031_000G1_scaffold_631_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8227..8835
DNA (609bp) protein (203aa)
Fe-only nitrogenase accessory protein AnfO n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YXT9_CLOBU
AnfO protein, required for Mo-and V-independent nitrogenase {ECO:0000313|EMBL:KJZ84128.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_031_000G1_scaffold_631_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8849..9781
DNA (933bp) protein (311aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1QU15_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP56349.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L2_031_000G1_scaffold_631_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9809..10768
DNA (960bp) protein (320aa)
Excisionase family DNA binding domain-containing protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A713_CLOBU
DNA binding domain, excisionase family {ECO:0000313|EMBL:EEP56139.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
molybdate-binding protein
L2_031_000G1_scaffold_631_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11104..11925
DNA (822bp) protein (274aa)
Nitrogenase iron protein {ECO:0000256|HAMAP-Rule:MF_00533}; EC=1.18.6.1 {ECO:0000256|HAMAP-Rule:MF_00533};; Nitrogenase Fe protein {ECO:0000256|HAMAP-Rule:MF_00533}; Nitrogenase component II {ECO:0000256|HAMAP-Rule:MF_00533}; Nitrogenase reductase {ECO:0000256|HAMAP-Rule:MF_00533}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Nitrogenase iron protein n=3 Tax=Clostridium butyricum RepID=C4IC62_CLOBU
nitrogenase iron protein
L2_031_000G1_scaffold_631_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11945..12271
DNA (327bp) protein (109aa)
Nitrogen regulatory protein P-II n=4 Tax=Clostridium butyricum RepID=B1QUW3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ32196.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
nitrogen regulatory protein P-II
L2_031_000G1_scaffold_631_15
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12295..12675
DNA (381bp) protein (127aa)
Nitrogen regulatory protein P-II n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J4P9_CLOBU
nitrogen regulatory protein P-II
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:CDM70240.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L2_031_000G1_scaffold_631_16
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12693..14282
DNA (1590bp) protein (530aa)
nifD; Nitrogenase molybdenum-iron protein alpha chain (EC:1.18.6.1)
Nitrogenase protein alpha chain {ECO:0000256|RuleBase:RU004022}; EC=1.18.6.1 {ECO:0000256|RuleBase:RU004022, ECO:0000313|EMBL:CDM70239.1};; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
Nitrogenase protein alpha chain n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K8F3_CLOBU
L2_031_000G1_scaffold_631_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14287..15651
DNA (1365bp) protein (455aa)
nifK; Nitrogenase molybdenum-iron protein beta chain (EC:1.18.6.1)
Nitrogenase molybdenum-iron protein beta chain (Nitrogenase component I) n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K0C9_CLOBU
Nitrogenase molybdenum-iron protein subunit beta {ECO:0000313|EMBL:KHD14063.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
L2_031_000G1_scaffold_631_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15877..17214
DNA (1338bp) protein (446aa)
UPI0003D5EB3C related cluster n=1 Tax=unknown RepID=UPI0003D5EB3C
Nitrogenase MoFe cofactor biosynthesis protein NifE {ECO:0000313|EMBL:ETI87612.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
nifE; Nitrogenase iron-molybdenum cofactor biosynthesis protein NifE
L2_031_000G1_scaffold_631_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17233..19890
DNA (2658bp) protein (886aa)
Nitrogenase cofactor biosynthesis protein NifB n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YX77_CLOBU
Nitrogenase cofactor biosynthesis protein NifB {ECO:0000313|EMBL:ENZ32191.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NifN-B
L2_031_000G1_scaffold_631_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19901..20638
DNA (738bp) protein (246aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
UPI0003D63C68 related cluster n=1 Tax=unknown RepID=UPI0003D63C68
peptidil-prolyl cis-trans isomerase
L2_031_000G1_scaffold_631_21
Clostridium tyrobutyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20717..21400
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Clostridium tyrobutyricum RepID=UPI0002E25A49
Ni2+-binding GTPase involved in regulation of expression and maturation of hydrogenase {ECO:0000313|EMBL:CDL90648.1}; TaxID=1408889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tyrobutyricum DIVETGP.;"
nickel binding GTPase
L2_031_000G1_scaffold_631_22
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21468..22259
DNA (792bp) protein (264aa)
ABC transporter ATPase n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EIG1_CLOPA
ABC-type antimicrobial peptide transport system, ATPase component
ABC transporter related {ECO:0000313|EMBL:ABW17786.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain OhILAs) (Clostridium oremlandii; (strain OhILAs)).;"
L2_031_000G1_scaffold_631_23
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22265..23215
DNA (951bp) protein (317aa)
Putative uncharacterized protein n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1TCD3_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGD48048.1}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens DSM 2782.;"
extracellular substrate-binding protein
L2_031_000G1_scaffold_631_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23243..24172
DNA (930bp) protein (310aa)
UPI0003D655C2 related cluster n=1 Tax=unknown RepID=UPI0003D655C2
Homocitrate synthase, omega subunit {ECO:0000313|EMBL:ETI87609.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
isopropylmalate/homocitrate/citramalate synthase-like protein
L2_031_000G1_scaffold_631_25
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24159..24710
DNA (552bp) protein (184aa)
Homocitrate synthase {ECO:0000313|EMBL:AJG98769.1}; EC=2.3.3.14 {ECO:0000313|EMBL:AJG98769.1};; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
Homocitrate synthase n=1 Tax=Clostridium sp. DL-VIII RepID=G7M360_9CLOT
homocitrate synthase
Displaying 25 items

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