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L2_031_000G1_scaffold_765

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_000G1_scaffold_765_1
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18..638)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LTQ5_CLOB8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR33735.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L2_031_000G1_scaffold_765_2
unknown

Not on your lists

comp(825..944)
DNA (120bp) protein (40aa)

This feature has no annotations

L2_031_000G1_scaffold_765_3
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1068..1979)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q5P5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY23221.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L2_031_000G1_scaffold_765_4
unknown

Not on your lists

comp(2198..2365)
DNA (168bp) protein (56aa)

This feature has no annotations

L2_031_000G1_scaffold_765_5
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2507..2866)
DNA (360bp) protein (120aa)
Putative uncharacterized protein n=2 Tax=Clostridium botulinum E RepID=B2V0G9_CLOBA
Uncharacterized protein {ECO:0000313|EMBL:AIY79357.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
hypothetical protein
L2_031_000G1_scaffold_765_6
unknown

Not on your lists

comp(3160..3363)
DNA (204bp) protein (68aa)

This feature has no annotations

L2_031_000G1_scaffold_765_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4084..5481)
DNA (1398bp) protein (466aa)
yfmM; ABC transporter ATP-binding protein YfmM (EC:3.6.3.-)
ATPase component of ABC transporter n=4 Tax=Clostridium butyricum RepID=B1QTJ5_CLOBU
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ENZ34339.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L2_031_000G1_scaffold_765_8
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5754..6713
DNA (960bp) protein (320aa)
K+-dependent Na+/Ca+ exchanger protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KFG6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ95713.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
putative K+-dependent Na+/Ca+ exchanger-like protein
L2_031_000G1_scaffold_765_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6996..8216
DNA (1221bp) protein (407aa)
ilvA; L-threonine dehydratase biosynthetic IlvA (EC:4.3.1.19)
Threonine dehydratase {ECO:0000313|EMBL:KHD16832.1}; EC=4.3.1.19 {ECO:0000313|EMBL:KHD16832.1};; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
UPI0003D5CC56 related cluster n=1 Tax=unknown RepID=UPI0003D5CC56
L2_031_000G1_scaffold_765_10
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8358..9014)
DNA (657bp) protein (219aa)
phosphorylated carbohydrates phosphatase (EC:3.1.3.-)
Phosphorylated carbohydrates phosphatase {ECO:0000313|EMBL:AGX43790.1}; EC=3.1.3.- {ECO:0000313|EMBL:AGX43790.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Phosphorylated carbohydrates phosphatase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MT70_CLOSA
L2_031_000G1_scaffold_765_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9124..10296)
DNA (1173bp) protein (391aa)
Permease n=3 Tax=Clostridium butyricum RepID=B1QTI6_CLOBU
Membrane protein {ECO:0000313|EMBL:KHD16829.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hypothetical protein
L2_031_000G1_scaffold_765_12
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10487..11107)
DNA (621bp) protein (207aa)
Uridine kinase {ECO:0000256|HAMAP-Rule:MF_00551, ECO:0000256|RuleBase:RU003825}; EC=2.7.1.48 {ECO:0000256|HAMAP-Rule:MF_00551, ECO:0000256|RuleBase:RU003825};; Cytidine monophosphokinase {ECO:0000256|HAMAP-Rule:MF_00551}; Uridine monophosphokinase {ECO:0000256|HAMAP-Rule:MF_00551}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
udk; uridine kinase Udk (EC:2.7.1.48)
Uridine kinase n=1 Tax=Clostridium sp. DL-VIII RepID=G7M0R8_9CLOT
L2_031_000G1_scaffold_765_13
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11302..12144)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6UBE7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ56929.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
L2_031_000G1_scaffold_765_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12393..12545
DNA (153bp) protein (51aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QTI2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ34352.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L2_031_000G1_scaffold_765_15
unknown

Not on your lists

comp(12562..12726)
DNA (165bp) protein (55aa)

