ggKbase home page

L2_031_000G1_scaffold_665

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_000G1_scaffold_665_1
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..849)
DNA (849bp) protein (283aa)
D-3-phosphoglycerate dehydrogenase n=1 Tax=Ruminococcus obeum CAG:39 RepID=R7D8D9_9FIRM
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:CDD86083.1}; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
L2_031_000G1_scaffold_665_2
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(873..1802)
DNA (930bp) protein (310aa)
Dihydrodipicolinate synthase n=1 Tax=Clostridium sp. D5 RepID=F0YUC2_9CLOT
Dihydrodipicolinate synthase {ECO:0000313|EMBL:EGB94492.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
dihydrodipicolinate synthetase
L2_031_000G1_scaffold_665_3
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1799..4963)
DNA (3165bp) protein (1055aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YUC1_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB94491.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L2_031_000G1_scaffold_665_4
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4932..6509)
DNA (1578bp) protein (526aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0003119CBB
Two-component response regulator {ECO:0000313|EMBL:EGB94488.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
two component transcriptional regulator, arac family
L2_031_000G1_scaffold_665_5
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6536..8275)
DNA (1740bp) protein (580aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002ED435D
Putative HAMP domain protein {ECO:0000313|EMBL:EGB94487.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L2_031_000G1_scaffold_665_6
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8371..9204)
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002DA6063
Sugar ABC transporter, permease protein {ECO:0000313|EMBL:EGB94486.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
sugar ABC transporter permease
L2_031_000G1_scaffold_665_7
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9204..10079)
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002F7390C
Sugar ABC transporter, permease protein {ECO:0000313|EMBL:EGB94485.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
sugar ABC transporter permease
L2_031_000G1_scaffold_665_8
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10147..11448)
DNA (1302bp) protein (434aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0003059695
Putative sugar ABC transporter, sugar-binding protein {ECO:0000313|EMBL:EGB94490.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L2_031_000G1_scaffold_665_9
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11905..12927)
DNA (1023bp) protein (341aa)
BNR/Asp-box repeat protein n=2 Tax=Clostridiales RepID=A5KM55_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV18933.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
L2_031_000G1_scaffold_665_10
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13313..14401)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=A7B414_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17478.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L2_031_000G1_scaffold_665_11
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14426..15772)
DNA (1347bp) protein (449aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=V8BRU4_RUMGN
Putative ATP synthase F0, A subunit {ECO:0000313|EMBL:EDN77383.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
putative efflux protein, MATE family
L2_031_000G1_scaffold_665_12
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15921..16100)
DNA (180bp) protein (60aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B416_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN45826.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L2_031_000G1_scaffold_665_13
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16343..17821)
DNA (1479bp) protein (493aa)
glpK3; glycerol kinase 1 (EC:2.7.1.30)
Glycerol kinase n=3 Tax=Lachnospiraceae RepID=V8BRQ3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN45827.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L2_031_000G1_scaffold_665_14
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17839..18783)
DNA (945bp) protein (315aa)
transketolase subunit B (EC:2.2.1.1)
Transketolase, C-terminal domain protein n=3 Tax=Lachnospiraceae RepID=A7B418_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN45828.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L2_031_000G1_scaffold_665_15
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18783..19607)
DNA (825bp) protein (275aa)
transketolase subunit A (EC:2.2.1.1)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BQN4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17473.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L2_031_000G1_scaffold_665_16
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19626..21026)
DNA (1401bp) protein (467aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B420_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN45830.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L2_031_000G1_scaffold_665_17
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21247..22254
DNA (1008bp) protein (336aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BSN9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN45831.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
transcriptional regulator, LacI family
L2_031_000G1_scaffold_665_18
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22666..23775)
DNA (1110bp) protein (370aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JZH2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN45833.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
Displaying 18 items

View Taxonomy