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L2_031_000G1_scaffold_658

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_000G1_scaffold_658_1
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(100..1260)
DNA (1161bp) protein (387aa)
diguanylate kinase signaling protein (EC:2.7.7.65)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZH70_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD45445.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_031_000G1_scaffold_658_2
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1546..3045)
DNA (1500bp) protein (500aa)
tagaturonate reductase (EC:1.1.1.58)
Tagaturonate reductase n=1 Tax=Clostridium sp. CAG:7 RepID=R5J5S9_9CLOT
Tagaturonate reductase {ECO:0000313|EMBL:CCY44262.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_031_000G1_scaffold_658_3
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3279..3908)
DNA (630bp) protein (210aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=D4CAU0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFE13365.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
hypothetical protein
L2_031_000G1_scaffold_658_4
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4117..4386)
DNA (270bp) protein (90aa)
30S ribosomal protein S18 n=1 Tax=Clostridium sp. CAG:7 RepID=R5IW13_9CLOT
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
30S ribosomal protein S18
L2_031_000G1_scaffold_658_5
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4429..4905)
DNA (477bp) protein (159aa)
Single-stranded DNA-binding protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ESW7_9FIRM
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
single-strand binding protein
L2_031_000G1_scaffold_658_6
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4953..5240)
DNA (288bp) protein (96aa)
30S ribosomal protein S6 n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6KL02_9CLOT
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
SSU ribosomal protein S6P
L2_031_000G1_scaffold_658_7
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5431..7494)
DNA (2064bp) protein (688aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BM27_9CLOT
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:ERI72873.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
L2_031_000G1_scaffold_658_8
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7512..7730)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ESW5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ61109.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L2_031_000G1_scaffold_658_9
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7801..8808)
DNA (1008bp) protein (336aa)
Oxidoreductase, aldo/keto reductase family protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CTZ2_9CLOT
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:EEG57466.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
aldo/keto reductase
L2_031_000G1_scaffold_658_10
unknown

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comp(8772..8888)
DNA (117bp) protein (39aa)

This feature has no annotations

L2_031_000G1_scaffold_658_11
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8885..9613)
DNA (729bp) protein (243aa)
NAD-dependent protein deacetylase {ECO:0000256|HAMAP-Rule:MF_01968}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01968};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01968}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
NAD-dependent protein deacetylases, SIR2 family (EC:3.5.1.-)
NAD-dependent protein deacetylase n=9 Tax=Clostridium RepID=G5HYK9_9CLOT
L2_031_000G1_scaffold_658_12
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9765..11411)
DNA (1647bp) protein (549aa)
Uncharacterized protein n=6 Tax=Clostridium bolteae RepID=A8RXU2_9CLOT
Peptidoglycan-binding lysin protein {ECO:0000313|EMBL:ENZ45571.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
peptidoglycan-binding lysin domain-containing protein
L2_031_000G1_scaffold_658_13
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11499..11978)
DNA (480bp) protein (160aa)
ATPase n=2 Tax=Clostridium bolteae RepID=N9ZK56_9CLOT
ATPase {ECO:0000313|EMBL:ENZ45572.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
Predicted ATPase of the PP-loop superfamily implicated in cell cycle control
L2_031_000G1_scaffold_658_14
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11975..12649)
DNA (675bp) protein (225aa)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
serine O-acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IW39_9CLOT
L2_031_000G1_scaffold_658_15
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12748..13167)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ESV6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ61100.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L2_031_000G1_scaffold_658_16
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13234..14358)
DNA (1125bp) protein (375aa)
branched-chain amino acid aminotransferase, group II (EC:2.6.1.42)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IKW5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40949.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_031_000G1_scaffold_658_17
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14489..16117)
DNA (1629bp) protein (543aa)
Extracellular solute-binding protein family 1 n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5T6C8_9CLOT
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:CCZ61450.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
ABC transporter substrate-binding protein
L2_031_000G1_scaffold_658_18
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16145..17050)
DNA (906bp) protein (302aa)
Binding-protein-dependent transport system inner membrane component n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TR01_9CLOT
Binding-protein-dependent transport system inner membrane component {ECO:0000313|EMBL:CCZ61451.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
binding-protein-dependent transport system inner membrane protein
L2_031_000G1_scaffold_658_19
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17064..18050)
DNA (987bp) protein (329aa)
ABC transporter permease protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TX71_9CLOT
ABC transporter permease protein {ECO:0000313|EMBL:CCZ61452.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
binding-protein-dependent transport systems inner membrane component
L2_031_000G1_scaffold_658_20
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18256..20469
DNA (2214bp) protein (738aa)
AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5T7A6_9CLOT
AraC family transcriptional regulator {ECO:0000313|EMBL:CCZ61453.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
AraC family transcriptional regulator
L2_031_000G1_scaffold_658_21
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20597..22654
DNA (2058bp) protein (686aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5ICX8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KEZ90991.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
hypothetical protein
L2_031_000G1_scaffold_658_22
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(22880..23227)
DNA (348bp) protein (116aa)
Transcriptional regulator, HxlR family n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y5D0_9FIRM
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:EEF68805.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
transcriptional regulator
L2_031_000G1_scaffold_658_23
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23349..23957
DNA (609bp) protein (203aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HF58_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE99905.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
NADH oxidase
Displaying 23 items

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