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L2_031_000G1_scaffold_643

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_000G1_scaffold_643_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..145
-----------------
DNA (144bp)
protein (48aa)
UPI0003D67350 related cluster n=1 Tax=unknown RepID=UPI0003D67350
Uncharacterized protein {ECO:0000313|EMBL:ENZ30779.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L2_031_000G1_scaffold_643_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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754..2604
-----------------
DNA (1851bp)
protein (617aa)
Choline/ethanolamine kinase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JDL5_CLOBU
Choline kinase {ECO:0000313|EMBL:KHD15346.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
licA; protein LicA
L2_031_000G1_scaffold_643_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2796..3494
-----------------
DNA (699bp)
protein (233aa)
Cholinephosphate cytidylyltransferase {ECO:0000313|EMBL:KJZ85104.1}; EC=2.7.7.15 {ECO:0000313|EMBL:KJZ85104.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Nucleotidyl transferase family protein n=2 Tax=Clostridium butyricum RepID=B1QUF3_CLOBU
phosphocholine cytidylyltransferase involved in choline phosphorylation for cell surface LPS epitopes
L2_031_000G1_scaffold_643_4

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comp(3795..4505)
-----------------
DNA (711bp)
protein (237aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AGC0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ETJ16694.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_031_000G1_scaffold_643_5

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comp(4487..5110)
-----------------
DNA (624bp)
protein (208aa)
Transcriptional regulator, TetR family n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JMS9_CLOBU
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ETJ16693.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
transcriptional regulator, TetR family
L2_031_000G1_scaffold_643_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5552..7009
-----------------
DNA (1458bp)
protein (486aa)
Polysaccharide biosynthesis protein n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4ILJ5_CLOBU
Membrane protein involved in the export of O-antigen, teichoic acid lipoteichoic acid {ECO:0000313|EMBL:KJZ85091.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
polysaccharide biosynthesis protein
L2_031_000G1_scaffold_643_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7210..8298
-----------------
DNA (1089bp)
protein (363aa)
Surface protein PspC n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JDL8_CLOBU
Choline binding protein PcpA {ECO:0000313|EMBL:KJZ85095.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
collagenolytic protease
L2_031_000G1_scaffold_643_8
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8475..8762)
-----------------
DNA (288bp)
protein (96aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1QVT9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ92478.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
L2_031_000G1_scaffold_643_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9337..12837
-----------------
DNA (3501bp)
protein (1167aa)
malS; alpha-amylase MalS (EC:3.2.1.1)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ATQ7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35427.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L2_031_000G1_scaffold_643_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12900..13727)
-----------------
DNA (828bp)
protein (276aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AGC5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35428.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Transcriptional regulators
L2_031_000G1_scaffold_643_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13788..14675)
-----------------
DNA (888bp)
protein (296aa)
Transcriptional regulator/sugar kinase (EC:2.7.1.60)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ARN7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35429.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L2_031_000G1_scaffold_643_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14827..15276)
-----------------
DNA (450bp)
protein (150aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JDM3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35430.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L2_031_000G1_scaffold_643_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15316..16815)
-----------------
DNA (1500bp)
protein (500aa)
Sodium/solute symporter family protein n=3 Tax=Clostridium butyricum RepID=B1QVU5_CLOBU
Solute:sodium symporter (SSS) family transporter {ECO:0000313|EMBL:ENZ35431.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Na+/proline symporter
L2_031_000G1_scaffold_643_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17008..17895)
-----------------
DNA (888bp)
protein (296aa)
N-acetylneuraminate lyase {ECO:0000256|HAMAP-Rule:MF_01237, ECO:0000256|SAAS:SAAS00021647}; Short=NAL {ECO:0000256|HAMAP-Rule:MF_01237};; Short=Neu5Ac lyase {ECO:0000256|HAMAP-Rule:MF_01237};; EC=4.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01237, ECO:0000256|SAAS:SAAS00021647};; N-acetylneuraminate pyruvate-lyase {ECO:0000256|HAMAP-Rule:MF_01237}; N-acetylneuraminic acid aldolase {ECO:0000256|HAMAP-Rule:MF_01237}; Sialate lyase {ECO:0000256|HAMAP-Rule:MF_01237}; Sialic acid aldolase {ECO:0000256|HAMAP-Rule:MF_01237}; Sialic acid lyase {ECO:0000256|HAMAP-Rule:MF_01237}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
N-acetylneuraminate lyase n=3 Tax=Clostridium butyricum RepID=B1QVU6_CLOBU
nanA; N-acetylneuraminate lyase
L2_031_000G1_scaffold_643_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17955..18650)
-----------------
DNA (696bp)
protein (232aa)
Putative N-acetylmannosamine-6-phosphate 2-epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; EC=5.1.3.9 {ECO:0000256|HAMAP-Rule:MF_01235};; ManNAc-6-P epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Putative N-acetylmannosamine-6-phosphate epimerase (EC:5.1.3.9)
Putative N-acetylmannosamine-6-phosphate 2-epimerase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AGD0_CLOBU
L2_031_000G1_scaffold_643_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19088..20116
-----------------
DNA (1029bp)
protein (343aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ARP1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35434.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
permease of the drug/metabolite transporter (DMT) superfamily
L2_031_000G1_scaffold_643_17
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20911..22266
-----------------
DNA (1356bp)
protein (452aa)
alpha-galactosidase/6-phospho-beta-glucosidase, family 4 of glycosyl hydrolase (EC:3.2.1.86)
6-phospho-beta-glucosidase (Cellobiose-6-phosphatehydrolase) n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KHL7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ92493.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
L2_031_000G1_scaffold_643_18
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22735..24207
-----------------
DNA (1473bp)
protein (491aa)
6-phospho-beta-glucosidase BglA n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K9C3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85100.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
glycoside hydrolase family protein
Displaying 18 items

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