This feature has no annotations

L2_031_000G1_scaffold_765_16
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12680..12835)
DNA (156bp) protein (52aa)
Putative Conserved domain protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EJK4_9CLOT
Putative Conserved domain protein {ECO:0000313|EMBL:CDG01417.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
hypothetical protein
L2_031_000G1_scaffold_765_17
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13340..14635)
DNA (1296bp) protein (432aa)
hom; homoserine dehydrogenase Hom (EC:1.1.1.3)
Homoserine dehydrogenase Hom {ECO:0000313|EMBL:AGX43804.1}; EC=1.1.1.3 {ECO:0000313|EMBL:AGX43804.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Homoserine dehydrogenase Hom n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MSL7_CLOSA
L2_031_000G1_scaffold_765_18
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14785..15474)
DNA (690bp) protein (230aa)
Putative membrane protein, possible Na+ channel or pump n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U6Q7_9CLOT
Putative membrane protein, possible Na+ channel or pump {ECO:0000313|EMBL:EKQ56977.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
L2_031_000G1_scaffold_765_19
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


15591..16277
DNA (687bp) protein (229aa)
30S ribosomal protein S4 n=1 Tax=Clostridium sp. DL-VIII RepID=G7M0H1_9CLOT
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
rpsD2; 30S ribosomal protein S4 B
L2_031_000G1_scaffold_765_20
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16344..17042
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MSH2_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF57666.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_031_000G1_scaffold_765_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17168..18103
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ALU8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33729.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
protein-tyrosine phosphatase
L2_031_000G1_scaffold_765_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(18225..20024)
DNA (1800bp) protein (600aa)
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12)
UPI0003D5BC2C related cluster n=1 Tax=unknown RepID=UPI0003D5BC2C
Aspartate-tRNA ligase {ECO:0000313|EMBL:ETI91045.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
L2_031_000G1_scaffold_765_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(20158..21411)
DNA (1254bp) protein (418aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hisS; histidine--tRNA ligase HisS (EC:6.1.1.21)
Histidine--tRNA ligase n=3 Tax=Clostridium butyricum RepID=B1R2Q6_CLOBU
L2_031_000G1_scaffold_765_24
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21608..23035)
DNA (1428bp) protein (476aa)
hemZ; oxygen-independent coproporphyrinogen-III oxidase 2 (EC:1.3.99.22)
Oxygen-independent coproporphyrinogen-III oxidase 2 {ECO:0000313|EMBL:AGF56334.1}; EC=1.3.99.22 {ECO:0000313|EMBL:AGF56334.1};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
Oxygen-independent coproporphyrinogen-III oxidase 2 n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MEJ2_9CLOT
L2_031_000G1_scaffold_765_25
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23113..23721)
DNA (609bp) protein (203aa)
Metallo-beta-lactamase family protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UYU2_CLOBO
Metallo-beta-lactamase family protein {ECO:0000313|EMBL:EES49157.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
metallo-beta-lactamase family protein
L2_031_000G1_scaffold_765_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23743..24192)
DNA (450bp) protein (150aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518};; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
UPI0003D65F88 related cluster n=1 Tax=unknown RepID=UPI0003D65F88
D-tyrosyl-tRNA(Tyr) deacylase
L2_031_000G1_scaffold_765_27
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24229..26442)
DNA (2214bp) protein (738aa)
relA; GTP pyrophosphokinase RelA (EC:2.7.6.5)
GTP pyrophosphokinase RelA {ECO:0000313|EMBL:AGX43837.1}; EC=2.7.6.5 {ECO:0000313|EMBL:AGX43837.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
GTP pyrophosphokinase RelA n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MWJ8_CLOSA
L2_031_000G1_scaffold_765_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26733..27251)
DNA (519bp) protein (173aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
apt; adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase n=4 Tax=Clostridium butyricum RepID=B1QTX4_CLOBU
L2_031_000G1_scaffold_765_29
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27313..28194)
DNA (882bp) protein (294aa)
recJ1; single-stranded-DNA-specific exonuclease RecJ (EC:3.1.-.-)
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:AGX43839.1}; EC=3.1.-.- {ECO:0000313|EMBL:AGX43839.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MSS6_CLOSA
L2_031_000G1_scaffold_765_30
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28309..30444)
DNA (2136bp) protein (712aa)
Protein export protein SecD n=2 Tax=Clostridium botulinum B RepID=B2TMZ7_CLOBB
protein export protein SecD
Protein export protein SecD {ECO:0000313|EMBL:ACD22696.1}; Protein-export membrane protein SecD (TC 3.A.5.1.1) {ECO:0000313|EMBL:CDH89950.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
Displaying items 1-30 of 34 in total

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